RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 PDE1AP54750 535 aa14.3□□□□□ -0.12
HSPG2-206ENST00000439717 PICALMQ13492 652 aa14.3□□□□□ -0.12
HSPG2-206ENST00000439717 UBE3CQ15386 1083 aa14.3□□□□□ -0.12
HSPG2-206ENST00000439717 KBTBD3Q8NAB2 608 aa14.3□□□□□ -0.12
HSPG2-206ENST00000439717 DDX4Q9NQI0 724 aaKnown RBP14.3□□□□□ -0.12
HSPG2-206ENST00000439717 COL2A1P02458 1487 aaPredicted RBP14.3□□□□□ -0.12
HSPG2-206ENST00000439717 MAGEB6P1A0A0J9YX57 407 aa14.29□□□□□ -0.12
HSPG2-206ENST00000439717 SLC10A3P09131 477 aa14.29□□□□□ -0.12
HSPG2-206ENST00000439717 MAP2K2P36507 400 aa14.29□□□□□ -0.12
HSPG2-206ENST00000439717 DYNLL1P63167 89 aaKnown RBP14.29□□□□□ -0.12
HSPG2-206ENST00000439717 NOGQ13253 232 aa14.29□□□□□ -0.12
HSPG2-206ENST00000439717 LRRFIP1Q32MZ4 808 aaKnown RBP14.29□□□□□ -0.12
HSPG2-206ENST00000439717 ZFPM1Q8IX07 1006 aa14.29□□□□□ -0.12
HSPG2-206ENST00000439717 ANKRD13AQ8IZ07 590 aa14.29□□□□□ -0.12
HSPG2-206ENST00000439717 MIGA1Q8NAN2 632 aa14.29□□□□□ -0.12
HSPG2-206ENST00000439717 RIOK1Q9BRS2 568 aaKnown RBP14.29□□□□□ -0.12
HSPG2-206ENST00000439717 OSBPL5Q9H0X9 879 aaPredicted RBP14.29□□□□□ -0.12
HSPG2-206ENST00000439717 ATRNL1Q5VV63 1379 aa14.29□□□□□ -0.12
HSPG2-206ENST00000439717 FAM155AB1AL88 458 aaPredicted RBP14.28□□□□□ -0.12
HSPG2-206ENST00000439717 ZFYP08048 801 aaPredicted RBP14.28□□□□□ -0.12
HSPG2-206ENST00000439717 MAP3K9P80192 1104 aa14.28□□□□□ -0.12
HSPG2-206ENST00000439717 GRM1Q13255 1194 aa14.28□□□□□ -0.12
HSPG2-206ENST00000439717 SH3BP5LQ7L8J4 393 aa14.28□□□□□ -0.12
HSPG2-206ENST00000439717 RASAL3Q86YV0 1011 aa14.28□□□□□ -0.12
HSPG2-206ENST00000439717 ZSCAN29Q8IWY8 852 aaPredicted RBP14.28□□□□□ -0.12
HSPG2-206ENST00000439717 TGFBRAP1Q8WUH2 860 aa14.28□□□□□ -0.12
HSPG2-206ENST00000439717 CSRNP1Q96S65 589 aa14.28□□□□□ -0.12
HSPG2-206ENST00000439717 ZNF341Q9BYN7 854 aa14.28□□□□□ -0.12
HSPG2-206ENST00000439717 DHX36Q9H2U1 1008 aaKnown RBP14.28□□□□□ -0.12
HSPG2-206ENST00000439717 OSBPL3Q9H4L5 887 aa14.28□□□□□ -0.12
HSPG2-206ENST00000439717 FZD1Q9UP38 647 aa14.28□□□□□ -0.12
HSPG2-206ENST00000439717 THSD7BQ9C0I4 1608 aa14.27□□□□□ -0.12
HSPG2-206ENST00000439717 FLT1P17948 1338 aa14.27□□□□□ -0.12
HSPG2-206ENST00000439717 DDTLA6NHG4 134 aaPredicted RBP14.27□□□□□ -0.13
HSPG2-206ENST00000439717 NEFLP07196 543 aa14.27□□□□□ -0.13
HSPG2-206ENST00000439717 MAP3K10Q02779 954 aa14.27□□□□□ -0.13
HSPG2-206ENST00000439717 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.27□□□□□ -0.13
HSPG2-206ENST00000439717 SLC10A4Q96EP9 437 aa14.27□□□□□ -0.13
HSPG2-206ENST00000439717 ZNF112Q9UJU3 913 aa14.27□□□□□ -0.13
HSPG2-206ENST00000439717 RNF113AO15541 343 aaKnown RBP14.26□□□□□ -0.13
HSPG2-206ENST00000439717 TBC1D12O60347 775 aa14.26□□□□□ -0.13
HSPG2-206ENST00000439717 USP5P45974 858 aa14.26□□□□□ -0.13
HSPG2-206ENST00000439717 MAP2K1Q02750 393 aaPredicted RBP14.26□□□□□ -0.13
HSPG2-206ENST00000439717 MIGA2Q7L4E1 593 aa14.26□□□□□ -0.13
HSPG2-206ENST00000439717 TICAM2Q86XR7 235 aa14.26□□□□□ -0.13
HSPG2-206ENST00000439717 MAPKAPK5Q8IW41 473 aa14.26□□□□□ -0.13
HSPG2-206ENST00000439717 PLEKHM2Q8IWE5 1019 aa14.26□□□□□ -0.13
HSPG2-206ENST00000439717 REM2Q8IYK8 340 aaPredicted RBP14.26□□□□□ -0.13
HSPG2-206ENST00000439717 EVI5LQ96CN4 794 aa14.26□□□□□ -0.13
HSPG2-206ENST00000439717 CRNKL1Q9BZJ0 848 aaKnown RBP14.26□□□□□ -0.13
HSPG2-206ENST00000439717 CSADQ9Y600 493 aa14.26□□□□□ -0.13
HSPG2-206ENST00000439717 AOC2O75106 756 aa14.25□□□□□ -0.13
HSPG2-206ENST00000439717 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.25□□□□□ -0.13
HSPG2-206ENST00000439717 APPBP2Q92624 585 aa14.25□□□□□ -0.13
HSPG2-206ENST00000439717 WRNIP1Q96S55 665 aa14.25□□□□□ -0.13
HSPG2-206ENST00000439717 PI4KBQ9UBF8 816 aa14.25□□□□□ -0.13
HSPG2-206ENST00000439717 FOCADQ5VW36 1801 aa14.25□□□□□ -0.13
HSPG2-206ENST00000439717 MYH7P12883 1935 aa14.24□□□□□ -0.13
HSPG2-206ENST00000439717 ZBTB48P10074 688 aaPredicted RBP14.24□□□□□ -0.13
HSPG2-206ENST00000439717 VGLL4Q14135 290 aa14.24□□□□□ -0.13
HSPG2-206ENST00000439717 SPRYD7Q5W111 196 aa14.24□□□□□ -0.13
HSPG2-206ENST00000439717 LCORLQ8N3X6 602 aa14.24□□□□□ -0.13
HSPG2-206ENST00000439717 AIDAQ96BJ3 306 aa14.24□□□□□ -0.13
HSPG2-206ENST00000439717 CLMNQ96JQ2 1002 aa14.24□□□□□ -0.13
HSPG2-206ENST00000439717 FSD1Q9BTV5 496 aa14.24□□□□□ -0.13
HSPG2-206ENST00000439717 HERC5Q9UII4 1024 aaKnown RBP14.24□□□□□ -0.13
HSPG2-206ENST00000439717 AK9Q5TCS8 1911 aa14.23□□□□□ -0.13
HSPG2-206ENST00000439717 MBD4O95243 580 aa14.23□□□□□ -0.13
HSPG2-206ENST00000439717 HLA-DOAP06340 250 aa14.23□□□□□ -0.13
HSPG2-206ENST00000439717 KIF23Q02241 960 aaPredicted RBP14.23□□□□□ -0.13
HSPG2-206ENST00000439717 SLFNL1Q499Z3 407 aa14.23□□□□□ -0.13
HSPG2-206ENST00000439717 NOL9Q5SY16 702 aaKnown RBP14.23□□□□□ -0.13
HSPG2-206ENST00000439717 CENPQQ7L2Z9 268 aaPredicted RBP14.23□□□□□ -0.13
HSPG2-206ENST00000439717 METTL16Q86W50 562 aaKnown RBP14.23□□□□□ -0.13
HSPG2-206ENST00000439717 FOXP4Q8IVH2 680 aaPredicted RBP14.23□□□□□ -0.13
HSPG2-206ENST00000439717 WNK4Q96J92 1243 aa14.23□□□□□ -0.13
HSPG2-206ENST00000439717 PUS7LQ9H0K6 701 aaKnown RBP14.23□□□□□ -0.13
HSPG2-206ENST00000439717 ARMT1Q9H993 441 aa14.23□□□□□ -0.13
HSPG2-206ENST00000439717 ATP8A2Q9NTI2 1148 aa14.23□□□□□ -0.13
HSPG2-206ENST00000439717 CDK5RAP2Q96SN8 1893 aa14.23□□□□□ -0.13
HSPG2-206ENST00000439717 PHF20L1A8MW92 1017 aa14.22□□□□□ -0.13
HSPG2-206ENST00000439717 CHGBP05060 677 aa14.22□□□□□ -0.13
HSPG2-206ENST00000439717 PDE4AP27815 886 aa14.22□□□□□ -0.13
HSPG2-206ENST00000439717 TTC6Q86TZ1 520 aa14.22□□□□□ -0.13
HSPG2-206ENST00000439717 ZKSCAN4Q969J2 545 aaPredicted RBP14.22□□□□□ -0.13
HSPG2-206ENST00000439717 OSBP2Q969R2 916 aa14.22□□□□□ -0.13
HSPG2-206ENST00000439717 ELP3Q9H9T3 547 aa14.22□□□□□ -0.13
HSPG2-206ENST00000439717 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.22□□□□□ -0.13
HSPG2-206ENST00000439717 WBP1LQ9NX94 342 aa14.22□□□□□ -0.13
HSPG2-206ENST00000439717 SAP30BPQ9UHR5 308 aaKnown RBP14.22□□□□□ -0.13
HSPG2-206ENST00000439717 PALD1Q9ULE6 856 aa14.22□□□□□ -0.13
HSPG2-206ENST00000439717 SNCAIPQ9Y6H5 919 aa14.22□□□□□ -0.13
HSPG2-206ENST00000439717 OTOFQ9HC10 1997 aa14.22□□□□□ -0.13
HSPG2-206ENST00000439717 MANSC4A6NHS7 340 aaPredicted RBP14.21□□□□□ -0.13
HSPG2-206ENST00000439717 SPDYE5A6NIY4 337 aa14.21□□□□□ -0.13
HSPG2-206ENST00000439717 TRIM6-TRIM34B2RNG4 842 aa14.21□□□□□ -0.13
HSPG2-206ENST00000439717 CTNND1O60716 968 aaKnown RBP14.21□□□□□ -0.13
HSPG2-206ENST00000439717 INPP5BP32019 993 aa14.21□□□□□ -0.13
HSPG2-206ENST00000439717 INHBEP58166 350 aa14.21□□□□□ -0.13
HSPG2-206ENST00000439717 SREBF2Q12772 1141 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms