RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 GNL3LQ9NVN8 582 aaKnown RBP27.62■■■□□ 2.01
PTPRA-207ENST00000431048 FBXO3Q9UK99 471 aa27.62■■■□□ 2.01
PTPRA-207ENST00000431048 PTPRAP18433 802 aa27.61■■■□□ 2.01
PTPRA-207ENST00000431048 FLT3LGP49771 235 aa27.61■■■□□ 2.01
PTPRA-207ENST00000431048 ATG9AQ7Z3C6 839 aa27.61■■■□□ 2.01
PTPRA-207ENST00000431048 PICK1Q9NRD5 415 aa27.61■■■□□ 2.01
PTPRA-207ENST00000431048 AK9Q5TCS8 1911 aa27.61■■■□□ 2.01
PTPRA-207ENST00000431048 MGAMO43451 1857 aa27.6■■■□□ 2.01
PTPRA-207ENST00000431048 SEMA3EO15041 775 aa27.59■■■□□ 2.01
PTPRA-207ENST00000431048 DENND2AQ9ULE3 1009 aa27.59■■■□□ 2.01
PTPRA-207ENST00000431048 EVI5O60447 810 aa27.58■■■□□ 2.01
PTPRA-207ENST00000431048 TFRCP02786 760 aaKnown RBP27.58■■■□□ 2.01
PTPRA-207ENST00000431048 INHAP05111 366 aa27.58■■■□□ 2.01
PTPRA-207ENST00000431048 CRISPLD2Q9H0B8 497 aa27.58■■■□□ 2.01
PTPRA-207ENST00000431048 PAK6Q9NQU5 681 aaPredicted RBP27.58■■■□□ 2.01
PTPRA-207ENST00000431048 CIAO1O76071 339 aa27.57■■■□□ 2
PTPRA-207ENST00000431048 RGS3P49796 1198 aa27.57■■■□□ 2
PTPRA-207ENST00000431048 TNPO2O14787 897 aaKnown RBP27.56■■■□□ 2
PTPRA-207ENST00000431048 CTNND1O60716 968 aaKnown RBP27.56■■■□□ 2
PTPRA-207ENST00000431048 ELNP15502 786 aa27.56■■■□□ 2
PTPRA-207ENST00000431048 ATP2B3Q16720 1220 aa27.56■■■□□ 2
PTPRA-207ENST00000431048 GADL1Q6ZQY3 521 aa27.56■■■□□ 2
PTPRA-207ENST00000431048 SH3BP5LQ7L8J4 393 aa27.56■■■□□ 2
PTPRA-207ENST00000431048 SLC17A8Q8NDX2 589 aa27.56■■■□□ 2
PTPRA-207ENST00000431048 DEFB118Q96PH6 123 aa27.56■■■□□ 2
PTPRA-207ENST00000431048 CEP126Q9P2H0 1117 aa27.56■■■□□ 2
PTPRA-207ENST00000431048 LRRFIP2Q9Y608 721 aaKnown RBP27.56■■■□□ 2
PTPRA-207ENST00000431048 MYH13Q9UKX3 1938 aa27.56■■■□□ 2
PTPRA-207ENST00000431048 GAKO14976 1311 aa27.56■■■□□ 2
PTPRA-207ENST00000431048 ZGPATQ8N5A5 531 aaKnown RBP27.55■■■□□ 2
PTPRA-207ENST00000431048 FAM163AQ96GL9 167 aaPredicted RBP27.55■■■□□ 2
PTPRA-207ENST00000431048 ZNF521Q96K83 1311 aa27.55■■■□□ 2
PTPRA-207ENST00000431048 RFX7Q2KHR2 1363 aa27.54■■■□□ 2
PTPRA-207ENST00000431048 SMCR8Q8TEV9 937 aaPredicted RBP27.53■■■□□ 2
PTPRA-207ENST00000431048 COA7Q96BR5 231 aa27.53■■■□□ 2
PTPRA-207ENST00000431048 AGTPBP1Q9UPW5 1226 aa27.53■■■□□ 2
PTPRA-207ENST00000431048 DLL1O00548 723 aa27.52■■■□□ 2
PTPRA-207ENST00000431048 SLF2Q8IX21 1173 aa27.52■■■□□ 2
PTPRA-207ENST00000431048 DDTLA6NHG4 134 aaPredicted RBP27.51■■□□□ 1.99
PTPRA-207ENST00000431048 SOX1O00570 391 aaPredicted RBP27.51■■□□□ 1.99
PTPRA-207ENST00000431048 ANP32CO43423 234 aa27.51■■□□□ 1.99
PTPRA-207ENST00000431048 PHKA1P46020 1223 aa27.51■■□□□ 1.99
PTPRA-207ENST00000431048 ZSCAN29Q8IWY8 852 aaPredicted RBP27.51■■□□□ 1.99
PTPRA-207ENST00000431048 SSH1Q8WYL5 1049 aa27.51■■□□□ 1.99
PTPRA-207ENST00000431048 STAP2Q9UGK3 403 aa27.51■■□□□ 1.99
PTPRA-207ENST00000431048 TBC1D12O60347 775 aa27.5■■□□□ 1.99
PTPRA-207ENST00000431048 BMP8BP34820 402 aa27.5■■□□□ 1.99
PTPRA-207ENST00000431048 FAM110CQ1W6H9 321 aa27.5■■□□□ 1.99
PTPRA-207ENST00000431048 NECAB2Q7Z6G3 386 aa27.5■■□□□ 1.99
PTPRA-207ENST00000431048 ANKLE1Q8NAG6 615 aa27.5■■□□□ 1.99
PTPRA-207ENST00000431048 PAWRQ96IZ0 340 aaKnown RBP27.5■■□□□ 1.99
PTPRA-207ENST00000431048 LAMA3Q16787 3333 aa27.5■■□□□ 1.99
PTPRA-207ENST00000431048 COL6A3P12111 3177 aa27.5■■□□□ 1.99
PTPRA-207ENST00000431048 A0A0C4DFX4 3053 aa27.49■■□□□ 1.99
PTPRA-207ENST00000431048 PDS5AQ29RF7 1337 aaKnown RBP27.49■■□□□ 1.99
PTPRA-207ENST00000431048 DOCK2Q92608 1830 aa27.49■■□□□ 1.99
PTPRA-207ENST00000431048 IL15P40933 162 aaPredicted RBP27.49■■□□□ 1.99
PTPRA-207ENST00000431048 PNMA3Q9UL41 463 aa27.49■■□□□ 1.99
PTPRA-207ENST00000431048 TRIM75PA6NK02 468 aa27.48■■□□□ 1.99
PTPRA-207ENST00000431048 NPM3O75607 178 aaKnown RBP27.48■■□□□ 1.99
PTPRA-207ENST00000431048 CCDC102BQ68D86 513 aa27.48■■□□□ 1.99
PTPRA-207ENST00000431048 GPR153Q6NV75 609 aa27.48■■□□□ 1.99
PTPRA-207ENST00000431048 ANKRD13CQ8N6S4 541 aa27.48■■□□□ 1.99
PTPRA-207ENST00000431048 PROCA1Q8NCQ7 364 aaPredicted RBP27.48■■□□□ 1.99
PTPRA-207ENST00000431048 GDF15Q99988 308 aa27.48■■□□□ 1.99
PTPRA-207ENST00000431048 SIL1Q9H173 461 aa27.48■■□□□ 1.99
PTPRA-207ENST00000431048 DDX4Q9NQI0 724 aaKnown RBP27.48■■□□□ 1.99
PTPRA-207ENST00000431048 PTPRFP10586 1907 aa27.47■■□□□ 1.99
PTPRA-207ENST00000431048 SPTY2D1Q68D10 685 aaPredicted RBP27.47■■□□□ 1.99
PTPRA-207ENST00000431048 LRCH3Q96II8 777 aa27.47■■□□□ 1.99
PTPRA-207ENST00000431048 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.47■■□□□ 1.996e-7■□□□□ 10.8
PTPRA-207ENST00000431048 PHIPQ8WWQ0 1821 aa27.46■■□□□ 1.99
PTPRA-207ENST00000431048 MYH2Q9UKX2 1941 aa27.46■■□□□ 1.99
PTPRA-207ENST00000431048 SLURP2P0DP57 97 aa27.46■■□□□ 1.99
PTPRA-207ENST00000431048 GCLCP48506 637 aaPredicted RBP27.46■■□□□ 1.99
PTPRA-207ENST00000431048 DZIP1Q86YF9 867 aaKnown RBP27.46■■□□□ 1.99
PTPRA-207ENST00000431048 TBC1D2Q9BYX2 928 aa27.46■■□□□ 1.99
PTPRA-207ENST00000431048 DOCK3Q8IZD9 2030 aa27.45■■□□□ 1.99
PTPRA-207ENST00000431048 TREML2Q5T2D2 321 aa27.45■■□□□ 1.98
PTPRA-207ENST00000431048 FAM9BQ8IZU0 186 aa27.45■■□□□ 1.98
PTPRA-207ENST00000431048 DOCK1Q14185 1865 aa27.44■■□□□ 1.98
PTPRA-207ENST00000431048 GPR75-ASB3A0A0A6YYF3 556 aa27.44■■□□□ 1.98
PTPRA-207ENST00000431048 MAP4K4O95819 1239 aaPredicted RBP27.44■■□□□ 1.98
PTPRA-207ENST00000431048 UBTFL1P0CB47 393 aaPredicted RBP27.44■■□□□ 1.98
PTPRA-207ENST00000431048 BTDP43251 543 aa27.44■■□□□ 1.98
PTPRA-207ENST00000431048 ALDH1L2Q3SY69 923 aa27.44■■□□□ 1.98
PTPRA-207ENST00000431048 OSBPL5Q9H0X9 879 aaPredicted RBP27.44■■□□□ 1.98
PTPRA-207ENST00000431048 COPRSQ9NQ92 184 aa27.44■■□□□ 1.98
PTPRA-207ENST00000431048 GJD2Q9UKL4 321 aa27.44■■□□□ 1.98
PTPRA-207ENST00000431048 TAOK2Q9UL54 1235 aa27.44■■□□□ 1.98
PTPRA-207ENST00000431048 HDAC5Q9UQL6 1122 aa27.44■■□□□ 1.98
PTPRA-207ENST00000431048 E9PSI1 815 aa27.43■■□□□ 1.98
PTPRA-207ENST00000431048 HMGCRP04035 888 aa27.43■■□□□ 1.98
PTPRA-207ENST00000431048 ADORA1P30542 326 aa27.43■■□□□ 1.98
PTPRA-207ENST00000431048 RHBDL3P58872 404 aa27.43■■□□□ 1.98
PTPRA-207ENST00000431048 PICALMQ13492 652 aa27.43■■□□□ 1.98
PTPRA-207ENST00000431048 RASGRF1Q13972 1273 aa27.43■■□□□ 1.98
PTPRA-207ENST00000431048 DIS3LQ8TF46 1054 aaKnown RBP27.43■■□□□ 1.98
PTPRA-207ENST00000431048 ABCF2Q9UG63 623 aa27.43■■□□□ 1.98
PTPRA-207ENST00000431048 MROH7-TTC4A0A0A0MT08 1334 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms