RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 PPP4CP60510 307 aa11.96□□□□□ -0.49
HDAC6-207ENST00000430858 MAP3K12Q12852 859 aa11.96□□□□□ -0.49
HDAC6-207ENST00000430858 PICALMQ13492 652 aa11.96□□□□□ -0.49
HDAC6-207ENST00000430858 ERO1BQ86YB8 467 aa11.96□□□□□ -0.49
HDAC6-207ENST00000430858 DCTPP1Q9H773 170 aa11.96□□□□□ -0.49
HDAC6-207ENST00000430858 AATFQ9NY61 560 aaKnown RBP eCLIP11.96□□□□□ -0.49
HDAC6-207ENST00000430858 ZNF112Q9UJU3 913 aa11.96□□□□□ -0.49
HDAC6-207ENST00000430858 DDTLA6NHG4 134 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-207ENST00000430858 SPDYE5A6NIY4 337 aa11.95□□□□□ -0.5
HDAC6-207ENST00000430858 OTUD7BQ6GQQ9 843 aa11.95□□□□□ -0.5
HDAC6-207ENST00000430858 SH3BP5LQ7L8J4 393 aa11.95□□□□□ -0.5
HDAC6-207ENST00000430858 IFNL1Q8IU54 200 aa11.95□□□□□ -0.5
HDAC6-207ENST00000430858 CERS3Q8IU89 383 aa11.95□□□□□ -0.5
HDAC6-207ENST00000430858 TEX11Q8IYF3 940 aa11.95□□□□□ -0.5
HDAC6-207ENST00000430858 ZKSCAN4Q969J2 545 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-207ENST00000430858 CFHR5Q9BXR6 569 aa11.95□□□□□ -0.5
HDAC6-207ENST00000430858 BCL11AQ9H165 835 aa11.95□□□□□ -0.5
HDAC6-207ENST00000430858 ANTXR1Q9H6X2 564 aa11.95□□□□□ -0.5
HDAC6-207ENST00000430858 SNCAIPQ9Y6H5 919 aa11.95□□□□□ -0.5
HDAC6-207ENST00000430858 NDUFB9Q9Y6M9 179 aa11.95□□□□□ -0.5
HDAC6-207ENST00000430858 AKAP11Q9UKA4 1901 aa11.95□□□□□ -0.5
HDAC6-207ENST00000430858 ATRNL1Q5VV63 1379 aa11.94□□□□□ -0.5
HDAC6-207ENST00000430858 TESPA1A2RU30 521 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-207ENST00000430858 TBC1D12O60347 775 aa11.94□□□□□ -0.5
HDAC6-207ENST00000430858 ATP5JP18859 108 aa11.94□□□□□ -0.5
HDAC6-207ENST00000430858 CYP7A1P22680 504 aa11.94□□□□□ -0.5
HDAC6-207ENST00000430858 INPP5BP32019 993 aa11.94□□□□□ -0.5
HDAC6-207ENST00000430858 GTF2A2P52657 109 aa11.94□□□□□ -0.5
HDAC6-207ENST00000430858 MAP3K10Q02779 954 aa11.94□□□□□ -0.5
HDAC6-207ENST00000430858 NOM1Q5C9Z4 860 aaKnown RBP11.94□□□□□ -0.5
HDAC6-207ENST00000430858 NOL9Q5SY16 702 aaKnown RBP11.94□□□□□ -0.5
HDAC6-207ENST00000430858 ADGRA1Q86SQ6 560 aa11.94□□□□□ -0.5
HDAC6-207ENST00000430858 MAGEB6Q8N7X4 407 aa11.94□□□□□ -0.5
HDAC6-207ENST00000430858 SH3RF3Q8TEJ3 882 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-207ENST00000430858 CNKSR2Q8WXI2 1034 aa11.94□□□□□ -0.5
HDAC6-207ENST00000430858 OTUD5Q96G74 571 aa11.94□□□□□ -0.5
HDAC6-207ENST00000430858 MS4A4AQ96JQ5 239 aa11.94□□□□□ -0.5
HDAC6-207ENST00000430858 CRBNQ96SW2 442 aa11.94□□□□□ -0.5
HDAC6-207ENST00000430858 OSBPL5Q9H0X9 879 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-207ENST00000430858 PCDHB15Q9Y5E8 787 aa11.94□□□□□ -0.5
HDAC6-207ENST00000430858 COL2A1P02458 1487 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-207ENST00000430858 PHF20L1A8MW92 1017 aa11.93□□□□□ -0.5
HDAC6-207ENST00000430858 IGF2BP3O00425 579 aaKnown RBP eCLIP11.93□□□□□ -0.5
HDAC6-207ENST00000430858 TBC1D8O95759 1140 aa11.93□□□□□ -0.5
HDAC6-207ENST00000430858 PPATQ06203 517 aa11.93□□□□□ -0.5
HDAC6-207ENST00000430858 PPIL2Q13356 520 aa11.93□□□□□ -0.5
HDAC6-207ENST00000430858 AAMPQ13685 434 aa11.93□□□□□ -0.5
HDAC6-207ENST00000430858 TGFBRAP1Q8WUH2 860 aa11.93□□□□□ -0.5
HDAC6-207ENST00000430858 DNAJC2Q99543 621 aaKnown RBP11.93□□□□□ -0.5
HDAC6-207ENST00000430858 DHX36Q9H2U1 1008 aaKnown RBP11.93□□□□□ -0.5
HDAC6-207ENST00000430858 BOLA2Q9H3K6 86 aa11.93□□□□□ -0.5
HDAC6-207ENST00000430858 CCL15-CCL14A0A0B4J2E2 113 aa11.92□□□□□ -0.5
HDAC6-207ENST00000430858 GOLIM4O00461 696 aa11.92□□□□□ -0.5
HDAC6-207ENST00000430858 SMARCA5O60264 1052 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-207ENST00000430858 SNAPC2Q13487 334 aa11.92□□□□□ -0.5
HDAC6-207ENST00000430858 CCL15Q16663 113 aa11.92□□□□□ -0.5
HDAC6-207ENST00000430858 SCYL3Q8IZE3 742 aa11.92□□□□□ -0.5
HDAC6-207ENST00000430858 HAUS7Q99871 368 aa11.92□□□□□ -0.5
HDAC6-207ENST00000430858 PI4KBQ9UBF8 816 aa11.92□□□□□ -0.5
HDAC6-207ENST00000430858 OTOFQ9HC10 1997 aa11.92□□□□□ -0.5
HDAC6-207ENST00000430858 MAST2Q6P0Q8 1798 aa11.92□□□□□ -0.5
HDAC6-207ENST00000430858 FLT1P17948 1338 aa11.91□□□□□ -0.5
HDAC6-207ENST00000430858 GPR25O00155 361 aa11.91□□□□□ -0.5
HDAC6-207ENST00000430858 IRF6O14896 467 aa11.91□□□□□ -0.5
HDAC6-207ENST00000430858 CTNND1O60716 968 aaKnown RBP11.91□□□□□ -0.5
HDAC6-207ENST00000430858 CETPP11597 493 aa11.91□□□□□ -0.5
HDAC6-207ENST00000430858 DYNLL1P63167 89 aaKnown RBP11.91□□□□□ -0.5
HDAC6-207ENST00000430858 SLC9C2Q5TAH2 1124 aa11.91□□□□□ -0.5
HDAC6-207ENST00000430858 BRI3BPQ8WY22 251 aa11.91□□□□□ -0.5
HDAC6-207ENST00000430858 GPATCH3Q96I76 525 aa11.91□□□□□ -0.5
HDAC6-207ENST00000430858 PTPN18Q99952 460 aa11.91□□□□□ -0.5
HDAC6-207ENST00000430858 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.91□□□□□ -0.5
HDAC6-207ENST00000430858 PICK1Q9NRD5 415 aa11.91□□□□□ -0.5
HDAC6-207ENST00000430858 ECHDC1Q9NTX5 307 aa11.91□□□□□ -0.5
HDAC6-207ENST00000430858 PAG1Q9NWQ8 432 aa11.91□□□□□ -0.5
HDAC6-207ENST00000430858 HERC5Q9UII4 1024 aaKnown RBP11.91□□□□□ -0.5
HDAC6-207ENST00000430858 PDE6AP16499 860 aa11.9□□□□□ -0.5
HDAC6-207ENST00000430858 MAPKAPK5Q8IW41 473 aa11.9□□□□□ -0.5
HDAC6-207ENST00000430858 MIGA1Q8NAN2 632 aa11.9□□□□□ -0.5
HDAC6-207ENST00000430858 ZNF296Q8WUU4 475 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-207ENST00000430858 EDC3Q96F86 508 aaKnown RBP11.9□□□□□ -0.5
HDAC6-207ENST00000430858 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.9□□□□□ -0.53e-6■■□□□ 12.9
HDAC6-207ENST00000430858 ZCCHC17Q9NP64 241 aaKnown RBP11.9□□□□□ -0.5
HDAC6-207ENST00000430858 KCNH4Q9UQ05 1017 aa11.9□□□□□ -0.5
HDAC6-207ENST00000430858 ZNF532Q9HCE3 1301 aa11.89□□□□□ -0.51
HDAC6-207ENST00000430858 MAGEB6P1A0A0J9YX57 407 aa11.89□□□□□ -0.51
HDAC6-207ENST00000430858 CXCL11O14625 94 aa11.89□□□□□ -0.51
HDAC6-207ENST00000430858 FKTNO75072 461 aa11.89□□□□□ -0.51
HDAC6-207ENST00000430858 HLA-DOAP06340 250 aa11.89□□□□□ -0.51
HDAC6-207ENST00000430858 SLURP2P0DP57 97 aa11.89□□□□□ -0.51
HDAC6-207ENST00000430858 PTPRAP18433 802 aa11.89□□□□□ -0.51
HDAC6-207ENST00000430858 USP5P45974 858 aa11.89□□□□□ -0.51
HDAC6-207ENST00000430858 HDAC1Q13547 482 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-207ENST00000430858 DGKZQ13574 1117 aa11.89□□□□□ -0.51
HDAC6-207ENST00000430858 FOXP4Q8IVH2 680 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-207ENST00000430858 RIOK1Q9BRS2 568 aaKnown RBP11.89□□□□□ -0.51
HDAC6-207ENST00000430858 R3HDMLQ9H3Y0 253 aa11.89□□□□□ -0.51
HDAC6-207ENST00000430858 AK9Q5TCS8 1911 aa11.89□□□□□ -0.51
HDAC6-207ENST00000430858 LAMB1P07942 1786 aa11.89□□□□□ -0.51
HDAC6-207ENST00000430858 TCRBV5S4A2TA0A5A2 114 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms