RNA–Protein interactions for RNA: ENST00000424536.2

GRAMD1A-203, Transcript of GRAM domain containing 1A, humanhuman

TSL 2 BASIC

Gene GRAMD1A, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-203ENST00000424536 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.72■□□□□ 0.27
GRAMD1A-203ENST00000424536 OTUD5Q96G74 571 aa16.72■□□□□ 0.27
GRAMD1A-203ENST00000424536 ZNF112Q9UJU3 913 aa16.72■□□□□ 0.27
GRAMD1A-203ENST00000424536 LAMB1P07942 1786 aa16.72■□□□□ 0.27
GRAMD1A-203ENST00000424536 MAST2Q6P0Q8 1798 aa16.72■□□□□ 0.27
GRAMD1A-203ENST00000424536 OTOFQ9HC10 1997 aa16.71■□□□□ 0.27
GRAMD1A-203ENST00000424536 IDH1O75874 414 aaKnown RBP16.71■□□□□ 0.27
GRAMD1A-203ENST00000424536 TBC1D8O95759 1140 aa16.71■□□□□ 0.27
GRAMD1A-203ENST00000424536 CETPP11597 493 aa16.71■□□□□ 0.27
GRAMD1A-203ENST00000424536 PPP4CP60510 307 aa16.71■□□□□ 0.27
GRAMD1A-203ENST00000424536 PPIL2Q13356 520 aa16.71■□□□□ 0.27
GRAMD1A-203ENST00000424536 SNAPC2Q13487 334 aa16.71■□□□□ 0.27
GRAMD1A-203ENST00000424536 C20orf194Q5TEA3 1177 aa16.71■□□□□ 0.27
GRAMD1A-203ENST00000424536 SIRT2Q8IXJ6 389 aa16.71■□□□□ 0.27
GRAMD1A-203ENST00000424536 TEX11Q8IYF3 940 aa16.71■□□□□ 0.27
GRAMD1A-203ENST00000424536 LRRCC1Q9C099 1032 aa16.71■□□□□ 0.27
GRAMD1A-203ENST00000424536 DHX36Q9H2U1 1008 aaKnown RBP16.71■□□□□ 0.27
GRAMD1A-203ENST00000424536 TLR7Q9NYK1 1049 aaKnown RBP16.71■□□□□ 0.27
GRAMD1A-203ENST00000424536 CASP8AP2Q9UKL3 1982 aa16.7■□□□□ 0.26
GRAMD1A-203ENST00000424536 CCL15-CCL14A0A0B4J2E2 113 aa16.7■□□□□ 0.26
GRAMD1A-203ENST00000424536 GPR25O00155 361 aa16.7■□□□□ 0.26
GRAMD1A-203ENST00000424536 FKTNO75072 461 aa16.7■□□□□ 0.26
GRAMD1A-203ENST00000424536 RHBDL3P58872 404 aa16.7■□□□□ 0.26
GRAMD1A-203ENST00000424536 PKN2Q16513 984 aaKnown RBP16.7■□□□□ 0.26
GRAMD1A-203ENST00000424536 CCL15Q16663 113 aa16.7■□□□□ 0.26
GRAMD1A-203ENST00000424536 NOL9Q5SY16 702 aaKnown RBP16.7■□□□□ 0.26
GRAMD1A-203ENST00000424536 CTU1Q7Z7A3 348 aaKnown RBP16.7■□□□□ 0.26
GRAMD1A-203ENST00000424536 ZKSCAN4Q969J2 545 aaPredicted RBP16.7■□□□□ 0.26
GRAMD1A-203ENST00000424536 ZCCHC17Q9NP64 241 aaKnown RBP16.7■□□□□ 0.26
GRAMD1A-203ENST00000424536 PICK1Q9NRD5 415 aa16.7■□□□□ 0.26
GRAMD1A-203ENST00000424536 AATFQ9NY61 560 aaKnown RBP eCLIP16.7■□□□□ 0.26
GRAMD1A-203ENST00000424536 SNCAIPQ9Y6H5 919 aa16.7■□□□□ 0.26
GRAMD1A-203ENST00000424536 COL2A1P02458 1487 aaPredicted RBP16.69■□□□□ 0.26
GRAMD1A-203ENST00000424536 RFX7Q2KHR2 1363 aa16.69■□□□□ 0.26
GRAMD1A-203ENST00000424536 ATRNL1Q5VV63 1379 aa16.69■□□□□ 0.26
GRAMD1A-203ENST00000424536 DOCK2Q92608 1830 aa16.69■□□□□ 0.26
GRAMD1A-203ENST00000424536 TBC1D12O60347 775 aa16.69■□□□□ 0.26
GRAMD1A-203ENST00000424536 CAPN15O75808 1086 aa16.69■□□□□ 0.26
GRAMD1A-203ENST00000424536 CYP7A1P22680 504 aa16.69■□□□□ 0.26
GRAMD1A-203ENST00000424536 GJA5P36382 358 aa16.69■□□□□ 0.26
GRAMD1A-203ENST00000424536 RRP1P56182 461 aaKnown RBP16.69■□□□□ 0.26
GRAMD1A-203ENST00000424536 ARHGEF6Q15052 776 aa16.69■□□□□ 0.26
GRAMD1A-203ENST00000424536 ABHD8Q96I13 439 aa16.69■□□□□ 0.26
GRAMD1A-203ENST00000424536 CTNND1O60716 968 aaKnown RBP16.68■□□□□ 0.26
GRAMD1A-203ENST00000424536 INPP5BP32019 993 aa16.68■□□□□ 0.26
GRAMD1A-203ENST00000424536 MAP3K10Q02779 954 aa16.68■□□□□ 0.26
GRAMD1A-203ENST00000424536 ZFPM1Q8IX07 1006 aa16.68■□□□□ 0.26
GRAMD1A-203ENST00000424536 SCYL3Q8IZE3 742 aa16.68■□□□□ 0.26
GRAMD1A-203ENST00000424536 ZNF384Q8TF68 577 aa16.68■□□□□ 0.26
GRAMD1A-203ENST00000424536 ZNF296Q8WUU4 475 aaPredicted RBP16.68■□□□□ 0.26
GRAMD1A-203ENST00000424536 GPATCH3Q96I76 525 aa16.68■□□□□ 0.26
GRAMD1A-203ENST00000424536 MS4A4AQ96JQ5 239 aa16.68■□□□□ 0.26
GRAMD1A-203ENST00000424536 TRIM34Q9BYJ4 488 aa16.68■□□□□ 0.26
GRAMD1A-203ENST00000424536 MCOLN1Q9GZU1 580 aa16.68■□□□□ 0.26
GRAMD1A-203ENST00000424536 OSBPL5Q9H0X9 879 aaPredicted RBP16.68■□□□□ 0.26
GRAMD1A-203ENST00000424536 BCL11AQ9H165 835 aa16.68■□□□□ 0.26
GRAMD1A-203ENST00000424536 ZFYVE28Q9HCC9 887 aa16.68■□□□□ 0.26
GRAMD1A-203ENST00000424536 DDTLA6NHG4 134 aaPredicted RBP16.67■□□□□ 0.26
GRAMD1A-203ENST00000424536 IGF2BP3O00425 579 aaKnown RBP eCLIP16.67■□□□□ 0.26
GRAMD1A-203ENST00000424536 MAGEB6Q8N7X4 407 aa16.67■□□□□ 0.26
GRAMD1A-203ENST00000424536 SH3RF3Q8TEJ3 882 aaPredicted RBP16.67■□□□□ 0.26
GRAMD1A-203ENST00000424536 TBC1D2Q9BYX2 928 aa16.67■□□□□ 0.26
GRAMD1A-203ENST00000424536 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.67■□□□□ 0.26
GRAMD1A-203ENST00000424536 DDX4Q9NQI0 724 aaKnown RBP16.67■□□□□ 0.26
GRAMD1A-203ENST00000424536 PIH1D3Q9NQM4 214 aaKnown RBP16.67■□□□□ 0.26
GRAMD1A-203ENST00000424536 PI4KBQ9UBF8 816 aa16.67■□□□□ 0.26
GRAMD1A-203ENST00000424536 ZBTB47Q9UFB7 747 aaPredicted RBP16.67■□□□□ 0.26
GRAMD1A-203ENST00000424536 HERC5Q9UII4 1024 aaKnown RBP16.67■□□□□ 0.26
GRAMD1A-203ENST00000424536 IRF6O14896 467 aa16.66■□□□□ 0.26
GRAMD1A-203ENST00000424536 HLA-DOAP06340 250 aa16.66■□□□□ 0.26
GRAMD1A-203ENST00000424536 AAMPQ13685 434 aa16.66■□□□□ 0.26
GRAMD1A-203ENST00000424536 TAF1CQ15572 869 aaPredicted RBP16.66■□□□□ 0.26
GRAMD1A-203ENST00000424536 TGFBRAP1Q8WUH2 860 aa16.66■□□□□ 0.26
GRAMD1A-203ENST00000424536 CNKSR2Q8WXI2 1034 aa16.66■□□□□ 0.26
GRAMD1A-203ENST00000424536 ERO1AQ96HE7 468 aa16.66■□□□□ 0.26
GRAMD1A-203ENST00000424536 DNAJC2Q99543 621 aaKnown RBP16.66■□□□□ 0.26
GRAMD1A-203ENST00000424536 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.66■□□□□ 0.261e-6■■□□□ 11.9
GRAMD1A-203ENST00000424536 CXCL11O14625 94 aa16.65■□□□□ 0.26
GRAMD1A-203ENST00000424536 ATP5JP18859 108 aa16.65■□□□□ 0.26
GRAMD1A-203ENST00000424536 USP5P45974 858 aa16.65■□□□□ 0.26
GRAMD1A-203ENST00000424536 SH3BP5LQ7L8J4 393 aa16.65■□□□□ 0.26
GRAMD1A-203ENST00000424536 FOXP4Q8IVH2 680 aaPredicted RBP16.65■□□□□ 0.26
GRAMD1A-203ENST00000424536 CRACR2BQ8N4Y2 399 aaPredicted RBP16.65■□□□□ 0.26
GRAMD1A-203ENST00000424536 BRI3BPQ8WY22 251 aa16.65■□□□□ 0.26
GRAMD1A-203ENST00000424536 DCTPP1Q9H773 170 aa16.65■□□□□ 0.26
GRAMD1A-203ENST00000424536 KCNH4Q9UQ05 1017 aa16.65■□□□□ 0.26
GRAMD1A-203ENST00000424536 PHF20L1A8MW92 1017 aa16.64■□□□□ 0.25
GRAMD1A-203ENST00000424536 CRHR2Q13324 411 aa16.64■□□□□ 0.25
GRAMD1A-203ENST00000424536 ZSCAN25Q6NSZ9 544 aa16.64■□□□□ 0.25
GRAMD1A-203ENST00000424536 FASTKD5Q7L8L6 764 aaKnown RBP16.64■□□□□ 0.25
GRAMD1A-203ENST00000424536 PTPN18Q99952 460 aa16.64■□□□□ 0.25
GRAMD1A-203ENST00000424536 CCDC85CA6NKD9 419 aa16.63■□□□□ 0.25
GRAMD1A-203ENST00000424536 GOLIM4O00461 696 aa16.63■□□□□ 0.25
GRAMD1A-203ENST00000424536 SP3Q02447 781 aa16.63■□□□□ 0.25
GRAMD1A-203ENST00000424536 KIF22Q14807 665 aa16.63■□□□□ 0.25
GRAMD1A-203ENST00000424536 SLC9C2Q5TAH2 1124 aa16.63■□□□□ 0.25
GRAMD1A-203ENST00000424536 ANKRD23Q86SG2 305 aa16.63■□□□□ 0.25
GRAMD1A-203ENST00000424536 ANTXR1Q9H6X2 564 aa16.63■□□□□ 0.25
GRAMD1A-203ENST00000424536 GINM1Q9NU53 330 aa16.63■□□□□ 0.25
GRAMD1A-203ENST00000424536 PAG1Q9NWQ8 432 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms