RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 TTC39AQ5SRH9 613 aa21.96■■□□□ 1.11
CPNE1-213ENST00000434795 NOL9Q5SY16 702 aaKnown RBP21.96■■□□□ 1.11
CPNE1-213ENST00000434795 FBXO46Q6PJ61 603 aaPredicted RBP21.96■■□□□ 1.11
CPNE1-213ENST00000434795 LRP2BPQ9P2M1 347 aa21.96■■□□□ 1.11
CPNE1-213ENST00000434795 ATRNL1Q5VV63 1379 aa21.96■■□□□ 1.11
CPNE1-213ENST00000434795 BTBD19C9JJ37 291 aa21.95■■□□□ 1.1
CPNE1-213ENST00000434795 MAP4K4O95819 1239 aaPredicted RBP21.95■■□□□ 1.1
CPNE1-213ENST00000434795 SP3Q02447 781 aa21.95■■□□□ 1.1
CPNE1-213ENST00000434795 CCDC8Q9H0W5 538 aaPredicted RBP21.95■■□□□ 1.1
CPNE1-213ENST00000434795 ZFYVE28Q9HCC9 887 aa21.95■■□□□ 1.1
CPNE1-213ENST00000434795 RFX7Q2KHR2 1363 aa21.95■■□□□ 1.1
CPNE1-213ENST00000434795 OTOFQ9HC10 1997 aa21.94■■□□□ 1.1
CPNE1-213ENST00000434795 CYP2E1P05181 493 aaPredicted RBP21.94■■□□□ 1.1
CPNE1-213ENST00000434795 SLURP2P0DP57 97 aa21.94■■□□□ 1.1
CPNE1-213ENST00000434795 CAP1Q01518 475 aa21.94■■□□□ 1.1
CPNE1-213ENST00000434795 MLLT1Q03111 559 aaPredicted RBP21.94■■□□□ 1.1
CPNE1-213ENST00000434795 PICALMQ13492 652 aa21.94■■□□□ 1.1
CPNE1-213ENST00000434795 TAF1CQ15572 869 aaPredicted RBP21.94■■□□□ 1.1
CPNE1-213ENST00000434795 OTOP1Q7RTM1 612 aa21.94■■□□□ 1.1
CPNE1-213ENST00000434795 ZSCAN29Q8IWY8 852 aaPredicted RBP21.94■■□□□ 1.1
CPNE1-213ENST00000434795 DBNLQ9UJU6 430 aaKnown RBP21.94■■□□□ 1.1
CPNE1-213ENST00000434795 KCNH4Q9UQ05 1017 aa21.94■■□□□ 1.1
CPNE1-213ENST00000434795 MYH2Q9UKX2 1941 aa21.94■■□□□ 1.1
CPNE1-213ENST00000434795 LAMB1P07942 1786 aa21.93■■□□□ 1.1
CPNE1-213ENST00000434795 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.93■■□□□ 1.1
CPNE1-213ENST00000434795 ERO1AQ96HE7 468 aa21.93■■□□□ 1.1
CPNE1-213ENST00000434795 ZCCHC17Q9NP64 241 aaKnown RBP21.93■■□□□ 1.1
CPNE1-213ENST00000434795 ZBTB40Q9NUA8 1239 aa21.93■■□□□ 1.1
CPNE1-213ENST00000434795 RCAN3Q9UKA8 241 aa21.93■■□□□ 1.1
CPNE1-213ENST00000434795 TRIM17Q9Y577 477 aa21.93■■□□□ 1.1
CPNE1-213ENST00000434795 ZAP70P43403 619 aa21.92■■□□□ 1.1
CPNE1-213ENST00000434795 MOGSQ13724 837 aa21.92■■□□□ 1.1
CPNE1-213ENST00000434795 RPAP2Q8IXW5 612 aaPredicted RBP21.92■■□□□ 1.1
CPNE1-213ENST00000434795 CD99L2Q8TCZ2 262 aa21.92■■□□□ 1.1
CPNE1-213ENST00000434795 TLR7Q9NYK1 1049 aaKnown RBP21.92■■□□□ 1.1
CPNE1-213ENST00000434795 EXOC6BQ9Y2D4 811 aa21.92■■□□□ 1.1
CPNE1-213ENST00000434795 COG6Q9Y2V7 657 aa21.92■■□□□ 1.1
CPNE1-213ENST00000434795 CXCL11O14625 94 aa21.91■■□□□ 1.1
CPNE1-213ENST00000434795 TBC1D12O60347 775 aa21.91■■□□□ 1.1
CPNE1-213ENST00000434795 PPP4CP60510 307 aa21.91■■□□□ 1.1
CPNE1-213ENST00000434795 SIRT2Q8IXJ6 389 aa21.91■■□□□ 1.1
CPNE1-213ENST00000434795 TLR2O60603 784 aa21.9■■□□□ 1.1
CPNE1-213ENST00000434795 IGSF3O75054 1194 aa21.9■■□□□ 1.1
CPNE1-213ENST00000434795 SOX10P56693 466 aa21.9■■□□□ 1.1
CPNE1-213ENST00000434795 NAA16Q6N069 864 aaPredicted RBP21.9■■□□□ 1.1
CPNE1-213ENST00000434795 ERC1Q8IUD2 1116 aa21.9■■□□□ 1.1
CPNE1-213ENST00000434795 SCYL3Q8IZE3 742 aa21.9■■□□□ 1.1
CPNE1-213ENST00000434795 PIH1D3Q9NQM4 214 aaKnown RBP21.9■■□□□ 1.1
CPNE1-213ENST00000434795 DDX19BQ9UMR2 479 aa21.9■■□□□ 1.1
CPNE1-213ENST00000434795 PTPN22Q9Y2R2 807 aa21.9■■□□□ 1.1
CPNE1-213ENST00000434795 CTNND1O60716 968 aaKnown RBP21.89■■□□□ 1.09
CPNE1-213ENST00000434795 PTPRAP18433 802 aa21.89■■□□□ 1.09
CPNE1-213ENST00000434795 ANKRD23Q86SG2 305 aa21.89■■□□□ 1.09
CPNE1-213ENST00000434795 SH3RF3Q8TEJ3 882 aaPredicted RBP21.89■■□□□ 1.09
CPNE1-213ENST00000434795 EFCC1Q9HA90 598 aa21.89■■□□□ 1.09
CPNE1-213ENST00000434795 ZHX2Q9Y6X8 837 aa21.89■■□□□ 1.09
CPNE1-213ENST00000434795 HSP90AB4PQ58FF6 505 aa21.88■■□□□ 1.09
CPNE1-213ENST00000434795 ADGRA1Q86SQ6 560 aa21.88■■□□□ 1.09
CPNE1-213ENST00000434795 RHPN1Q8TCX5 695 aa21.88■■□□□ 1.09
CPNE1-213ENST00000434795 OSBPL5Q9H0X9 879 aaPredicted RBP21.88■■□□□ 1.09
CPNE1-213ENST00000434795 AFG3L2Q9Y4W6 797 aa21.88■■□□□ 1.09
CPNE1-213ENST00000434795 AK9Q5TCS8 1911 aa21.87■■□□□ 1.09
CPNE1-213ENST00000434795 BAG3O95817 575 aa21.87■■□□□ 1.09
CPNE1-213ENST00000434795 GPAT2Q6NUI2 795 aa21.87■■□□□ 1.09
CPNE1-213ENST00000434795 TEX11Q8IYF3 940 aa21.87■■□□□ 1.09
CPNE1-213ENST00000434795 PICK1Q9NRD5 415 aa21.87■■□□□ 1.09
CPNE1-213ENST00000434795 AATFQ9NY61 560 aaKnown RBP eCLIP21.87■■□□□ 1.09
CPNE1-213ENST00000434795 PDHXO00330 501 aa21.86■■□□□ 1.09
CPNE1-213ENST00000434795 C17orf99Q6UX52 265 aa21.86■■□□□ 1.09
CPNE1-213ENST00000434795 AACSQ86V21 672 aa21.86■■□□□ 1.09
CPNE1-213ENST00000434795 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.86■■□□□ 1.099e-8■■■■■ 116.8
CPNE1-213ENST00000434795 NOL10Q9BSC4 688 aaKnown RBP21.85■■□□□ 1.09
CPNE1-213ENST00000434795 IL1RAPL2Q9NP60 686 aa21.85■■□□□ 1.09
CPNE1-213ENST00000434795 PLCG2P16885 1265 aa21.84■■□□□ 1.09
CPNE1-213ENST00000434795 PDE3AQ14432 1141 aa21.84■■□□□ 1.09
CPNE1-213ENST00000434795 RRP1BQ14684 758 aaKnown RBP21.84■■□□□ 1.09
CPNE1-213ENST00000434795 ARHGEF6Q15052 776 aa21.84■■□□□ 1.09
CPNE1-213ENST00000434795 C20orf194Q5TEA3 1177 aa21.84■■□□□ 1.09
CPNE1-213ENST00000434795 TGFBRAP1Q8WUH2 860 aa21.84■■□□□ 1.09
CPNE1-213ENST00000434795 CHMP4BQ9H444 224 aaKnown RBP21.84■■□□□ 1.09
CPNE1-213ENST00000434795 ANTXR1Q9H6X2 564 aa21.84■■□□□ 1.09
CPNE1-213ENST00000434795 NDUFB9Q9Y6M9 179 aa21.84■■□□□ 1.09
CPNE1-213ENST00000434795 HTTP42858 3142 aa21.83■■□□□ 1.09
CPNE1-213ENST00000434795 A0A0G2JLL6 359 aaPredicted RBP21.83■■□□□ 1.09
CPNE1-213ENST00000434795 FAM196BA6NMK8 535 aa21.83■■□□□ 1.09
CPNE1-213ENST00000434795 HMMRO75330 724 aa21.83■■□□□ 1.09
CPNE1-213ENST00000434795 CYP7A1P22680 504 aa21.83■■□□□ 1.09
CPNE1-213ENST00000434795 FASTKD5Q7L8L6 764 aaKnown RBP21.83■■□□□ 1.09
CPNE1-213ENST00000434795 PRRT2Q7Z6L0 340 aaPredicted RBP21.83■■□□□ 1.09
CPNE1-213ENST00000434795 DHX36Q9H2U1 1008 aaKnown RBP21.83■■□□□ 1.09
CPNE1-213ENST00000434795 PI4KBQ9UBF8 816 aa21.83■■□□□ 1.09
CPNE1-213ENST00000434795 DYNLL1P63167 89 aaKnown RBP21.82■■□□□ 1.08
CPNE1-213ENST00000434795 LACTBP83111 547 aaPredicted RBP21.82■■□□□ 1.08
CPNE1-213ENST00000434795 METTL16Q86W50 562 aaKnown RBP21.82■■□□□ 1.08
CPNE1-213ENST00000434795 KIF1BPQ96EK5 621 aa21.82■■□□□ 1.08
CPNE1-213ENST00000434795 ARHGAP39Q9C0H5 1083 aa21.82■■□□□ 1.08
CPNE1-213ENST00000434795 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.82■■□□□ 1.08
CPNE1-213ENST00000434795 CPA4Q9UI42 421 aa21.82■■□□□ 1.08
CPNE1-213ENST00000434795 RAB11FIP3O75154 756 aa21.81■■□□□ 1.08
CPNE1-213ENST00000434795 IDH1O75874 414 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 226.4 ms