RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 ZNF579Q8NAF0 562 aaKnown RBP11.64□□□□□ -0.55
NUP50-205ENST00000419387 CD99L2Q8TCZ2 262 aa11.64□□□□□ -0.55
NUP50-205ENST00000419387 IDI2Q9BXS1 227 aa11.64□□□□□ -0.55
NUP50-205ENST00000419387 HMG20BQ9P0W2 317 aa11.64□□□□□ -0.55
NUP50-205ENST00000419387 ENTPD3O75355 529 aa11.63□□□□□ -0.55
NUP50-205ENST00000419387 ARID4AP29374 1257 aaPredicted RBP11.63□□□□□ -0.55
NUP50-205ENST00000419387 MECOMQ03112 1051 aa11.63□□□□□ -0.55
NUP50-205ENST00000419387 ZFPM1Q8IX07 1006 aa11.63□□□□□ -0.55
NUP50-205ENST00000419387 FTSJ3Q8IY81 847 aaKnown RBP11.63□□□□□ -0.55
NUP50-205ENST00000419387 SPATA5Q8NB90 893 aa11.63□□□□□ -0.55
NUP50-205ENST00000419387 SSH3Q8TE77 659 aa11.63□□□□□ -0.55
NUP50-205ENST00000419387 BTBD19C9JJ37 291 aa11.62□□□□□ -0.55
NUP50-205ENST00000419387 ZBTB7BO15156 539 aaPredicted RBP11.62□□□□□ -0.55
NUP50-205ENST00000419387 WDHD1O75717 1129 aaPredicted RBP11.62□□□□□ -0.55
NUP50-205ENST00000419387 BTDP43251 543 aa11.62□□□□□ -0.55
NUP50-205ENST00000419387 RGS3P49796 1198 aa11.62□□□□□ -0.55
NUP50-205ENST00000419387 NOL9Q5SY16 702 aaKnown RBP11.62□□□□□ -0.55
NUP50-205ENST00000419387 ITPRIPQ8IWB1 547 aa11.62□□□□□ -0.55
NUP50-205ENST00000419387 EFCC1Q9HA90 598 aa11.62□□□□□ -0.55
NUP50-205ENST00000419387 ZCCHC17Q9NP64 241 aaKnown RBP11.62□□□□□ -0.55
NUP50-205ENST00000419387 GPR108Q9NPR9 543 aa11.62□□□□□ -0.55
NUP50-205ENST00000419387 PTPN22Q9Y2R2 807 aa11.62□□□□□ -0.55
NUP50-205ENST00000419387 MROH7-TTC4A0A0A0MT08 1334 aa11.61□□□□□ -0.55
NUP50-205ENST00000419387 ZBED9Q6R2W3 1325 aa11.61□□□□□ -0.55
NUP50-205ENST00000419387 GPR75-ASB3A0A0A6YYF3 556 aa11.61□□□□□ -0.55
NUP50-205ENST00000419387 SURF6O75683 361 aaKnown RBP11.61□□□□□ -0.55
NUP50-205ENST00000419387 LDHCP07864 332 aa11.61□□□□□ -0.55
NUP50-205ENST00000419387 UQCRFS1P1P0C7P4 283 aa11.61□□□□□ -0.55
NUP50-205ENST00000419387 RLBP1P12271 317 aa11.61□□□□□ -0.55
NUP50-205ENST00000419387 MCAMP43121 646 aa11.61□□□□□ -0.55
NUP50-205ENST00000419387 GSTO1P78417 241 aa11.61□□□□□ -0.55
NUP50-205ENST00000419387 MAP3K10Q02779 954 aa11.61□□□□□ -0.55
NUP50-205ENST00000419387 OS9Q13438 667 aaPredicted RBP11.61□□□□□ -0.55
NUP50-205ENST00000419387 ARHGEF6Q15052 776 aa11.61□□□□□ -0.55
NUP50-205ENST00000419387 PI16Q6UXB8 463 aa11.61□□□□□ -0.55
NUP50-205ENST00000419387 TBC1D9Q6ZT07 1266 aa11.61□□□□□ -0.55
NUP50-205ENST00000419387 SH3BP5LQ7L8J4 393 aa11.61□□□□□ -0.55
NUP50-205ENST00000419387 ZNF384Q8TF68 577 aa11.61□□□□□ -0.55
NUP50-205ENST00000419387 NSUN4Q96CB9 384 aaKnown RBP11.61□□□□□ -0.55
NUP50-205ENST00000419387 C1orf115Q9H7X2 142 aa11.61□□□□□ -0.55
NUP50-205ENST00000419387 KCNH4Q9UQ05 1017 aa11.61□□□□□ -0.55
NUP50-205ENST00000419387 AK9Q5TCS8 1911 aa11.6□□□□□ -0.55
NUP50-205ENST00000419387 MYH2Q9UKX2 1941 aa11.6□□□□□ -0.55
NUP50-205ENST00000419387 DDTLA6NHG4 134 aaPredicted RBP11.6□□□□□ -0.55
NUP50-205ENST00000419387 PHF20L1A8MW92 1017 aa11.6□□□□□ -0.55
NUP50-205ENST00000419387 TLR2O60603 784 aa11.6□□□□□ -0.55
NUP50-205ENST00000419387 MAP4K4O95819 1239 aaPredicted RBP11.6□□□□□ -0.55
NUP50-205ENST00000419387 RHBDL3P58872 404 aa11.6□□□□□ -0.55
NUP50-205ENST00000419387 CAP1Q01518 475 aa11.6□□□□□ -0.55
NUP50-205ENST00000419387 PICALMQ13492 652 aa11.6□□□□□ -0.55
NUP50-205ENST00000419387 TNNI3KQ59H18 835 aa11.6□□□□□ -0.55
NUP50-205ENST00000419387 CCDC158Q5M9N0 1113 aa11.6□□□□□ -0.55
NUP50-205ENST00000419387 ZSCAN29Q8IWY8 852 aaPredicted RBP11.6□□□□□ -0.55
NUP50-205ENST00000419387 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.6□□□□□ -0.55
NUP50-205ENST00000419387 DDX4Q9NQI0 724 aaKnown RBP11.6□□□□□ -0.55
NUP50-205ENST00000419387 RAI14Q9P0K7 980 aa11.6□□□□□ -0.55
NUP50-205ENST00000419387 LRP2BPQ9P2M1 347 aa11.6□□□□□ -0.55
NUP50-205ENST00000419387 NOP58Q9Y2X3 529 aaKnown RBP11.6□□□□□ -0.55
NUP50-205ENST00000419387 FPGT-TNNI3KV9GXZ4 949 aa11.6□□□□□ -0.55
NUP50-205ENST00000419387 RFX7Q2KHR2 1363 aa11.59□□□□□ -0.55
NUP50-205ENST00000419387 ATRNL1Q5VV63 1379 aa11.59□□□□□ -0.55
NUP50-205ENST00000419387 CXCL11O14625 94 aa11.59□□□□□ -0.55
NUP50-205ENST00000419387 TTC39AQ5SRH9 613 aa11.59□□□□□ -0.55
NUP50-205ENST00000419387 ANKRD23Q86SG2 305 aa11.59□□□□□ -0.55
NUP50-205ENST00000419387 DBNDD2Q9BQY9 259 aa11.59□□□□□ -0.55
NUP50-205ENST00000419387 PDHXO00330 501 aa11.58□□□□□ -0.56
NUP50-205ENST00000419387 TBC1D12O60347 775 aa11.58□□□□□ -0.56
NUP50-205ENST00000419387 CTNND1O60716 968 aaKnown RBP11.58□□□□□ -0.56
NUP50-205ENST00000419387 KIF22Q14807 665 aa11.58□□□□□ -0.56
NUP50-205ENST00000419387 SCYL3Q8IZE3 742 aa11.58□□□□□ -0.56
NUP50-205ENST00000419387 ZNF512BQ96KM6 892 aaPredicted RBP11.58□□□□□ -0.56
NUP50-205ENST00000419387 PICK1Q9NRD5 415 aa11.58□□□□□ -0.56
NUP50-205ENST00000419387 SNRKQ9NRH2 765 aa11.58□□□□□ -0.56
NUP50-205ENST00000419387 ZHX2Q9Y6X8 837 aa11.58□□□□□ -0.56
NUP50-205ENST00000419387 SLURP2P0DP57 97 aa11.57□□□□□ -0.56
NUP50-205ENST00000419387 PTPRAP18433 802 aa11.57□□□□□ -0.56
NUP50-205ENST00000419387 LACTBP83111 547 aaPredicted RBP11.57□□□□□ -0.56
NUP50-205ENST00000419387 MOGSQ13724 837 aa11.57□□□□□ -0.56
NUP50-205ENST00000419387 CEP85Q6P2H3 762 aa11.57□□□□□ -0.56
NUP50-205ENST00000419387 C17orf99Q6UX52 265 aa11.57□□□□□ -0.56
NUP50-205ENST00000419387 PANK1Q8TE04 598 aa11.57□□□□□ -0.56
NUP50-205ENST00000419387 AFG3L2Q9Y4W6 797 aa11.57□□□□□ -0.56
NUP50-205ENST00000419387 IGSF3O75054 1194 aa11.56□□□□□ -0.56
NUP50-205ENST00000419387 BAG3O95817 575 aa11.56□□□□□ -0.56
NUP50-205ENST00000419387 CYP2E1P05181 493 aaPredicted RBP11.56□□□□□ -0.56
NUP50-205ENST00000419387 MS4A1P11836 297 aa11.56□□□□□ -0.56
NUP50-205ENST00000419387 NAA16Q6N069 864 aaPredicted RBP11.56□□□□□ -0.56
NUP50-205ENST00000419387 GPAT2Q6NUI2 795 aa11.56□□□□□ -0.56
NUP50-205ENST00000419387 FASTKD5Q7L8L6 764 aaKnown RBP11.56□□□□□ -0.56
NUP50-205ENST00000419387 TEX11Q8IYF3 940 aa11.56□□□□□ -0.56
NUP50-205ENST00000419387 ARMC5Q96C12 935 aa11.56□□□□□ -0.56
NUP50-205ENST00000419387 NOL10Q9BSC4 688 aaKnown RBP11.56□□□□□ -0.56
NUP50-205ENST00000419387 CCDC8Q9H0W5 538 aaPredicted RBP11.56□□□□□ -0.56
NUP50-205ENST00000419387 OSBPL5Q9H0X9 879 aaPredicted RBP11.56□□□□□ -0.56
NUP50-205ENST00000419387 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.56□□□□□ -0.56
NUP50-205ENST00000419387 CPA4Q9UI42 421 aa11.56□□□□□ -0.56
NUP50-205ENST00000419387 A0A0G2JLL6 359 aaPredicted RBP11.55□□□□□ -0.56
NUP50-205ENST00000419387 GNRH1P01148 92 aa11.55□□□□□ -0.56
NUP50-205ENST00000419387 ZAP70P43403 619 aa11.55□□□□□ -0.56
NUP50-205ENST00000419387 PPP4CP60510 307 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms