RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 ADGRA1Q86SQ6 560 aa9.11□□□□□ -0.95
AC004540.1-206ENST00000448056 ZBED3Q96IU2 234 aaPredicted RBP9.11□□□□□ -0.95
AC004540.1-206ENST00000448056 TAF1DQ9H5J8 278 aaPredicted RBP9.11□□□□□ -0.95
AC004540.1-206ENST00000448056 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.11□□□□□ -0.95
AC004540.1-206ENST00000448056 DAGLAQ9Y4D2 1042 aa9.11□□□□□ -0.95
AC004540.1-206ENST00000448056 TIAM2Q8IVF5 1701 aa9.11□□□□□ -0.95
AC004540.1-206ENST00000448056 MROH7-TTC4A0A0A0MT08 1334 aa9.1□□□□□ -0.95
AC004540.1-206ENST00000448056 GAKO14976 1311 aa9.1□□□□□ -0.95
AC004540.1-206ENST00000448056 WNT10BO00744 389 aa9.1□□□□□ -0.95
AC004540.1-206ENST00000448056 PPP4CP60510 307 aa9.1□□□□□ -0.95
AC004540.1-206ENST00000448056 E2F4Q16254 413 aa9.1□□□□□ -0.95
AC004540.1-206ENST00000448056 KIF4BQ2VIQ3 1234 aa9.1□□□□□ -0.95
AC004540.1-206ENST00000448056 NBPF9Q3BBW0 867 aa9.1□□□□□ -0.95
AC004540.1-206ENST00000448056 USP50Q70EL3 339 aaPredicted RBP9.1□□□□□ -0.95
AC004540.1-206ENST00000448056 PNMA8AQ86V59 439 aaPredicted RBP9.1□□□□□ -0.95
AC004540.1-206ENST00000448056 TRPM4Q8TD43 1214 aa9.1□□□□□ -0.95
AC004540.1-206ENST00000448056 NMRK2Q9NPI5 230 aa9.1□□□□□ -0.95
AC004540.1-206ENST00000448056 PSME4Q14997 1843 aa9.1□□□□□ -0.95
AC004540.1-206ENST00000448056 MAGEB6P1A0A0J9YX57 407 aa9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 HIP1O00291 1037 aa9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 BAG3O95817 575 aa9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 CHMLP26374 656 aa9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 BTDP43251 543 aa9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 CAMK2BQ13554 666 aa9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 ZMYM1Q5SVZ6 1142 aa9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 PPP1R15BQ5SWA1 713 aa9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 CDC42EP5Q6NZY7 148 aa9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 MIGA1Q8NAN2 632 aa9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 APPBP2Q92624 585 aa9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 OSBP2Q969R2 916 aa9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 FAM227BQ96M60 508 aa9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 NOL10Q9BSC4 688 aaKnown RBP9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 PUS7LQ9H0K6 701 aaKnown RBP9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 TDRD3Q9H7E2 651 aaKnown RBP9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 GPBP1L1Q9HC44 474 aaPredicted RBP9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 HELLSQ9NRZ9 838 aa9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 USP40Q9NVE5 1235 aa9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 AATFQ9NY61 560 aaKnown RBP eCLIP9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 PGAP2Q9UHJ9 254 aa9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 ZNF646O15015 1829 aaPredicted RBP9.09□□□□□ -0.95
AC004540.1-206ENST00000448056 MYO1BO43795 1136 aa9.08□□□□□ -0.96
AC004540.1-206ENST00000448056 RHBDL3P58872 404 aa9.08□□□□□ -0.96
AC004540.1-206ENST00000448056 DYNLL1P63167 89 aaKnown RBP9.08□□□□□ -0.96
AC004540.1-206ENST00000448056 NMIQ13287 307 aaPredicted RBP9.08□□□□□ -0.96
AC004540.1-206ENST00000448056 MCMDC2Q4G0Z9 681 aa9.08□□□□□ -0.96
AC004540.1-206ENST00000448056 EAPPQ56P03 285 aaPredicted RBP9.08□□□□□ -0.96
AC004540.1-206ENST00000448056 MAMSTRQ6ZN01 415 aa9.08□□□□□ -0.96
AC004540.1-206ENST00000448056 CERS3Q8IU89 383 aa9.08□□□□□ -0.96
AC004540.1-206ENST00000448056 ZNF784Q8NCA9 323 aaPredicted RBP9.08□□□□□ -0.96
AC004540.1-206ENST00000448056 SH3RF3Q8TEJ3 882 aaPredicted RBP9.08□□□□□ -0.96
AC004540.1-206ENST00000448056 ZC3H15Q8WU90 426 aaKnown RBP9.08□□□□□ -0.96
AC004540.1-206ENST00000448056 STRBPQ96SI9 672 aaKnown RBP9.08□□□□□ -0.96
AC004540.1-206ENST00000448056 SEC62Q99442 399 aaKnown RBP9.08□□□□□ -0.96
AC004540.1-206ENST00000448056 RIOK1Q9BRS2 568 aaKnown RBP9.08□□□□□ -0.96
AC004540.1-206ENST00000448056 DIAPH3Q9NSV4 1193 aa9.08□□□□□ -0.96
AC004540.1-206ENST00000448056 ZNF70Q9UC06 446 aaPredicted RBP9.08□□□□□ -0.96
AC004540.1-206ENST00000448056 RFX7Q2KHR2 1363 aa9.08□□□□□ -0.96
AC004540.1-206ENST00000448056 WDR90Q96KV7 1748 aa9.08□□□□□ -0.96
AC004540.1-206ENST00000448056 ASTN2O75129 1339 aaPredicted RBP9.07□□□□□ -0.96
AC004540.1-206ENST00000448056 MYH13Q9UKX3 1938 aa9.07□□□□□ -0.96
AC004540.1-206ENST00000448056 A0A0D9SFI3 127 aa9.07□□□□□ -0.96
AC004540.1-206ENST00000448056 CLRN2A0PK11 232 aa9.07□□□□□ -0.96
AC004540.1-206ENST00000448056 M0R2C6 588 aa9.07□□□□□ -0.96
AC004540.1-206ENST00000448056 MBD4O95243 580 aa9.07□□□□□ -0.96
AC004540.1-206ENST00000448056 ANGEL2Q5VTE6 544 aaKnown RBP9.07□□□□□ -0.96
AC004540.1-206ENST00000448056 CWC27Q6UX04 472 aaKnown RBP9.07□□□□□ -0.96
AC004540.1-206ENST00000448056 PLPP6Q8IY26 295 aa9.07□□□□□ -0.96
AC004540.1-206ENST00000448056 AIDAQ96BJ3 306 aa9.07□□□□□ -0.96
AC004540.1-206ENST00000448056 ARMT1Q9H993 441 aa9.07□□□□□ -0.96
AC004540.1-206ENST00000448056 GPAA1O43292 621 aa9.06□□□□□ -0.96
AC004540.1-206ENST00000448056 CDC45O75419 566 aa9.06□□□□□ -0.96
AC004540.1-206ENST00000448056 WDHD1O75717 1129 aaPredicted RBP9.06□□□□□ -0.96
AC004540.1-206ENST00000448056 CACNB3P54284 484 aa9.06□□□□□ -0.96
AC004540.1-206ENST00000448056 FKBP1CQ5VVH2 108 aa9.06□□□□□ -0.96
AC004540.1-206ENST00000448056 LDHDQ86WU2 507 aa9.06□□□□□ -0.96
AC004540.1-206ENST00000448056 TEX11Q8IYF3 940 aa9.06□□□□□ -0.96
AC004540.1-206ENST00000448056 LCORLQ8N3X6 602 aa9.06□□□□□ -0.96
AC004540.1-206ENST00000448056 TGFBRAP1Q8WUH2 860 aa9.06□□□□□ -0.96
AC004540.1-206ENST00000448056 RUFY2Q8WXA3 655 aa9.06□□□□□ -0.96
AC004540.1-206ENST00000448056 DCPSQ96C86 337 aaKnown RBP9.06□□□□□ -0.96
AC004540.1-206ENST00000448056 IDI2Q9BXS1 227 aa9.06□□□□□ -0.96
AC004540.1-206ENST00000448056 CRNKL1Q9BZJ0 848 aaKnown RBP9.06□□□□□ -0.96
AC004540.1-206ENST00000448056 TMOD2Q9NZR1 351 aa9.06□□□□□ -0.96
AC004540.1-206ENST00000448056 PITPNM2Q9BZ72 1349 aa9.05□□□□□ -0.96
AC004540.1-206ENST00000448056 MYO5AQ9Y4I1 1855 aaKnown RBP9.05□□□□□ -0.96
AC004540.1-206ENST00000448056 TCP10L2B9ZVM9 353 aa9.05□□□□□ -0.96
AC004540.1-206ENST00000448056 PATL2C9JE40 543 aaKnown RBP9.05□□□□□ -0.96
AC004540.1-206ENST00000448056 PRKAB2O43741 272 aa9.05□□□□□ -0.96
AC004540.1-206ENST00000448056 GNAT2P19087 354 aa9.05□□□□□ -0.96
AC004540.1-206ENST00000448056 NFIAQ12857 509 aa9.05□□□□□ -0.96
AC004540.1-206ENST00000448056 CASC1Q6TDU7 716 aa9.05□□□□□ -0.96
AC004540.1-206ENST00000448056 CCDC129Q6ZRS4 1044 aa9.05□□□□□ -0.96
AC004540.1-206ENST00000448056 ZNF589Q86UQ0 364 aaPredicted RBP9.05□□□□□ -0.96
AC004540.1-206ENST00000448056 ZFPM1Q8IX07 1006 aa9.05□□□□□ -0.96
AC004540.1-206ENST00000448056 KCNV2Q8TDN2 545 aa9.05□□□□□ -0.96
AC004540.1-206ENST00000448056 VEZTQ9HBM0 779 aa9.05□□□□□ -0.96
AC004540.1-206ENST00000448056 DDX4Q9NQI0 724 aaKnown RBP9.05□□□□□ -0.96
AC004540.1-206ENST00000448056 GGA3Q9NZ52 723 aa9.05□□□□□ -0.96
AC004540.1-206ENST00000448056 FAM198AQ9UFP1 575 aa9.05□□□□□ -0.96
AC004540.1-206ENST00000448056 SCAF8Q9UPN6 1271 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms