RNA–Protein interactions for RNA: ENST00000416215.6

PTPN6-203, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 2

Gene PTPN6, Length 2,412 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-203ENST00000416215 USP28Q96RU2 1077 aa15.75■□□□□ 0.11
PTPN6-203ENST00000416215 GOLGA8AA7E2F4 631 aa15.75■□□□□ 0.11
PTPN6-203ENST00000416215 USP17L12C9JPN9 530 aa15.75■□□□□ 0.11
PTPN6-203ENST00000416215 USP17L21D6R901 530 aa15.75■□□□□ 0.11
PTPN6-203ENST00000416215 UFL1O94874 794 aa15.75■□□□□ 0.11
PTPN6-203ENST00000416215 WTAPQ15007 396 aa15.75■□□□□ 0.11
PTPN6-203ENST00000416215 NTRK3Q16288 839 aa15.75■□□□□ 0.11
PTPN6-203ENST00000416215 ZNF772Q68DY9 489 aaPredicted RBP15.75■□□□□ 0.11
PTPN6-203ENST00000416215 PRDM1O75626 825 aa15.74■□□□□ 0.11
PTPN6-203ENST00000416215 COL23A1Q86Y22 540 aaPredicted RBP15.74■□□□□ 0.11
PTPN6-203ENST00000416215 DZIP1Q86YF9 867 aaKnown RBP15.74■□□□□ 0.11
PTPN6-203ENST00000416215 MYH2Q9UKX2 1941 aa15.74■□□□□ 0.11
PTPN6-203ENST00000416215 UBE2Q2LH0YL09 131 aa15.74■□□□□ 0.11
PTPN6-203ENST00000416215 POLR3DP05423 398 aaPredicted RBP15.74■□□□□ 0.11
PTPN6-203ENST00000416215 PLSCR1O15162 318 aa15.73■□□□□ 0.11
PTPN6-203ENST00000416215 RANBP6O60518 1105 aaKnown RBP15.73■□□□□ 0.11
PTPN6-203ENST00000416215 SART3Q15020 963 aaKnown RBP15.73■□□□□ 0.11
PTPN6-203ENST00000416215 ZNF804AQ7Z570 1209 aa15.73■□□□□ 0.11
PTPN6-203ENST00000416215 DCP1AQ9NPI6 582 aaPredicted RBP15.73■□□□□ 0.11
PTPN6-203ENST00000416215 MYH15Q9Y2K3 1946 aa15.73■□□□□ 0.11
PTPN6-203ENST00000416215 CCDC88AQ3V6T2 1871 aa15.73■□□□□ 0.11
PTPN6-203ENST00000416215 ERICH2A1L162 156 aa15.73■□□□□ 0.11
PTPN6-203ENST00000416215 BBOX1O75936 387 aa15.73■□□□□ 0.11
PTPN6-203ENST00000416215 LETM1O95202 739 aaPredicted RBP15.73■□□□□ 0.11
PTPN6-203ENST00000416215 LDHBP07195 334 aaKnown RBP15.73■□□□□ 0.11
PTPN6-203ENST00000416215 HOXA10P31260 410 aaPredicted RBP15.73■□□□□ 0.11
PTPN6-203ENST00000416215 CAMK4Q16566 473 aa15.73■□□□□ 0.11
PTPN6-203ENST00000416215 SPTY2D1Q68D10 685 aaPredicted RBP15.73■□□□□ 0.11
PTPN6-203ENST00000416215 CPLX2Q6PUV4 134 aaKnown RBP15.73■□□□□ 0.11
PTPN6-203ENST00000416215 SYNE3Q6ZMZ3 975 aa15.73■□□□□ 0.11
PTPN6-203ENST00000416215 WDR66Q8TBY9 1149 aa15.73■□□□□ 0.11
PTPN6-203ENST00000416215 ESR2Q92731 530 aa15.73■□□□□ 0.11
PTPN6-203ENST00000416215 AKT1S1Q96B36 256 aa15.73■□□□□ 0.11
PTPN6-203ENST00000416215 ALG1Q9BT22 464 aa15.73■□□□□ 0.11
PTPN6-203ENST00000416215 CRNKL1Q9BZJ0 848 aaKnown RBP15.73■□□□□ 0.11
PTPN6-203ENST00000416215 DACT1Q9NYF0 836 aa15.73■□□□□ 0.11
PTPN6-203ENST00000416215 RCOR1Q9UKL0 485 aa15.73■□□□□ 0.11
PTPN6-203ENST00000416215 CDKL5O76039 1030 aa15.72■□□□□ 0.11
PTPN6-203ENST00000416215 CYP2D6P10635 497 aa15.72■□□□□ 0.11
PTPN6-203ENST00000416215 IARSP41252 1262 aaKnown RBP15.72■□□□□ 0.11
PTPN6-203ENST00000416215 DIXDC1Q155Q3 683 aa15.72■□□□□ 0.11
PTPN6-203ENST00000416215 UBAC1Q9BSL1 405 aa15.72■□□□□ 0.11
PTPN6-203ENST00000416215 CD209Q9NNX6 404 aa15.72■□□□□ 0.11
PTPN6-203ENST00000416215 POLLQ9UGP5 575 aa15.72■□□□□ 0.11
PTPN6-203ENST00000416215 GGA1Q9UJY5 639 aa15.72■□□□□ 0.11
PTPN6-203ENST00000416215 KIF28PB7ZC32 967 aa15.72■□□□□ 0.11
PTPN6-203ENST00000416215 ATP2B4P23634 1241 aa15.72■□□□□ 0.11
PTPN6-203ENST00000416215 SLC4A8Q2Y0W8 1093 aa15.72■□□□□ 0.11
PTPN6-203ENST00000416215 C15orf52Q6ZUT6 534 aaKnown RBP15.72■□□□□ 0.11
PTPN6-203ENST00000416215 CMTR1Q8N1G2 835 aaKnown RBP15.72■□□□□ 0.11
PTPN6-203ENST00000416215 CCDC82Q8N4S0 544 aa15.72■□□□□ 0.11
PTPN6-203ENST00000416215 BICD2Q8TD16 824 aa15.72■□□□□ 0.11
PTPN6-203ENST00000416215 ANP32BQ92688 251 aaKnown RBP15.72■□□□□ 0.11
PTPN6-203ENST00000416215 ZNF396Q96N95 335 aaPredicted RBP15.72■□□□□ 0.11
PTPN6-203ENST00000416215 TNKSO95271 1327 aa15.71■□□□□ 0.11
PTPN6-203ENST00000416215 KLRG2A4D1S0 409 aaPredicted RBP15.71■□□□□ 0.11
PTPN6-203ENST00000416215 NR1I2O75469 434 aa15.71■□□□□ 0.11
PTPN6-203ENST00000416215 SEC23AQ15436 765 aa15.71■□□□□ 0.11
PTPN6-203ENST00000416215 CRAMP1Q96RY5 1269 aa15.71■□□□□ 0.11
PTPN6-203ENST00000416215 ZBTB22O15209 634 aa15.7■□□□□ 0.1
PTPN6-203ENST00000416215 TMTC2Q8N394 836 aa15.7■□□□□ 0.1
PTPN6-203ENST00000416215 TBC1D16Q8TBP0 767 aa15.7■□□□□ 0.1
PTPN6-203ENST00000416215 NUP133Q8WUM0 1156 aa15.7■□□□□ 0.1
PTPN6-203ENST00000416215 PPP1R9BQ96SB3 815 aa15.7■□□□□ 0.1
PTPN6-203ENST00000416215 SLC26A6Q9BXS9 759 aa15.7■□□□□ 0.1
PTPN6-203ENST00000416215 ATP8A2Q9NTI2 1148 aa15.7■□□□□ 0.1
PTPN6-203ENST00000416215 KIF23Q02241 960 aaPredicted RBP15.7■□□□□ 0.1
PTPN6-203ENST00000416215 CCDC173Q0VFZ6 552 aa15.7■□□□□ 0.1
PTPN6-203ENST00000416215 ZNF654Q8IZM8 581 aa15.7■□□□□ 0.1
PTPN6-203ENST00000416215 NLGN1Q8N2Q7 840 aa15.7■□□□□ 0.1
PTPN6-203ENST00000416215 ENAHQ8N8S7 591 aaPredicted RBP15.7■□□□□ 0.1
PTPN6-203ENST00000416215 MTA3Q9BTC8 594 aa15.7■□□□□ 0.1
PTPN6-203ENST00000416215 FUCA2Q9BTY2 467 aa15.7■□□□□ 0.1
PTPN6-203ENST00000416215 C6orf229H3BNL8 230 aa15.69■□□□□ 0.1
PTPN6-203ENST00000416215 FGRP09769 529 aa15.69■□□□□ 0.1
PTPN6-203ENST00000416215 GUCY1A2P33402 732 aa15.69■□□□□ 0.1
PTPN6-203ENST00000416215 RTN1Q16799 776 aa15.69■□□□□ 0.1
PTPN6-203ENST00000416215 KRT40Q6A162 431 aa15.69■□□□□ 0.1
PTPN6-203ENST00000416215 ATL3Q6DD88 541 aa15.69■□□□□ 0.1
PTPN6-203ENST00000416215 ZSCAN10Q96SZ4 725 aaPredicted RBP15.69■□□□□ 0.1
PTPN6-203ENST00000416215 NUP62CLQ9H1M0 184 aa15.69■□□□□ 0.1
PTPN6-203ENST00000416215 CLIC4Q9Y696 253 aa15.69■□□□□ 0.1
PTPN6-203ENST00000416215 USP17L8P0C7I0 530 aa15.69■□□□□ 0.1
PTPN6-203ENST00000416215 SSRP1Q08945 709 aaKnown RBP15.69■□□□□ 0.1
PTPN6-203ENST00000416215 FANCBQ8NB91 859 aa15.69■□□□□ 0.1
PTPN6-203ENST00000416215 SH3RF3Q8TEJ3 882 aaPredicted RBP15.69■□□□□ 0.1
PTPN6-203ENST00000416215 MCM9Q9NXL9 1143 aa15.69■□□□□ 0.1
PTPN6-203ENST00000416215 PODXL2Q9NZ53 605 aa15.69■□□□□ 0.1
PTPN6-203ENST00000416215 IFNAR1P17181 557 aa15.68■□□□□ 0.1
PTPN6-203ENST00000416215 RXRBP28702 533 aa15.68■□□□□ 0.1
PTPN6-203ENST00000416215 MYSM1Q5VVJ2 828 aa15.68■□□□□ 0.1
PTPN6-203ENST00000416215 OLFM4Q6UX06 510 aa15.68■□□□□ 0.1
PTPN6-203ENST00000416215 DUOX1Q9NRD9 1551 aa15.68■□□□□ 0.1
PTPN6-203ENST00000416215 FMNL1O95466 1100 aaPredicted RBP15.68■□□□□ 0.1
PTPN6-203ENST00000416215 IL1R1P14778 569 aa15.68■□□□□ 0.1
PTPN6-203ENST00000416215 ME1P48163 572 aa15.68■□□□□ 0.1
PTPN6-203ENST00000416215 FAM47AQ5JRC9 791 aa15.68■□□□□ 0.1
PTPN6-203ENST00000416215 MSL1Q68DK7 614 aa15.68■□□□□ 0.1
PTPN6-203ENST00000416215 CKAP2LQ8IYA6 745 aa15.68■□□□□ 0.1
PTPN6-203ENST00000416215 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms