RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 SART3Q15020 963 aaKnown RBP16.93■□□□□ 0.3
CDK3-201ENST00000425876 GRIPAP1Q4V328 841 aa16.93■□□□□ 0.3
CDK3-201ENST00000425876 FOXD4L5Q5VV16 416 aaPredicted RBP16.93■□□□□ 0.3
CDK3-201ENST00000425876 FOXD4L4Q8WXT5 416 aaPredicted RBP16.93■□□□□ 0.3
CDK3-201ENST00000425876 LMBRD1Q9NUN5 540 aa16.93■□□□□ 0.3
CDK3-201ENST00000425876 MKRN1Q9UHC7 482 aaKnown RBP16.93■□□□□ 0.3
CDK3-201ENST00000425876 GAKO14976 1311 aa16.92■□□□□ 0.3
CDK3-201ENST00000425876 GPR75-ASB3A0A0A6YYF3 556 aa16.92■□□□□ 0.3
CDK3-201ENST00000425876 GOLGA8BA8MQT2 603 aa16.92■□□□□ 0.3
CDK3-201ENST00000425876 USP17L12C9JPN9 530 aa16.92■□□□□ 0.3
CDK3-201ENST00000425876 USP17L21D6R901 530 aa16.92■□□□□ 0.3
CDK3-201ENST00000425876 RIMBP2O15034 1052 aa16.92■□□□□ 0.3
CDK3-201ENST00000425876 PLCG2P16885 1265 aa16.92■□□□□ 0.3
CDK3-201ENST00000425876 POLD1P28340 1107 aa16.92■□□□□ 0.3
CDK3-201ENST00000425876 CCT2P78371 535 aaKnown RBP16.92■□□□□ 0.3
CDK3-201ENST00000425876 TMEM67Q5HYA8 995 aa16.92■□□□□ 0.3
CDK3-201ENST00000425876 OLFM4Q6UX06 510 aa16.92■□□□□ 0.3
CDK3-201ENST00000425876 PODNQ7Z5L7 613 aa16.92■□□□□ 0.3
CDK3-201ENST00000425876 TMTC2Q8N394 836 aa16.92■□□□□ 0.3
CDK3-201ENST00000425876 NKX2-3Q8TAU0 364 aa16.92■□□□□ 0.3
CDK3-201ENST00000425876 ESR2Q92731 530 aa16.92■□□□□ 0.3
CDK3-201ENST00000425876 LY9Q9HBG7 655 aa16.92■□□□□ 0.3
CDK3-201ENST00000425876 INCENPQ9NQS7 918 aa16.92■□□□□ 0.3
CDK3-201ENST00000425876 PTPDC1A2A3K4 754 aa16.91■□□□□ 0.3
CDK3-201ENST00000425876 IFIT3O14879 490 aaKnown RBP16.91■□□□□ 0.3
CDK3-201ENST00000425876 ORC4O43929 436 aa16.91■□□□□ 0.3
CDK3-201ENST00000425876 SLC3A2P08195 630 aaKnown RBP16.91■□□□□ 0.3
CDK3-201ENST00000425876 CHRNA5P30532 468 aa16.91■□□□□ 0.3
CDK3-201ENST00000425876 RCAN1P53805 252 aa16.91■□□□□ 0.3
CDK3-201ENST00000425876 GTF2IP78347 998 aa16.91■□□□□ 0.3
CDK3-201ENST00000425876 GSE1Q14687 1217 aa16.91■□□□□ 0.3
CDK3-201ENST00000425876 DIXDC1Q155Q3 683 aa16.91■□□□□ 0.3
CDK3-201ENST00000425876 APOA5Q6Q788 366 aa16.91■□□□□ 0.3
CDK3-201ENST00000425876 FAM184AQ8NB25 1140 aa16.91■□□□□ 0.3
CDK3-201ENST00000425876 RGS22Q8NE09 1264 aa16.91■□□□□ 0.3
CDK3-201ENST00000425876 NAP1L2Q9ULW6 460 aaPredicted RBP16.91■□□□□ 0.3
CDK3-201ENST00000425876 SLX4Q8IY92 1834 aa16.91■□□□□ 0.3
CDK3-201ENST00000425876 NID2Q14112 1375 aa16.9■□□□□ 0.3
CDK3-201ENST00000425876 VPS37CA5D8V6 355 aaPredicted RBP16.9■□□□□ 0.3
CDK3-201ENST00000425876 KLHL40Q2TBA0 621 aa16.9■□□□□ 0.3
CDK3-201ENST00000425876 NCOA5Q9HCD5 579 aaKnown RBP16.9■□□□□ 0.3
CDK3-201ENST00000425876 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.9■□□□□ 0.3
CDK3-201ENST00000425876 MYH2Q9UKX2 1941 aa16.9■□□□□ 0.3
CDK3-201ENST00000425876 SNED1Q8TER0 1413 aa16.9■□□□□ 0.3
CDK3-201ENST00000425876 BAZ2AQ9UIF9 1905 aaKnown RBP16.9■□□□□ 0.3
CDK3-201ENST00000425876 ERICH2A1L162 156 aa16.89■□□□□ 0.3
CDK3-201ENST00000425876 FKBP1AP62942 108 aaKnown RBP16.89■□□□□ 0.3
CDK3-201ENST00000425876 TMEM87AQ8NBN3 555 aa16.89■□□□□ 0.3
CDK3-201ENST00000425876 SH3RF3Q8TEJ3 882 aaPredicted RBP16.89■□□□□ 0.3
CDK3-201ENST00000425876 FHDC1Q9C0D6 1143 aaPredicted RBP16.89■□□□□ 0.3
CDK3-201ENST00000425876 TOMM22Q9NS69 142 aa16.89■□□□□ 0.3
CDK3-201ENST00000425876 G3V3G9 751 aa16.89■□□□□ 0.29
CDK3-201ENST00000425876 ZBTB43O43298 467 aa16.89■□□□□ 0.29
CDK3-201ENST00000425876 BTDP43251 543 aa16.89■□□□□ 0.29
CDK3-201ENST00000425876 USP5P45974 858 aa16.89■□□□□ 0.29
CDK3-201ENST00000425876 RRP12Q5JTH9 1297 aaKnown RBP16.89■□□□□ 0.29
CDK3-201ENST00000425876 DCAF8Q5TAQ9 597 aa16.89■□□□□ 0.29
CDK3-201ENST00000425876 SUPT20HQ8NEM7 779 aa16.89■□□□□ 0.29
CDK3-201ENST00000425876 LAMB1P07942 1786 aa16.88■□□□□ 0.29
CDK3-201ENST00000425876 CYP2D7A0A087X1C5 515 aa16.88■□□□□ 0.29
CDK3-201ENST00000425876 CCDC69A6NI79 296 aa16.88■□□□□ 0.29
CDK3-201ENST00000425876 PRPF40AO75400 957 aaKnown RBP16.88■□□□□ 0.29
CDK3-201ENST00000425876 CDKL5O76039 1030 aa16.88■□□□□ 0.29
CDK3-201ENST00000425876 METAP2P50579 478 aaKnown RBP eCLIP16.88■□□□□ 0.29
CDK3-201ENST00000425876 PDE4BQ07343 736 aa16.88■□□□□ 0.29
CDK3-201ENST00000425876 WTAPQ15007 396 aa16.88■□□□□ 0.29
CDK3-201ENST00000425876 C12orf60Q5U649 245 aa16.88■□□□□ 0.29
CDK3-201ENST00000425876 SYNE3Q6ZMZ3 975 aa16.88■□□□□ 0.29
CDK3-201ENST00000425876 NFXL1Q6ZNB6 911 aa16.88■□□□□ 0.29
CDK3-201ENST00000425876 CDC37L1Q7L3B6 337 aa16.88■□□□□ 0.29
CDK3-201ENST00000425876 AMOTL1Q8IY63 956 aa16.88■□□□□ 0.29
CDK3-201ENST00000425876 DDX11Q96FC9 970 aa16.88■□□□□ 0.29
CDK3-201ENST00000425876 UBAC1Q9BSL1 405 aa16.88■□□□□ 0.29
CDK3-201ENST00000425876 MCM9Q9NXL9 1143 aa16.88■□□□□ 0.29
CDK3-201ENST00000425876 SLC12A7Q9Y666 1083 aa16.88■□□□□ 0.29
CDK3-201ENST00000425876 DLEC1Q9Y238 1755 aa16.87■□□□□ 0.29
CDK3-201ENST00000425876 ROBO3Q96MS0 1386 aa16.87■□□□□ 0.29
CDK3-201ENST00000425876 CPLX1O14810 134 aa16.87■□□□□ 0.29
CDK3-201ENST00000425876 DTNBO60941 627 aa16.87■□□□□ 0.29
CDK3-201ENST00000425876 SEC23AQ15436 765 aa16.87■□□□□ 0.29
CDK3-201ENST00000425876 DOK7Q18PE1 504 aa16.87■□□□□ 0.29
CDK3-201ENST00000425876 CPLX2Q6PUV4 134 aaKnown RBP16.87■□□□□ 0.29
CDK3-201ENST00000425876 KLHL34Q8N239 644 aa16.87■□□□□ 0.29
CDK3-201ENST00000425876 ZSCAN16Q9H4T2 348 aaPredicted RBP16.87■□□□□ 0.29
CDK3-201ENST00000425876 DDX49Q9Y6V7 483 aaKnown RBP16.87■□□□□ 0.29
CDK3-201ENST00000425876 GOLGB1Q14789 3259 aaKnown RBP16.86■□□□□ 0.29
CDK3-201ENST00000425876 H3BQV1 296 aa16.86■□□□□ 0.29
CDK3-201ENST00000425876 FDPSP14324 419 aaKnown RBP16.86■□□□□ 0.29
CDK3-201ENST00000425876 RHBDL3P58872 404 aa16.86■□□□□ 0.29
CDK3-201ENST00000425876 PPP2R5BQ15173 497 aa16.86■□□□□ 0.29
CDK3-201ENST00000425876 CSPP1Q1MSJ5 1256 aa16.86■□□□□ 0.29
CDK3-201ENST00000425876 IFFO2Q5TF58 517 aa16.86■□□□□ 0.29
CDK3-201ENST00000425876 STRIP1Q5VSL9 837 aa16.86■□□□□ 0.29
CDK3-201ENST00000425876 IQCA1Q86XH1 822 aa16.86■□□□□ 0.29
CDK3-201ENST00000425876 CERS5Q8N5B7 392 aa16.86■□□□□ 0.29
CDK3-201ENST00000425876 TTLL6Q8N841 843 aa16.86■□□□□ 0.29
CDK3-201ENST00000425876 MRIQ9BWK5 157 aa16.86■□□□□ 0.29
CDK3-201ENST00000425876 SENP2Q9HC62 589 aa16.86■□□□□ 0.29
CDK3-201ENST00000425876 SMIM22K7EJ46 135 aa16.85■□□□□ 0.29
CDK3-201ENST00000425876 MBD3O95983 291 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms