RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 MOB2Q70IA6 237 aa11.12□□□□□ -0.63
RFX3-207ENST00000449190 DZIP1Q86YF9 867 aaKnown RBP11.12□□□□□ -0.63
RFX3-207ENST00000449190 PLEKHM2Q8IWE5 1019 aa11.12□□□□□ -0.63
RFX3-207ENST00000449190 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.12□□□□□ -0.63
RFX3-207ENST00000449190 PAG1Q9NWQ8 432 aa11.12□□□□□ -0.63
RFX3-207ENST00000449190 COL1A1P02452 1464 aaPredicted RBP11.12□□□□□ -0.63
RFX3-207ENST00000449190 TRIM6-TRIM34B2RNG4 842 aa11.11□□□□□ -0.63
RFX3-207ENST00000449190 TCP10L2B9ZVM9 353 aa11.11□□□□□ -0.63
RFX3-207ENST00000449190 FOXN1O15353 648 aa11.11□□□□□ -0.63
RFX3-207ENST00000449190 IDH1O75874 414 aaKnown RBP11.11□□□□□ -0.63
RFX3-207ENST00000449190 CYP2E1P05181 493 aaPredicted RBP11.11□□□□□ -0.63
RFX3-207ENST00000449190 SLC10A3P09131 477 aa11.11□□□□□ -0.63
RFX3-207ENST00000449190 KIF23Q02241 960 aaPredicted RBP11.11□□□□□ -0.63
RFX3-207ENST00000449190 NBPF12Q5TAG4 269 aaPredicted RBP11.11□□□□□ -0.63
RFX3-207ENST00000449190 ZSCAN25Q6NSZ9 544 aa11.11□□□□□ -0.63
RFX3-207ENST00000449190 PI16Q6UXB8 463 aa11.11□□□□□ -0.63
RFX3-207ENST00000449190 TBC1D9Q6ZT07 1266 aa11.11□□□□□ -0.63
RFX3-207ENST00000449190 FAM83AQ86UY5 434 aa11.11□□□□□ -0.63
RFX3-207ENST00000449190 NOL10Q9BSC4 688 aaKnown RBP11.11□□□□□ -0.63
RFX3-207ENST00000449190 OSBPL3Q9H4L5 887 aa11.11□□□□□ -0.63
RFX3-207ENST00000449190 TMOD2Q9NZR1 351 aa11.11□□□□□ -0.63
RFX3-207ENST00000449190 ANGEL1Q9UNK9 670 aaKnown RBP11.11□□□□□ -0.63
RFX3-207ENST00000449190 CA12O43570 354 aa11.1□□□□□ -0.63
RFX3-207ENST00000449190 USP2O75604 605 aaPredicted RBP11.1□□□□□ -0.63
RFX3-207ENST00000449190 MAP4K4O95819 1239 aaPredicted RBP11.1□□□□□ -0.63
RFX3-207ENST00000449190 PDE4AP27815 886 aa11.1□□□□□ -0.63
RFX3-207ENST00000449190 PRKG1Q13976 671 aa11.1□□□□□ -0.63
RFX3-207ENST00000449190 TMED8Q6PL24 325 aaPredicted RBP11.1□□□□□ -0.63
RFX3-207ENST00000449190 PI4K2BQ8TCG2 481 aa11.1□□□□□ -0.63
RFX3-207ENST00000449190 SLC10A4Q96EP9 437 aa11.1□□□□□ -0.63
RFX3-207ENST00000449190 TEPSINQ96N21 525 aa11.1□□□□□ -0.63
RFX3-207ENST00000449190 ZIC5Q96T25 663 aa11.1□□□□□ -0.63
RFX3-207ENST00000449190 PIH1D3Q9NQM4 214 aaKnown RBP11.1□□□□□ -0.63
RFX3-207ENST00000449190 PRDM10Q9NQV6 1147 aa11.1□□□□□ -0.63
RFX3-207ENST00000449190 DAGLAQ9Y4D2 1042 aa11.1□□□□□ -0.63
RFX3-207ENST00000449190 SALL3Q9BXA9 1300 aa11.09□□□□□ -0.63
RFX3-207ENST00000449190 IREB2P48200 963 aaKnown RBP11.09□□□□□ -0.63
RFX3-207ENST00000449190 RGS3P49796 1198 aa11.09□□□□□ -0.63
RFX3-207ENST00000449190 DIXDC1Q155Q3 683 aa11.09□□□□□ -0.63
RFX3-207ENST00000449190 NAA16Q6N069 864 aaPredicted RBP11.09□□□□□ -0.63
RFX3-207ENST00000449190 CDC42EP5Q6NZY7 148 aa11.09□□□□□ -0.63
RFX3-207ENST00000449190 RASAL3Q86YV0 1011 aa11.09□□□□□ -0.63
RFX3-207ENST00000449190 FAM151AQ8WW52 585 aa11.09□□□□□ -0.63
RFX3-207ENST00000449190 RILPL2Q969X0 211 aa11.09□□□□□ -0.63
RFX3-207ENST00000449190 EVI5LQ96CN4 794 aa11.09□□□□□ -0.63
RFX3-207ENST00000449190 HOOK2Q96ED9 719 aa11.09□□□□□ -0.63
RFX3-207ENST00000449190 CSRNP1Q96S65 589 aa11.09□□□□□ -0.63
RFX3-207ENST00000449190 USP40Q9NVE5 1235 aa11.09□□□□□ -0.63
RFX3-207ENST00000449190 NDUFB9Q9Y6M9 179 aa11.09□□□□□ -0.63
RFX3-207ENST00000449190 BAG3O95817 575 aa11.08□□□□□ -0.64
RFX3-207ENST00000449190 HSPA8P11142 646 aaKnown RBP11.08□□□□□ -0.64
RFX3-207ENST00000449190 CACNB3P54284 484 aa11.08□□□□□ -0.64
RFX3-207ENST00000449190 MECOMQ03112 1051 aa11.08□□□□□ -0.64
RFX3-207ENST00000449190 SLC9C2Q5TAH2 1124 aa11.08□□□□□ -0.64
RFX3-207ENST00000449190 COL13A1Q5TAT6 717 aaPredicted RBP11.08□□□□□ -0.64
RFX3-207ENST00000449190 KBTBD3Q8NAB2 608 aa11.08□□□□□ -0.64
RFX3-207ENST00000449190 FSD1Q9BTV5 496 aa11.08□□□□□ -0.64
RFX3-207ENST00000449190 TMEM39BQ9GZU3 492 aa11.08□□□□□ -0.64
RFX3-207ENST00000449190 TSPYL2Q9H2G4 693 aaPredicted RBP11.08□□□□□ -0.64
RFX3-207ENST00000449190 ANTXR1Q9H6X2 564 aa11.08□□□□□ -0.64
RFX3-207ENST00000449190 GAKO14976 1311 aa11.08□□□□□ -0.64
RFX3-207ENST00000449190 ARAP2Q8WZ64 1704 aa11.07□□□□□ -0.64
RFX3-207ENST00000449190 GPR75-ASB3A0A0A6YYF3 556 aa11.07□□□□□ -0.64
RFX3-207ENST00000449190 ZFYP08048 801 aaPredicted RBP11.07□□□□□ -0.64
RFX3-207ENST00000449190 CYP7A1P22680 504 aa11.07□□□□□ -0.64
RFX3-207ENST00000449190 TM4SF4P48230 202 aa11.07□□□□□ -0.64
RFX3-207ENST00000449190 LBX1P52954 281 aa11.07□□□□□ -0.64
RFX3-207ENST00000449190 MAP3K9P80192 1104 aa11.07□□□□□ -0.64
RFX3-207ENST00000449190 TTC22Q5TAA0 569 aa11.07□□□□□ -0.64
RFX3-207ENST00000449190 SPRYD7Q5W111 196 aa11.07□□□□□ -0.64
RFX3-207ENST00000449190 TICAM2Q86XR7 235 aa11.07□□□□□ -0.64
RFX3-207ENST00000449190 ANKRD13AQ8IZ07 590 aa11.07□□□□□ -0.64
RFX3-207ENST00000449190 MAGEB6Q8N7X4 407 aa11.07□□□□□ -0.64
RFX3-207ENST00000449190 NSUN4Q96CB9 384 aaKnown RBP11.07□□□□□ -0.64
RFX3-207ENST00000449190 EDC3Q96F86 508 aaKnown RBP11.07□□□□□ -0.64
RFX3-207ENST00000449190 KIF12Q96FN5 646 aa11.07□□□□□ -0.64
RFX3-207ENST00000449190 IDI2Q9BXS1 227 aa11.07□□□□□ -0.64
RFX3-207ENST00000449190 BMP2KQ9NSY1 1161 aaPredicted RBP11.07□□□□□ -0.64
RFX3-207ENST00000449190 PAPPA2Q9BXP8 1791 aa11.07□□□□□ -0.64
RFX3-207ENST00000449190 HIP1O00291 1037 aa11.06□□□□□ -0.64
RFX3-207ENST00000449190 RNF113AO15541 343 aaKnown RBP11.06□□□□□ -0.64
RFX3-207ENST00000449190 ENTPD3O75355 529 aa11.06□□□□□ -0.64
RFX3-207ENST00000449190 INHBEP58166 350 aa11.06□□□□□ -0.64
RFX3-207ENST00000449190 DCAF15Q66K64 600 aa11.06□□□□□ -0.64
RFX3-207ENST00000449190 CERS3Q8IU89 383 aa11.06□□□□□ -0.64
RFX3-207ENST00000449190 CDAN1Q8IWY9 1227 aa11.06□□□□□ -0.64
RFX3-207ENST00000449190 RNF186Q9NXI6 227 aa11.06□□□□□ -0.64
RFX3-207ENST00000449190 SAGE1Q9NXZ1 904 aa11.06□□□□□ -0.64
RFX3-207ENST00000449190 FZD1Q9UP38 647 aa11.06□□□□□ -0.64
RFX3-207ENST00000449190 MROH7-TTC4A0A0A0MT08 1334 aa11.06□□□□□ -0.64
RFX3-207ENST00000449190 ZBTB48P10074 688 aaPredicted RBP11.05□□□□□ -0.64
RFX3-207ENST00000449190 PDE6AP16499 860 aa11.05□□□□□ -0.64
RFX3-207ENST00000449190 PLCG2P16885 1265 aa11.05□□□□□ -0.64
RFX3-207ENST00000449190 BTDP43251 543 aa11.05□□□□□ -0.64
RFX3-207ENST00000449190 ZNF384Q8TF68 577 aa11.05□□□□□ -0.64
RFX3-207ENST00000449190 FAM198AQ9UFP1 575 aa11.05□□□□□ -0.64
RFX3-207ENST00000449190 ZNF532Q9HCE3 1301 aa11.05□□□□□ -0.64
RFX3-207ENST00000449190 MAGEB6P1A0A0J9YX57 407 aa11.04□□□□□ -0.64
RFX3-207ENST00000449190 MANSC4A6NHS7 340 aaPredicted RBP11.04□□□□□ -0.64
RFX3-207ENST00000449190 TRPA1O75762 1119 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms