RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 TGFBRAP1Q8WUH2 860 aa23.87■■□□□ 1.41
VRK2-207ENST00000440705 TPCN1Q9ULQ1 816 aa23.87■■□□□ 1.41
VRK2-207ENST00000440705 LTBP3Q9NS15 1303 aa23.86■■□□□ 1.41
VRK2-207ENST00000440705 PRC1O43663 620 aa23.86■■□□□ 1.41
VRK2-207ENST00000440705 SLC3A2P08195 630 aaKnown RBP23.86■■□□□ 1.41
VRK2-207ENST00000440705 DDIT3P35638 169 aa23.86■■□□□ 1.41
VRK2-207ENST00000440705 LRRC2Q9BYS8 371 aa23.86■■□□□ 1.41
VRK2-207ENST00000440705 MCM9Q9NXL9 1143 aa23.86■■□□□ 1.41
VRK2-207ENST00000440705 CHMP5Q9NZZ3 219 aa23.86■■□□□ 1.41
VRK2-207ENST00000440705 CIZ1Q9ULV3 898 aaPredicted RBP23.86■■□□□ 1.41
VRK2-207ENST00000440705 ARFGEF1Q9Y6D6 1849 aa23.86■■□□□ 1.41
VRK2-207ENST00000440705 NEDD4P46934 1319 aa23.86■■□□□ 1.41
VRK2-207ENST00000440705 B4E1Z4 1266 aa23.86■■□□□ 1.41
VRK2-207ENST00000440705 CRKP46108 304 aa23.86■■□□□ 1.41
VRK2-207ENST00000440705 JDP2Q8WYK2 163 aa23.86■■□□□ 1.41
VRK2-207ENST00000440705 BRF1Q92994 677 aa23.86■■□□□ 1.41
VRK2-207ENST00000440705 ZDHHC15Q96MV8 337 aa23.86■■□□□ 1.41
VRK2-207ENST00000440705 NFKBIEO00221 500 aa23.85■■□□□ 1.41
VRK2-207ENST00000440705 VIL1P09327 827 aaKnown RBP23.85■■□□□ 1.41
VRK2-207ENST00000440705 ME3Q16798 604 aa23.85■■□□□ 1.41
VRK2-207ENST00000440705 CHST3Q7LGC8 479 aa23.85■■□□□ 1.41
VRK2-207ENST00000440705 SERPINA10Q9UK55 444 aa23.85■■□□□ 1.41
VRK2-207ENST00000440705 RSBN1LQ6PCB5 846 aaPredicted RBP23.84■■□□□ 1.41
VRK2-207ENST00000440705 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.84■■□□□ 1.41
VRK2-207ENST00000440705 COL4A5P29400 1685 aa23.84■■□□□ 1.41
VRK2-207ENST00000440705 CDK5RAP2Q96SN8 1893 aa23.84■■□□□ 1.41
VRK2-207ENST00000440705 LAMB1P07942 1786 aa23.83■■□□□ 1.41
VRK2-207ENST00000440705 LARGE1O95461 756 aa23.83■■□□□ 1.41
VRK2-207ENST00000440705 FGRP09769 529 aa23.83■■□□□ 1.41
VRK2-207ENST00000440705 ANTXR2P58335 489 aa23.83■■□□□ 1.41
VRK2-207ENST00000440705 TMEM87BQ96K49 555 aa23.83■■□□□ 1.41
VRK2-207ENST00000440705 INCENPQ9NQS7 918 aa23.83■■□□□ 1.41
VRK2-207ENST00000440705 TOMM22Q9NS69 142 aa23.83■■□□□ 1.41
VRK2-207ENST00000440705 CYP2D7A0A087X1C5 515 aa23.83■■□□□ 1.4
VRK2-207ENST00000440705 PSMD14O00487 310 aa23.83■■□□□ 1.4
VRK2-207ENST00000440705 RAD17O75943 681 aa23.83■■□□□ 1.4
VRK2-207ENST00000440705 USP17L8P0C7I0 530 aa23.83■■□□□ 1.4
VRK2-207ENST00000440705 C12orf60Q5U649 245 aa23.83■■□□□ 1.4
VRK2-207ENST00000440705 APOBEC3HQ6NTF7 200 aaKnown RBP23.83■■□□□ 1.4
VRK2-207ENST00000440705 MAPKAPK5Q8IW41 473 aa23.83■■□□□ 1.4
VRK2-207ENST00000440705 FHDC1Q9C0D6 1143 aaPredicted RBP23.83■■□□□ 1.4
VRK2-207ENST00000440705 ZSWIM5Q9P217 1185 aa23.83■■□□□ 1.4
VRK2-207ENST00000440705 TACC3Q9Y6A5 838 aa23.83■■□□□ 1.4
VRK2-207ENST00000440705 NAV1Q8NEY1 1877 aa23.82■■□□□ 1.4
VRK2-207ENST00000440705 KDM4AO75164 1064 aa23.82■■□□□ 1.4
VRK2-207ENST00000440705 RRP12Q5JTH9 1297 aaKnown RBP23.82■■□□□ 1.4
VRK2-207ENST00000440705 CYB5R4Q7L1T6 521 aa23.82■■□□□ 1.4
VRK2-207ENST00000440705 ESR2Q92731 530 aa23.82■■□□□ 1.4
VRK2-207ENST00000440705 MTA3Q9BTC8 594 aa23.82■■□□□ 1.4
VRK2-207ENST00000440705 USP40Q9NVE5 1235 aa23.82■■□□□ 1.4
VRK2-207ENST00000440705 EVCP57679 992 aa23.81■■□□□ 1.4
VRK2-207ENST00000440705 PDE4BQ07343 736 aa23.81■■□□□ 1.4
VRK2-207ENST00000440705 FOCADQ5VW36 1801 aa23.81■■□□□ 1.4
VRK2-207ENST00000440705 FLT1P17948 1338 aa23.81■■□□□ 1.4
VRK2-207ENST00000440705 POLR3DP05423 398 aaPredicted RBP23.8■■□□□ 1.4
VRK2-207ENST00000440705 NT5C2P49902 561 aa23.8■■□□□ 1.4
VRK2-207ENST00000440705 RBM5P52756 815 aaKnown RBP eCLIP23.8■■□□□ 1.4
VRK2-207ENST00000440705 CCDC83Q8IWF9 413 aa23.8■■□□□ 1.4
VRK2-207ENST00000440705 STK11IPQ8N1F8 1099 aa23.8■■□□□ 1.4
VRK2-207ENST00000440705 ZNF274Q96GC6 653 aaPredicted RBP23.8■■□□□ 1.4
VRK2-207ENST00000440705 ANGEL1Q9UNK9 670 aaKnown RBP23.8■■□□□ 1.4
VRK2-207ENST00000440705 ORC4O43929 436 aa23.79■■□□□ 1.4
VRK2-207ENST00000440705 CYP2D6P10635 497 aa23.79■■□□□ 1.4
VRK2-207ENST00000440705 APOBRQ0VD83 1088 aa23.79■■□□□ 1.4
VRK2-207ENST00000440705 SART3Q15020 963 aaKnown RBP23.79■■□□□ 1.4
VRK2-207ENST00000440705 CDC42EP5Q6NZY7 148 aa23.79■■□□□ 1.4
VRK2-207ENST00000440705 AGBL3Q8NEM8 1001 aa23.79■■□□□ 1.4
VRK2-207ENST00000440705 CHMP4CQ96CF2 233 aa23.79■■□□□ 1.4
VRK2-207ENST00000440705 GMLQ99445 158 aa23.79■■□□□ 1.4
VRK2-207ENST00000440705 HDAC9Q9UKV0 1011 aa23.79■■□□□ 1.4
VRK2-207ENST00000440705 CXCL9Q07325 125 aa23.79■■□□□ 1.4
VRK2-207ENST00000440705 NECAB1Q8N987 351 aa23.79■■□□□ 1.4
VRK2-207ENST00000440705 SMIM22K7EJ46 135 aa23.78■■□□□ 1.4
VRK2-207ENST00000440705 WDHD1O75717 1129 aaPredicted RBP23.78■■□□□ 1.4
VRK2-207ENST00000440705 TNIP1Q15025 636 aa23.78■■□□□ 1.4
VRK2-207ENST00000440705 CIAPIN1Q6FI81 312 aa23.78■■□□□ 1.4
VRK2-207ENST00000440705 OGFOD1Q8N543 542 aa23.78■■□□□ 1.4
VRK2-207ENST00000440705 IGDCC4Q8TDY8 1250 aa23.78■■□□□ 1.4
VRK2-207ENST00000440705 SAP30BPQ9UHR5 308 aaKnown RBP23.78■■□□□ 1.4
VRK2-207ENST00000440705 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.78■■□□□ 1.4
VRK2-207ENST00000440705 ROBO3Q96MS0 1386 aa23.78■■□□□ 1.4
VRK2-207ENST00000440705 ADAMTSL1Q8N6G6 1762 aa23.77■■□□□ 1.4
VRK2-207ENST00000440705 GOLGB1Q14789 3259 aaKnown RBP23.77■■□□□ 1.4
VRK2-207ENST00000440705 SH2B2O14492 632 aaPredicted RBP23.77■■□□□ 1.4
VRK2-207ENST00000440705 PFKFB2O60825 505 aa23.77■■□□□ 1.4
VRK2-207ENST00000440705 NKX2-3Q8TAU0 364 aa23.77■■□□□ 1.4
VRK2-207ENST00000440705 GTF3C6Q969F1 213 aa23.77■■□□□ 1.4
VRK2-207ENST00000440705 ZNF287Q9HBT7 754 aa23.77■■□□□ 1.4
VRK2-207ENST00000440705 SMC3Q9UQE7 1217 aa23.77■■□□□ 1.4
VRK2-207ENST00000440705 MYH1P12882 1939 aa23.77■■□□□ 1.4
VRK2-207ENST00000440705 ECM29Q5VYK3 1845 aa23.77■■□□□ 1.4
VRK2-207ENST00000440705 ERICH2A1L162 156 aa23.76■■□□□ 1.39
VRK2-207ENST00000440705 IFIT3O14879 490 aaKnown RBP23.76■■□□□ 1.39
VRK2-207ENST00000440705 LIFRP42702 1097 aa23.76■■□□□ 1.39
VRK2-207ENST00000440705 NUCB2P80303 420 aa23.76■■□□□ 1.39
VRK2-207ENST00000440705 STK3Q13188 491 aa23.76■■□□□ 1.39
VRK2-207ENST00000440705 TMEM67Q5HYA8 995 aa23.76■■□□□ 1.39
VRK2-207ENST00000440705 GPHNQ9NQX3 736 aaPredicted RBP23.76■■□□□ 1.39
VRK2-207ENST00000440705 DDX60LQ5H9U9 1706 aaKnown RBP23.76■■□□□ 1.39
VRK2-207ENST00000440705 RANBP6O60518 1105 aaKnown RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms