RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 POTEIP0CG38 1075 aa28.86■■■□□ 2.21
APOE-202ENST00000425718 POTEJP0CG39 1038 aa28.86■■■□□ 2.21
APOE-202ENST00000425718 NF2P35240 595 aa28.86■■■□□ 2.21
APOE-202ENST00000425718 RASA3Q14644 834 aa28.86■■■□□ 2.21
APOE-202ENST00000425718 SUPT20HL1Q3ZLR7 823 aa28.86■■■□□ 2.21
APOE-202ENST00000425718 SLFNL1Q499Z3 407 aa28.86■■■□□ 2.21
APOE-202ENST00000425718 BAZ2AQ9UIF9 1905 aaKnown RBP28.86■■■□□ 2.21
APOE-202ENST00000425718 CHGBP05060 677 aa28.85■■■□□ 2.21
APOE-202ENST00000425718 PICALMQ13492 652 aa28.85■■■□□ 2.21
APOE-202ENST00000425718 MAP1SQ66K74 1059 aaPredicted RBP28.85■■■□□ 2.21
APOE-202ENST00000425718 SEC62Q99442 399 aaKnown RBP28.85■■■□□ 2.21
APOE-202ENST00000425718 OSBPL5Q9H0X9 879 aaPredicted RBP28.85■■■□□ 2.21
APOE-202ENST00000425718 FAM198AQ9UFP1 575 aa28.85■■■□□ 2.21
APOE-202ENST00000425718 TAOK2Q9UL54 1235 aa28.85■■■□□ 2.21
APOE-202ENST00000425718 FLT1P17948 1338 aa28.85■■■□□ 2.21
APOE-202ENST00000425718 PATL2C9JE40 543 aaKnown RBP28.84■■■□□ 2.21
APOE-202ENST00000425718 CACNB3P54284 484 aa28.84■■■□□ 2.21
APOE-202ENST00000425718 NFIAQ12857 509 aa28.84■■■□□ 2.21
APOE-202ENST00000425718 USP48Q86UV5 1035 aa28.83■■■□□ 2.21
APOE-202ENST00000425718 ATRNL1Q5VV63 1379 aa28.83■■■□□ 2.21
APOE-202ENST00000425718 HLA-DOAP06340 250 aa28.82■■■□□ 2.2
APOE-202ENST00000425718 TCP10Q12799 353 aa28.82■■■□□ 2.2
APOE-202ENST00000425718 TTC6Q86TZ1 520 aa28.82■■■□□ 2.2
APOE-202ENST00000425718 MAPKAPK5Q8IW41 473 aa28.82■■■□□ 2.2
APOE-202ENST00000425718 ZSCAN29Q8IWY8 852 aaPredicted RBP28.82■■■□□ 2.2
APOE-202ENST00000425718 GLIS2Q9BZE0 524 aaPredicted RBP28.82■■■□□ 2.2
APOE-202ENST00000425718 CNTNAP1P78357 1384 aa28.82■■■□□ 2.2
APOE-202ENST00000425718 DDX60LQ5H9U9 1706 aaKnown RBP28.81■■■□□ 2.2
APOE-202ENST00000425718 SGSM2O43147 1006 aa28.81■■■□□ 2.2
APOE-202ENST00000425718 APPP05067 770 aa28.81■■■□□ 2.2
APOE-202ENST00000425718 KIAA1211Q6ZU35 1233 aa28.81■■■□□ 2.2
APOE-202ENST00000425718 DCP1AQ9NPI6 582 aaPredicted RBP28.81■■■□□ 2.2
APOE-202ENST00000425718 DDX4Q9NQI0 724 aaKnown RBP28.81■■■□□ 2.2
APOE-202ENST00000425718 ARPP21Q9UBL0 812 aaPredicted RBP28.81■■■□□ 2.2
APOE-202ENST00000425718 SDR42E1Q8WUS8 393 aa28.8■■■□□ 2.2
APOE-202ENST00000425718 ZMYM6O95789 1325 aa28.79■■■□□ 2.2
APOE-202ENST00000425718 ADM5C9JUS6 153 aa28.79■■■□□ 2.2
APOE-202ENST00000425718 TDO2P48775 406 aa28.79■■■□□ 2.2
APOE-202ENST00000425718 ALX1Q15699 326 aa28.79■■■□□ 2.2
APOE-202ENST00000425718 DCAF15Q66K64 600 aa28.79■■■□□ 2.2
APOE-202ENST00000425718 ESYT1Q9BSJ8 1104 aa28.79■■■□□ 2.2
APOE-202ENST00000425718 DSCC1Q9BVC3 393 aa28.79■■■□□ 2.2
APOE-202ENST00000425718 TMEM39BQ9GZU3 492 aa28.79■■■□□ 2.2
APOE-202ENST00000425718 MCM9Q9NXL9 1143 aa28.79■■■□□ 2.2
APOE-202ENST00000425718 PI4KBQ9UBF8 816 aa28.79■■■□□ 2.2
APOE-202ENST00000425718 MKRN1Q9UHC7 482 aaKnown RBP28.79■■■□□ 2.2
APOE-202ENST00000425718 LAMB1P07942 1786 aa28.79■■■□□ 2.2
APOE-202ENST00000425718 MYH8P13535 1937 aa28.79■■■□□ 2.2
APOE-202ENST00000425718 GSG1L2A8MUP6 293 aa28.78■■■□□ 2.2
APOE-202ENST00000425718 POLR3DP05423 398 aaPredicted RBP28.78■■■□□ 2.2
APOE-202ENST00000425718 CCDC129Q6ZRS4 1044 aa28.78■■■□□ 2.2
APOE-202ENST00000425718 ZNF589Q86UQ0 364 aaPredicted RBP28.78■■■□□ 2.2
APOE-202ENST00000425718 CDCA5Q96FF9 252 aa28.78■■■□□ 2.2
APOE-202ENST00000425718 CSRNP1Q96S65 589 aa28.78■■■□□ 2.2
APOE-202ENST00000425718 NAPBQ9H115 298 aa28.78■■■□□ 2.2
APOE-202ENST00000425718 ITGBL1O95965 494 aaPredicted RBP28.77■■■□□ 2.2
APOE-202ENST00000425718 HSPD1P10809 573 aaKnown RBP28.77■■■□□ 2.2
APOE-202ENST00000425718 IFNL3Q8IZI9 196 aa28.77■■■□□ 2.2
APOE-202ENST00000425718 CTNNA3Q9UI47 895 aa28.77■■■□□ 2.2
APOE-202ENST00000425718 PRKAB2O43741 272 aa28.76■■■□□ 2.19
APOE-202ENST00000425718 SBK1Q52WX2 424 aa28.76■■■□□ 2.19
APOE-202ENST00000425718 TEPSINQ96N21 525 aa28.76■■■□□ 2.19
APOE-202ENST00000425718 TRIM34Q9BYJ4 488 aa28.76■■■□□ 2.19
APOE-202ENST00000425718 PPP1R12BO60237 982 aaPredicted RBP28.75■■■□□ 2.19
APOE-202ENST00000425718 FKBP1BP68106 108 aa28.75■■■□□ 2.19
APOE-202ENST00000425718 FOXP4Q8IVH2 680 aaPredicted RBP28.75■■■□□ 2.19
APOE-202ENST00000425718 EHD4Q9H223 541 aa28.75■■■□□ 2.19
APOE-202ENST00000425718 HERC5Q9UII4 1024 aaKnown RBP28.75■■■□□ 2.19
APOE-202ENST00000425718 TBC1D12O60347 775 aa28.74■■■□□ 2.19
APOE-202ENST00000425718 REC8O95072 547 aa28.74■■■□□ 2.19
APOE-202ENST00000425718 SLC3A2P08195 630 aaKnown RBP28.74■■■□□ 2.19
APOE-202ENST00000425718 PASKQ96RG2 1323 aa28.73■■■□□ 2.19
APOE-202ENST00000425718 PAPPA2Q9BXP8 1791 aa28.73■■■□□ 2.19
APOE-202ENST00000425718 ZNF287Q9HBT7 754 aa28.73■■■□□ 2.19
APOE-202ENST00000425718 SAP30BPQ9UHR5 308 aaKnown RBP28.73■■■□□ 2.19
APOE-202ENST00000425718 PALD1Q9ULE6 856 aa28.73■■■□□ 2.19
APOE-202ENST00000425718 LAMA4Q16363 1823 aa28.73■■■□□ 2.19
APOE-202ENST00000425718 DDTLA6NHG4 134 aaPredicted RBP28.72■■■□□ 2.19
APOE-202ENST00000425718 EPB41L2O43491 1005 aaKnown RBP28.72■■■□□ 2.19
APOE-202ENST00000425718 NBPF12Q5TAG4 269 aaPredicted RBP28.72■■■□□ 2.19
APOE-202ENST00000425718 ARMC9Q7Z3E5 817 aa28.72■■■□□ 2.19
APOE-202ENST00000425718 ZFPM1Q8IX07 1006 aa28.72■■■□□ 2.19
APOE-202ENST00000425718 CRACR2BQ8N4Y2 399 aaPredicted RBP28.72■■■□□ 2.19
APOE-202ENST00000425718 SCAF8Q9UPN6 1271 aaKnown RBP28.72■■■□□ 2.19
APOE-202ENST00000425718 UNCXA6NJT0 531 aa28.71■■■□□ 2.19
APOE-202ENST00000425718 USP17L12C9JPN9 530 aa28.71■■■□□ 2.19
APOE-202ENST00000425718 USP17L21D6R901 530 aa28.71■■■□□ 2.19
APOE-202ENST00000425718 C12orf60Q5U649 245 aa28.71■■■□□ 2.19
APOE-202ENST00000425718 C2orf69Q8N8R5 385 aa28.71■■■□□ 2.19
APOE-202ENST00000425718 ZNF341Q9BYN7 854 aa28.71■■■□□ 2.19
APOE-202ENST00000425718 EPB41L4AQ9HCS5 686 aaPredicted RBP28.71■■■□□ 2.19
APOE-202ENST00000425718 SWAP70Q9UH65 585 aa28.71■■■□□ 2.19
APOE-202ENST00000425718 SERPINB13Q9UIV8 391 aa28.71■■■□□ 2.19
APOE-202ENST00000425718 U3KPZ7 1027 aaPredicted RBP28.71■■■□□ 2.19
APOE-202ENST00000425718 CELF2O95319 508 aaKnown RBP28.7■■■□□ 2.18
APOE-202ENST00000425718 IREB2P48200 963 aaKnown RBP28.7■■■□□ 2.18
APOE-202ENST00000425718 VPS53Q5VIR6 699 aa28.7■■■□□ 2.18
APOE-202ENST00000425718 CTR9Q6PD62 1173 aa28.7■■■□□ 2.18
APOE-202ENST00000425718 SH3BP5LQ7L8J4 393 aa28.7■■■□□ 2.18
APOE-202ENST00000425718 METTL16Q86W50 562 aaKnown RBP28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms