RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 STARD3NLO95772 234 aa17.13■□□□□ 0.33
TOP3B-206ENST00000436282 IFIT5Q13325 482 aaKnown RBP17.13■□□□□ 0.33
TOP3B-206ENST00000436282 HLFQ16534 295 aa17.13■□□□□ 0.33
TOP3B-206ENST00000436282 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.13■□□□□ 0.33
TOP3B-206ENST00000436282 LAMB4A4D0S4 1761 aa17.13■□□□□ 0.33
TOP3B-206ENST00000436282 FOXP2O15409 715 aa17.13■□□□□ 0.33
TOP3B-206ENST00000436282 CIAO1O76071 339 aa17.13■□□□□ 0.33
TOP3B-206ENST00000436282 ANTXR2P58335 489 aa17.13■□□□□ 0.33
TOP3B-206ENST00000436282 RESP18Q5W5W9 173 aa17.13■□□□□ 0.33
TOP3B-206ENST00000436282 PI16Q6UXB8 463 aa17.13■□□□□ 0.33
TOP3B-206ENST00000436282 NCOA7Q8NI08 942 aa17.13■□□□□ 0.33
TOP3B-206ENST00000436282 ATG3Q9NT62 314 aa17.13■□□□□ 0.33
TOP3B-206ENST00000436282 WDR19Q8NEZ3 1342 aa17.13■□□□□ 0.33
TOP3B-206ENST00000436282 GNL2Q13823 731 aaKnown RBP17.12■□□□□ 0.33
TOP3B-206ENST00000436282 SCARF1Q14162 830 aa17.12■□□□□ 0.33
TOP3B-206ENST00000436282 PTPAQ15257 358 aa17.12■□□□□ 0.33
TOP3B-206ENST00000436282 METTL16Q86W50 562 aaKnown RBP17.12■□□□□ 0.33
TOP3B-206ENST00000436282 RAB11FIP4Q86YS3 637 aa17.12■□□□□ 0.33
TOP3B-206ENST00000436282 KIFC2Q96AC6 838 aa17.12■□□□□ 0.33
TOP3B-206ENST00000436282 PARP4Q9UKK3 1724 aaKnown RBP17.12■□□□□ 0.33
TOP3B-206ENST00000436282 RALYLQ86SE5 291 aaKnown RBP17.12■□□□□ 0.33
TOP3B-206ENST00000436282 VPS37DQ86XT2 251 aa17.12■□□□□ 0.33
TOP3B-206ENST00000436282 PARD6BQ9BYG5 372 aa17.12■□□□□ 0.33
TOP3B-206ENST00000436282 ZCCHC17Q9NP64 241 aaKnown RBP17.12■□□□□ 0.33
TOP3B-206ENST00000436282 PTPN21Q16825 1174 aa17.11■□□□□ 0.33
TOP3B-206ENST00000436282 JAKMIP3Q5VZ66 844 aa17.11■□□□□ 0.33
TOP3B-206ENST00000436282 GOLGA1Q92805 767 aa17.11■□□□□ 0.33
TOP3B-206ENST00000436282 CCDC34Q96HJ3 373 aa17.11■□□□□ 0.33
TOP3B-206ENST00000436282 FUT8Q9BYC5 575 aa17.11■□□□□ 0.33
TOP3B-206ENST00000436282 FGAP02671 866 aa17.11■□□□□ 0.33
TOP3B-206ENST00000436282 KRBA2Q6ZNG9 492 aa17.11■□□□□ 0.33
TOP3B-206ENST00000436282 TRERF1Q96PN7 1200 aa17.11■□□□□ 0.33
TOP3B-206ENST00000436282 PCCAP05165 728 aaPredicted RBP17.11■□□□□ 0.33
TOP3B-206ENST00000436282 ZAP70P43403 619 aa17.11■□□□□ 0.33
TOP3B-206ENST00000436282 METTL24Q5JXM2 366 aa17.11■□□□□ 0.33
TOP3B-206ENST00000436282 CCDC102BQ68D86 513 aa17.11■□□□□ 0.33
TOP3B-206ENST00000436282 TC2NQ8N9U0 490 aa17.11■□□□□ 0.33
TOP3B-206ENST00000436282 ALG1Q9BT22 464 aa17.11■□□□□ 0.33
TOP3B-206ENST00000436282 FEZ2Q9UHY8 353 aaPredicted RBP17.11■□□□□ 0.33
TOP3B-206ENST00000436282 AKAP2Q9Y2D5 859 aa17.11■□□□□ 0.33
TOP3B-206ENST00000436282 TNS2Q63HR2 1409 aa17.1■□□□□ 0.33
TOP3B-206ENST00000436282 ZFYP08048 801 aaPredicted RBP17.1■□□□□ 0.33
TOP3B-206ENST00000436282 TOGARAM2Q6ZUX3 1019 aa17.1■□□□□ 0.33
TOP3B-206ENST00000436282 PDILTQ8N807 584 aa17.1■□□□□ 0.33
TOP3B-206ENST00000436282 ZBTB38Q8NAP3 1195 aaPredicted RBP17.1■□□□□ 0.33
TOP3B-206ENST00000436282 MAP3K14Q99558 947 aa17.1■□□□□ 0.33
TOP3B-206ENST00000436282 PCDHA5Q9Y5H7 936 aa17.1■□□□□ 0.33
TOP3B-206ENST00000436282 ZMYM6O95789 1325 aa17.1■□□□□ 0.33
TOP3B-206ENST00000436282 XIRP1Q702N8 1843 aaKnown RBP17.1■□□□□ 0.33
TOP3B-206ENST00000436282 CUTAO60888 179 aa17.1■□□□□ 0.33
TOP3B-206ENST00000436282 LONRF3Q496Y0 759 aa17.1■□□□□ 0.33
TOP3B-206ENST00000436282 SPECC1LQ69YQ0 1117 aa17.1■□□□□ 0.33
TOP3B-206ENST00000436282 LDHAL6AQ6ZMR3 332 aa17.1■□□□□ 0.33
TOP3B-206ENST00000436282 FOXP4Q8IVH2 680 aaPredicted RBP17.1■□□□□ 0.33
TOP3B-206ENST00000436282 CNNM3Q8NE01 707 aa17.1■□□□□ 0.33
TOP3B-206ENST00000436282 TEX13AQ9BXU3 409 aaPredicted RBP17.1■□□□□ 0.33
TOP3B-206ENST00000436282 CCDC151A5D8V7 595 aa17.09■□□□□ 0.33
TOP3B-206ENST00000436282 VGLL3A8MV65 326 aa17.09■□□□□ 0.33
TOP3B-206ENST00000436282 PDE4BQ07343 736 aa17.09■□□□□ 0.33
TOP3B-206ENST00000436282 KRT40Q6A162 431 aa17.09■□□□□ 0.33
TOP3B-206ENST00000436282 AK7Q96M32 723 aa17.09■□□□□ 0.33
TOP3B-206ENST00000436282 AIFM3Q96NN9 605 aa17.09■□□□□ 0.33
TOP3B-206ENST00000436282 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.09■□□□□ 0.33
TOP3B-206ENST00000436282 PSD3Q9NYI0 1048 aa17.09■□□□□ 0.33
TOP3B-206ENST00000436282 TXLNAP40222 546 aa17.09■□□□□ 0.33
TOP3B-206ENST00000436282 ELOA2Q8IYF1 753 aaPredicted RBP17.09■□□□□ 0.33
TOP3B-206ENST00000436282 EXOC4Q96A65 974 aa17.09■□□□□ 0.33
TOP3B-206ENST00000436282 DHX58Q96C10 678 aa17.09■□□□□ 0.33
TOP3B-206ENST00000436282 CLIC6Q96NY7 704 aa17.09■□□□□ 0.33
TOP3B-206ENST00000436282 GREM2Q9H772 168 aa17.09■□□□□ 0.33
TOP3B-206ENST00000436282 CNNM1Q9NRU3 951 aa17.09■□□□□ 0.33
TOP3B-206ENST00000436282 CDKL5O76039 1030 aa17.08■□□□□ 0.33
TOP3B-206ENST00000436282 BMP6P22004 513 aa17.08■□□□□ 0.33
TOP3B-206ENST00000436282 ITGA6P23229 1130 aa17.08■□□□□ 0.33
TOP3B-206ENST00000436282 CDC27P30260 824 aa17.08■□□□□ 0.33
TOP3B-206ENST00000436282 BRD3Q15059 726 aa17.08■□□□□ 0.33
TOP3B-206ENST00000436282 ZSCAN26Q16670 478 aa17.08■□□□□ 0.33
TOP3B-206ENST00000436282 GIGYF2Q6Y7W6 1299 aaKnown RBP17.08■□□□□ 0.33
TOP3B-206ENST00000436282 KCNH3Q9ULD8 1083 aa17.08■□□□□ 0.33
TOP3B-206ENST00000436282 TBC1D2BQ9UPU7 963 aa17.08■□□□□ 0.33
TOP3B-206ENST00000436282 MAP3K15Q6ZN16 1313 aa17.08■□□□□ 0.33
TOP3B-206ENST00000436282 TRIM28Q13263 835 aaKnown RBP17.08■□□□□ 0.32
TOP3B-206ENST00000436282 LONRF2Q1L5Z9 754 aa17.08■□□□□ 0.32
TOP3B-206ENST00000436282 ZBTB1Q9Y2K1 713 aa17.08■□□□□ 0.32
TOP3B-206ENST00000436282 ECM29Q5VYK3 1845 aa17.08■□□□□ 0.32
TOP3B-206ENST00000436282 TJP1Q07157 1748 aa17.07■□□□□ 0.32
TOP3B-206ENST00000436282 ZNF213O14771 459 aa17.07■□□□□ 0.32
TOP3B-206ENST00000436282 ZNF18P17022 549 aa17.07■□□□□ 0.32
TOP3B-206ENST00000436282 ADKP55263 362 aaKnown RBP17.07■□□□□ 0.32
TOP3B-206ENST00000436282 NLRP10Q86W26 655 aa17.07■□□□□ 0.32
TOP3B-206ENST00000436282 SLC4A9Q96Q91 983 aa17.07■□□□□ 0.32
TOP3B-206ENST00000436282 TRMT112Q9UI30 125 aaKnown RBP17.07■□□□□ 0.32
TOP3B-206ENST00000436282 HOOK1Q9UJC3 728 aaKnown RBP17.07■□□□□ 0.32
TOP3B-206ENST00000436282 APPBP2Q92624 585 aa17.07■□□□□ 0.32
TOP3B-206ENST00000436282 MAP2K7O14733 419 aa17.07■□□□□ 0.32
TOP3B-206ENST00000436282 METAP2P50579 478 aaKnown RBP eCLIP17.07■□□□□ 0.322e-6■□□□□ 9
TOP3B-206ENST00000436282 MDM2Q00987 491 aaPredicted RBP17.07■□□□□ 0.32
TOP3B-206ENST00000436282 CCDC12Q8WUD4 166 aaPredicted RBP17.07■□□□□ 0.32
TOP3B-206ENST00000436282 PUS7LQ9H0K6 701 aaKnown RBP17.07■□□□□ 0.32
TOP3B-206ENST00000436282 CWC15Q9P013 229 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms