RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 NMIQ13287 307 aaPredicted RBP17.78■□□□□ 0.44
CPNE1-215ENST00000437100 TGFBRAP1Q8WUH2 860 aa17.78■□□□□ 0.44
CPNE1-215ENST00000437100 AIDAQ96BJ3 306 aa17.78■□□□□ 0.44
CPNE1-215ENST00000437100 DDX60LQ5H9U9 1706 aaKnown RBP17.78■□□□□ 0.44
CPNE1-215ENST00000437100 FOCADQ5VW36 1801 aa17.77■□□□□ 0.44
CPNE1-215ENST00000437100 HIP1O00291 1037 aa17.77■□□□□ 0.44
CPNE1-215ENST00000437100 TCP10Q12799 353 aa17.77■□□□□ 0.44
CPNE1-215ENST00000437100 PICALMQ13492 652 aa17.77■□□□□ 0.44
CPNE1-215ENST00000437100 NBPF12Q5TAG4 269 aaPredicted RBP17.77■□□□□ 0.44
CPNE1-215ENST00000437100 PRAMEF18Q5VWM3 479 aa17.77■□□□□ 0.44
CPNE1-215ENST00000437100 CST9Q5W186 159 aa17.77■□□□□ 0.44
CPNE1-215ENST00000437100 CRNKL1Q9BZJ0 848 aaKnown RBP17.77■□□□□ 0.44
CPNE1-215ENST00000437100 PRKAB2O43741 272 aa17.76■□□□□ 0.43
CPNE1-215ENST00000437100 CHMLP26374 656 aa17.76■□□□□ 0.43
CPNE1-215ENST00000437100 C1QTNF8P60827 252 aa17.76■□□□□ 0.43
CPNE1-215ENST00000437100 MCMDC2Q4G0Z9 681 aa17.76■□□□□ 0.43
CPNE1-215ENST00000437100 MAPKAPK5Q8IW41 473 aa17.76■□□□□ 0.43
CPNE1-215ENST00000437100 DCP1AQ9NPI6 582 aaPredicted RBP17.76■□□□□ 0.43
CPNE1-215ENST00000437100 CDK5RAP2Q96SN8 1893 aa17.75■□□□□ 0.43
CPNE1-215ENST00000437100 DDTLA6NHG4 134 aaPredicted RBP17.75■□□□□ 0.43
CPNE1-215ENST00000437100 FOXP2O15409 715 aa17.75■□□□□ 0.43
CPNE1-215ENST00000437100 GNAT2P19087 354 aa17.75■□□□□ 0.43
CPNE1-215ENST00000437100 CCDC129Q6ZRS4 1044 aa17.75■□□□□ 0.43
CPNE1-215ENST00000437100 ZNF589Q86UQ0 364 aaPredicted RBP17.75■□□□□ 0.43
CPNE1-215ENST00000437100 SDR42E1Q8WUS8 393 aa17.75■□□□□ 0.43
CPNE1-215ENST00000437100 IL25Q9H293 177 aa17.75■□□□□ 0.43
CPNE1-215ENST00000437100 DIAPH3Q9NSV4 1193 aa17.75■□□□□ 0.43
CPNE1-215ENST00000437100 ATP8A2Q9NTI2 1148 aa17.75■□□□□ 0.43
CPNE1-215ENST00000437100 GSG1L2A8MUP6 293 aa17.74■□□□□ 0.43
CPNE1-215ENST00000437100 CELF2O95319 508 aaKnown RBP17.74■□□□□ 0.43
CPNE1-215ENST00000437100 MAP3K10Q02779 954 aa17.74■□□□□ 0.43
CPNE1-215ENST00000437100 SUPT20HL1Q3ZLR7 823 aa17.74■□□□□ 0.43
CPNE1-215ENST00000437100 GIMAP6Q6P9H5 292 aa17.74■□□□□ 0.43
CPNE1-215ENST00000437100 METTL16Q86W50 562 aaKnown RBP17.74■□□□□ 0.43
CPNE1-215ENST00000437100 EPB41L4AQ9HCS5 686 aaPredicted RBP17.74■□□□□ 0.43
CPNE1-215ENST00000437100 SLC4A4Q9Y6R1 1079 aa17.74■□□□□ 0.43
CPNE1-215ENST00000437100 RAD50Q92878 1312 aa17.73■□□□□ 0.43
CPNE1-215ENST00000437100 AK9Q5TCS8 1911 aa17.73■□□□□ 0.43
CPNE1-215ENST00000437100 USP5P45974 858 aa17.73■□□□□ 0.43
CPNE1-215ENST00000437100 APLP1P51693 650 aa17.73■□□□□ 0.43
CPNE1-215ENST00000437100 FKBP1BP68106 108 aa17.73■□□□□ 0.43
CPNE1-215ENST00000437100 CWC27Q6UX04 472 aaKnown RBP17.73■□□□□ 0.43
CPNE1-215ENST00000437100 DHX36Q9H2U1 1008 aaKnown RBP17.73■□□□□ 0.43
CPNE1-215ENST00000437100 CCDC171Q6TFL3 1326 aa17.72■□□□□ 0.43
CPNE1-215ENST00000437100 PAPPA2Q9BXP8 1791 aa17.72■□□□□ 0.43
CPNE1-215ENST00000437100 MAP3K11Q16584 847 aa17.72■□□□□ 0.43
CPNE1-215ENST00000437100 CSRNP1Q96S65 589 aa17.72■□□□□ 0.43
CPNE1-215ENST00000437100 TRPM7Q96QT4 1865 aa17.71■□□□□ 0.43
CPNE1-215ENST00000437100 SIPA1L1O43166 1804 aa17.71■□□□□ 0.43
CPNE1-215ENST00000437100 TMEM88BA6NKF7 163 aa17.71■□□□□ 0.43
CPNE1-215ENST00000437100 PATL2C9JE40 543 aaKnown RBP17.71■□□□□ 0.43
CPNE1-215ENST00000437100 TBC1D12O60347 775 aa17.71■□□□□ 0.43
CPNE1-215ENST00000437100 NF2P35240 595 aa17.71■□□□□ 0.43
CPNE1-215ENST00000437100 VPS53Q5VIR6 699 aa17.71■□□□□ 0.43
CPNE1-215ENST00000437100 HOOK2Q96ED9 719 aa17.71■□□□□ 0.43
CPNE1-215ENST00000437100 ZNF408Q9H9D4 720 aa17.71■□□□□ 0.43
CPNE1-215ENST00000437100 GBA2Q9HCG7 927 aaPredicted RBP17.71■□□□□ 0.43
CPNE1-215ENST00000437100 SAP30BPQ9UHR5 308 aaKnown RBP17.71■□□□□ 0.43
CPNE1-215ENST00000437100 PALD1Q9ULE6 856 aa17.71■□□□□ 0.43
CPNE1-215ENST00000437100 NAV1Q8NEY1 1877 aa17.7■□□□□ 0.42
CPNE1-215ENST00000437100 SGSM2O43147 1006 aa17.7■□□□□ 0.42
CPNE1-215ENST00000437100 ZSCAN29Q8IWY8 852 aaPredicted RBP17.7■□□□□ 0.42
CPNE1-215ENST00000437100 EHD4Q9H223 541 aa17.7■□□□□ 0.42
CPNE1-215ENST00000437100 DNAJC18Q9H819 358 aa17.7■□□□□ 0.42
CPNE1-215ENST00000437100 CREBZFQ9NS37 354 aa17.7■□□□□ 0.42
CPNE1-215ENST00000437100 MCM9Q9NXL9 1143 aa17.7■□□□□ 0.42
CPNE1-215ENST00000437100 PI4KBQ9UBF8 816 aa17.7■□□□□ 0.42
CPNE1-215ENST00000437100 ZMYM6O95789 1325 aa17.7■□□□□ 0.42
CPNE1-215ENST00000437100 USP2O75604 605 aaPredicted RBP17.69■□□□□ 0.42
CPNE1-215ENST00000437100 HSPD1P10809 573 aaKnown RBP17.69■□□□□ 0.42
CPNE1-215ENST00000437100 HSPA6P17066 643 aa17.69■□□□□ 0.42
CPNE1-215ENST00000437100 PLCD1P51178 756 aa17.69■□□□□ 0.42
CPNE1-215ENST00000437100 MFAP1P55081 439 aaKnown RBP17.69■□□□□ 0.42
CPNE1-215ENST00000437100 EVX2Q03828 476 aa17.69■□□□□ 0.42
CPNE1-215ENST00000437100 GABPAQ06546 454 aa17.69■□□□□ 0.42
CPNE1-215ENST00000437100 ALX1Q15699 326 aa17.69■□□□□ 0.42
CPNE1-215ENST00000437100 SBK1Q52WX2 424 aa17.69■□□□□ 0.42
CPNE1-215ENST00000437100 CTR9Q6PD62 1173 aa17.69■□□□□ 0.42
CPNE1-215ENST00000437100 MOB2Q70IA6 237 aa17.69■□□□□ 0.42
CPNE1-215ENST00000437100 SAPCD2Q86UD0 394 aa17.69■□□□□ 0.42
CPNE1-215ENST00000437100 IFNL3Q8IZI9 196 aa17.69■□□□□ 0.42
CPNE1-215ENST00000437100 RUFY2Q8WXA3 655 aa17.69■□□□□ 0.42
CPNE1-215ENST00000437100 ARPP21Q9UBL0 812 aaPredicted RBP17.69■□□□□ 0.42
CPNE1-215ENST00000437100 ZNF112Q9UJU3 913 aa17.69■□□□□ 0.42
CPNE1-215ENST00000437100 FZD1Q9UP38 647 aa17.69■□□□□ 0.42
CPNE1-215ENST00000437100 TLL2Q9Y6L7 1015 aa17.69■□□□□ 0.42
CPNE1-215ENST00000437100 PHF20L1A8MW92 1017 aa17.68■□□□□ 0.42
CPNE1-215ENST00000437100 CDC45O75419 566 aa17.68■□□□□ 0.42
CPNE1-215ENST00000437100 SLURP2P0DP57 97 aa17.68■□□□□ 0.42
CPNE1-215ENST00000437100 CYP2D6P10635 497 aa17.68■□□□□ 0.42
CPNE1-215ENST00000437100 LDLRAD1Q5T700 205 aa17.68■□□□□ 0.42
CPNE1-215ENST00000437100 C12orf60Q5U649 245 aa17.68■□□□□ 0.42
CPNE1-215ENST00000437100 DCAF15Q66K64 600 aa17.68■□□□□ 0.42
CPNE1-215ENST00000437100 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.68■□□□□ 0.42
CPNE1-215ENST00000437100 KLRG1Q96E93 195 aa17.68■□□□□ 0.42
CPNE1-215ENST00000437100 TAOK2Q9UL54 1235 aa17.68■□□□□ 0.42
CPNE1-215ENST00000437100 ROBO3Q96MS0 1386 aa17.67■□□□□ 0.42
CPNE1-215ENST00000437100 UNCXA6NJT0 531 aa17.67■□□□□ 0.42
CPNE1-215ENST00000437100 USP17L12C9JPN9 530 aa17.67■□□□□ 0.42
CPNE1-215ENST00000437100 USP17L21D6R901 530 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms