RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 USP26Q9BXU7 913 aa17.47■□□□□ 0.39
SHANK2-210ENST00000449116 RRAGCQ9HB90 399 aa17.47■□□□□ 0.39
SHANK2-210ENST00000449116 FAM198AQ9UFP1 575 aa17.47■□□□□ 0.39
SHANK2-210ENST00000449116 CTNNA3Q9UI47 895 aa17.47■□□□□ 0.39
SHANK2-210ENST00000449116 ASTN2O75129 1339 aaPredicted RBP17.47■□□□□ 0.39
SHANK2-210ENST00000449116 TCP10L2B9ZVM9 353 aa17.46■□□□□ 0.39
SHANK2-210ENST00000449116 ENTPD3O75355 529 aa17.46■□□□□ 0.39
SHANK2-210ENST00000449116 ANGEL2Q5VTE6 544 aaKnown RBP17.46■□□□□ 0.39
SHANK2-210ENST00000449116 APOBEC3FQ8IUX4 373 aaKnown RBP17.46■□□□□ 0.39
SHANK2-210ENST00000449116 OSBPL5Q9H0X9 879 aaPredicted RBP17.46■□□□□ 0.39
SHANK2-210ENST00000449116 UPF2Q9HAU5 1272 aaKnown RBP17.46■□□□□ 0.39
SHANK2-210ENST00000449116 MCM9Q9NXL9 1143 aa17.46■□□□□ 0.39
SHANK2-210ENST00000449116 GGA3Q9NZ52 723 aa17.46■□□□□ 0.39
SHANK2-210ENST00000449116 ARPP21Q9UBL0 812 aaPredicted RBP17.46■□□□□ 0.39
SHANK2-210ENST00000449116 RBM8AQ9Y5S9 174 aaKnown RBP17.46■□□□□ 0.39
SHANK2-210ENST00000449116 FOCADQ5VW36 1801 aa17.46■□□□□ 0.39
SHANK2-210ENST00000449116 CDK5RAP2Q96SN8 1893 aa17.46■□□□□ 0.38
SHANK2-210ENST00000449116 PITPNM2Q9BZ72 1349 aa17.46■□□□□ 0.38
SHANK2-210ENST00000449116 YY1P25490 414 aa17.45■□□□□ 0.38
SHANK2-210ENST00000449116 TNNI2P48788 182 aa17.45■□□□□ 0.38
SHANK2-210ENST00000449116 EAPPQ56P03 285 aaPredicted RBP17.45■□□□□ 0.38
SHANK2-210ENST00000449116 FAM83AQ86UY5 434 aa17.45■□□□□ 0.38
SHANK2-210ENST00000449116 AMOTL1Q8IY63 956 aa17.45■□□□□ 0.38
SHANK2-210ENST00000449116 ZNF526Q8TF50 670 aaPredicted RBP17.45■□□□□ 0.38
SHANK2-210ENST00000449116 ZC3H15Q8WU90 426 aaKnown RBP17.45■□□□□ 0.38
SHANK2-210ENST00000449116 NAV1Q8NEY1 1877 aa17.44■□□□□ 0.38
SHANK2-210ENST00000449116 MCCP23508 829 aa17.44■□□□□ 0.38
SHANK2-210ENST00000449116 TCP10Q12799 353 aa17.44■□□□□ 0.38
SHANK2-210ENST00000449116 NECTIN1Q15223 517 aa17.44■□□□□ 0.38
SHANK2-210ENST00000449116 SBK1Q52WX2 424 aa17.44■□□□□ 0.38
SHANK2-210ENST00000449116 CTR9Q6PD62 1173 aa17.44■□□□□ 0.38
SHANK2-210ENST00000449116 FAM151AQ8WW52 585 aa17.44■□□□□ 0.38
SHANK2-210ENST00000449116 NMRK2Q9NPI5 230 aa17.44■□□□□ 0.38
SHANK2-210ENST00000449116 SAP30BPQ9UHR5 308 aaKnown RBP17.44■□□□□ 0.38
SHANK2-210ENST00000449116 COL2A1P02458 1487 aaPredicted RBP17.44■□□□□ 0.38
SHANK2-210ENST00000449116 CNTNAP1P78357 1384 aa17.43■□□□□ 0.38
SHANK2-210ENST00000449116 USP17L12C9JPN9 530 aa17.43■□□□□ 0.38
SHANK2-210ENST00000449116 USP17L21D6R901 530 aa17.43■□□□□ 0.38
SHANK2-210ENST00000449116 POLR3DP05423 398 aaPredicted RBP17.43■□□□□ 0.38
SHANK2-210ENST00000449116 HSPA4P34932 840 aa17.43■□□□□ 0.38
SHANK2-210ENST00000449116 IMMTQ16891 758 aaKnown RBP17.43■□□□□ 0.38
SHANK2-210ENST00000449116 ZFPM1Q8IX07 1006 aa17.43■□□□□ 0.38
SHANK2-210ENST00000449116 DCPSQ96C86 337 aaKnown RBP17.43■□□□□ 0.38
SHANK2-210ENST00000449116 DHX36Q9H2U1 1008 aaKnown RBP17.43■□□□□ 0.38
SHANK2-210ENST00000449116 PGAP2Q9UHJ9 254 aa17.43■□□□□ 0.38
SHANK2-210ENST00000449116 PALD1Q9ULE6 856 aa17.43■□□□□ 0.38
SHANK2-210ENST00000449116 DDX60LQ5H9U9 1706 aaKnown RBP17.43■□□□□ 0.38
SHANK2-210ENST00000449116 ATRNL1Q5VV63 1379 aa17.42■□□□□ 0.38
SHANK2-210ENST00000449116 MINDY4BA8MYZ0 360 aa17.42■□□□□ 0.38
SHANK2-210ENST00000449116 ZNF213O14771 459 aa17.42■□□□□ 0.38
SHANK2-210ENST00000449116 PPARAQ07869 468 aa17.42■□□□□ 0.38
SHANK2-210ENST00000449116 RASA3Q14644 834 aa17.42■□□□□ 0.38
SHANK2-210ENST00000449116 RNF20Q5VTR2 975 aa17.42■□□□□ 0.38
SHANK2-210ENST00000449116 CREB3L3Q68CJ9 461 aa17.42■□□□□ 0.38
SHANK2-210ENST00000449116 TTC6Q86TZ1 520 aa17.42■□□□□ 0.38
SHANK2-210ENST00000449116 PPP2R3BQ9Y5P8 575 aa17.42■□□□□ 0.38
SHANK2-210ENST00000449116 BAZ2AQ9UIF9 1905 aaKnown RBP17.41■□□□□ 0.38
SHANK2-210ENST00000449116 SLC27A2O14975 620 aa17.41■□□□□ 0.38
SHANK2-210ENST00000449116 HLA-DOAP06340 250 aa17.41■□□□□ 0.38
SHANK2-210ENST00000449116 CYP21A2P08686 494 aa17.41■□□□□ 0.38
SHANK2-210ENST00000449116 CYP2D6P10635 497 aa17.41■□□□□ 0.38
SHANK2-210ENST00000449116 HAND2P61296 217 aa17.41■□□□□ 0.38
SHANK2-210ENST00000449116 C12orf60Q5U649 245 aa17.41■□□□□ 0.38
SHANK2-210ENST00000449116 SH3BP5LQ7L8J4 393 aa17.41■□□□□ 0.38
SHANK2-210ENST00000449116 ZSCAN29Q8IWY8 852 aaPredicted RBP17.41■□□□□ 0.38
SHANK2-210ENST00000449116 TMEM39BQ9GZU3 492 aa17.41■□□□□ 0.38
SHANK2-210ENST00000449116 DEFB129Q9H1M3 183 aa17.41■□□□□ 0.38
SHANK2-210ENST00000449116 SCAF8Q9UPN6 1271 aaKnown RBP17.41■□□□□ 0.38
SHANK2-210ENST00000449116 CYP2D7A0A087X1C5 515 aa17.4■□□□□ 0.38
SHANK2-210ENST00000449116 DDTLA6NHG4 134 aaPredicted RBP17.4■□□□□ 0.38
SHANK2-210ENST00000449116 PLCD1P51178 756 aa17.4■□□□□ 0.38
SHANK2-210ENST00000449116 SLC4A8Q2Y0W8 1093 aa17.4■□□□□ 0.38
SHANK2-210ENST00000449116 SULF1Q8IWU6 871 aa17.4■□□□□ 0.38
SHANK2-210ENST00000449116 KCNB2Q92953 911 aa17.4■□□□□ 0.38
SHANK2-210ENST00000449116 C22orf23Q9BZE7 217 aa17.4■□□□□ 0.38
SHANK2-210ENST00000449116 GPBP1L1Q9HC44 474 aaPredicted RBP17.4■□□□□ 0.38
SHANK2-210ENST00000449116 ANAPC4Q9UJX5 808 aa17.4■□□□□ 0.38
SHANK2-210ENST00000449116 CLEC11AQ9Y240 323 aa17.4■□□□□ 0.38
SHANK2-210ENST00000449116 MYH1P12882 1939 aa17.4■□□□□ 0.38
SHANK2-210ENST00000449116 LAMB1P07942 1786 aa17.39■□□□□ 0.37
SHANK2-210ENST00000449116 SLC3A2P08195 630 aaKnown RBP17.39■□□□□ 0.37
SHANK2-210ENST00000449116 POTEIP0CG38 1075 aa17.39■□□□□ 0.37
SHANK2-210ENST00000449116 POTEJP0CG39 1038 aa17.39■□□□□ 0.37
SHANK2-210ENST00000449116 ZKSCAN1P17029 563 aaPredicted RBP17.39■□□□□ 0.37
SHANK2-210ENST00000449116 LDHDQ86WU2 507 aa17.39■□□□□ 0.37
SHANK2-210ENST00000449116 TEPSINQ96N21 525 aa17.39■□□□□ 0.37
SHANK2-210ENST00000449116 CSRNP1Q96S65 589 aa17.39■□□□□ 0.37
SHANK2-210ENST00000449116 EHD4Q9H223 541 aa17.39■□□□□ 0.37
SHANK2-210ENST00000449116 PI4KBQ9UBF8 816 aa17.39■□□□□ 0.37
SHANK2-210ENST00000449116 ROBO3Q96MS0 1386 aa17.39■□□□□ 0.37
SHANK2-210ENST00000449116 RBM25P49756 843 aaKnown RBP17.38■□□□□ 0.37
SHANK2-210ENST00000449116 EVX2Q03828 476 aa17.38■□□□□ 0.37
SHANK2-210ENST00000449116 CTDSPL2Q05D32 466 aa17.38■□□□□ 0.37
SHANK2-210ENST00000449116 TSGA10IPQ3SY00 556 aa17.38■□□□□ 0.37
SHANK2-210ENST00000449116 KRT26Q7Z3Y9 468 aa17.38■□□□□ 0.37
SHANK2-210ENST00000449116 NBPF3Q9H094 633 aa17.38■□□□□ 0.37
SHANK2-210ENST00000449116 TAOK2Q9UL54 1235 aa17.38■□□□□ 0.37
SHANK2-210ENST00000449116 LAMA4Q16363 1823 aa17.37■□□□□ 0.37
SHANK2-210ENST00000449116 ADM5C9JUS6 153 aa17.37■□□□□ 0.37
SHANK2-210ENST00000449116 SMIM22K7EJ46 135 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms