RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 IGF2BP3O00425 579 aaKnown RBP eCLIP13.4□□□□□ -0.26
A1CF-208ENST00000414883 ENTPD3O75355 529 aa13.4□□□□□ -0.26
A1CF-208ENST00000414883 SLURP2P0DP57 97 aa13.4□□□□□ -0.26
A1CF-208ENST00000414883 MAP3K10Q02779 954 aa13.4□□□□□ -0.26
A1CF-208ENST00000414883 HSP90AB4PQ58FF6 505 aa13.4□□□□□ -0.26
A1CF-208ENST00000414883 MIGA2Q7L4E1 593 aa13.4□□□□□ -0.26
A1CF-208ENST00000414883 AACSQ86V21 672 aa13.4□□□□□ -0.26
A1CF-208ENST00000414883 OPTNQ96CV9 577 aa13.4□□□□□ -0.26
A1CF-208ENST00000414883 PTPN18Q99952 460 aa13.4□□□□□ -0.26
A1CF-208ENST00000414883 CFHR5Q9BXR6 569 aa13.4□□□□□ -0.26
A1CF-208ENST00000414883 ELP3Q9H9T3 547 aa13.4□□□□□ -0.26
A1CF-208ENST00000414883 PHIPQ8WWQ0 1821 aa13.4□□□□□ -0.26
A1CF-208ENST00000414883 DDTLA6NHG4 134 aaPredicted RBP13.39□□□□□ -0.27
A1CF-208ENST00000414883 PHF20L1A8MW92 1017 aa13.39□□□□□ -0.27
A1CF-208ENST00000414883 HMMRO75330 724 aa13.39□□□□□ -0.27
A1CF-208ENST00000414883 RRP1P56182 461 aaKnown RBP13.39□□□□□ -0.27
A1CF-208ENST00000414883 SLF2Q8IX21 1173 aa13.39□□□□□ -0.27
A1CF-208ENST00000414883 ZKSCAN4Q969J2 545 aaPredicted RBP13.39□□□□□ -0.27
A1CF-208ENST00000414883 KIF1BPQ96EK5 621 aa13.39□□□□□ -0.27
A1CF-208ENST00000414883 WRNIP1Q96S55 665 aa13.39□□□□□ -0.27
A1CF-208ENST00000414883 CHMP4BQ9H444 224 aaKnown RBP13.39□□□□□ -0.27
A1CF-208ENST00000414883 ANTXR1Q9H6X2 564 aa13.39□□□□□ -0.27
A1CF-208ENST00000414883 TNRC18O15417 2968 aaPredicted RBP13.39□□□□□ -0.27
A1CF-208ENST00000414883 PTPRFP10586 1907 aa13.39□□□□□ -0.27
A1CF-208ENST00000414883 COL2A1P02458 1487 aaPredicted RBP13.38□□□□□ -0.27
A1CF-208ENST00000414883 MANSC4A6NHS7 340 aaPredicted RBP13.38□□□□□ -0.27
A1CF-208ENST00000414883 SPDYE5A6NIY4 337 aa13.38□□□□□ -0.27
A1CF-208ENST00000414883 RAB11FIP3O75154 756 aa13.38□□□□□ -0.27
A1CF-208ENST00000414883 TBC1D8O95759 1140 aa13.38□□□□□ -0.27
A1CF-208ENST00000414883 INPP5BP32019 993 aa13.38□□□□□ -0.27
A1CF-208ENST00000414883 GSTO1P78417 241 aa13.38□□□□□ -0.27
A1CF-208ENST00000414883 SREBF2Q12772 1141 aa13.38□□□□□ -0.27
A1CF-208ENST00000414883 IFNL1Q8IU54 200 aa13.38□□□□□ -0.27
A1CF-208ENST00000414883 YTHDC1Q96MU7 727 aaKnown RBP13.38□□□□□ -0.27
A1CF-208ENST00000414883 RAI14Q9P0K7 980 aa13.38□□□□□ -0.27
A1CF-208ENST00000414883 LRP2BPQ9P2M1 347 aa13.38□□□□□ -0.27
A1CF-208ENST00000414883 PCDHB15Q9Y5E8 787 aa13.38□□□□□ -0.27
A1CF-208ENST00000414883 APBB1O00213 710 aa13.37□□□□□ -0.27
A1CF-208ENST00000414883 MAP4K4O95819 1239 aaPredicted RBP13.37□□□□□ -0.27
A1CF-208ENST00000414883 LDHCP07864 332 aa13.37□□□□□ -0.27
A1CF-208ENST00000414883 INHBEP58166 350 aa13.37□□□□□ -0.27
A1CF-208ENST00000414883 PPP4CP60510 307 aa13.37□□□□□ -0.27
A1CF-208ENST00000414883 NOM1Q5C9Z4 860 aaKnown RBP13.37□□□□□ -0.27
A1CF-208ENST00000414883 DCAF15Q66K64 600 aa13.37□□□□□ -0.27
A1CF-208ENST00000414883 SH3RF3Q8TEJ3 882 aaPredicted RBP13.37□□□□□ -0.27
A1CF-208ENST00000414883 BRI3BPQ8WY22 251 aa13.37□□□□□ -0.27
A1CF-208ENST00000414883 HOOK2Q96ED9 719 aa13.37□□□□□ -0.27
A1CF-208ENST00000414883 ZNF341Q9BYN7 854 aa13.37□□□□□ -0.27
A1CF-208ENST00000414883 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.37□□□□□ -0.27
A1CF-208ENST00000414883 DOCK1Q14185 1865 aa13.37□□□□□ -0.27
A1CF-208ENST00000414883 IGSF3O75054 1194 aa13.36□□□□□ -0.27
A1CF-208ENST00000414883 NOL9Q5SY16 702 aaKnown RBP13.36□□□□□ -0.27
A1CF-208ENST00000414883 NAA16Q6N069 864 aaPredicted RBP13.36□□□□□ -0.27
A1CF-208ENST00000414883 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.36□□□□□ -0.27
A1CF-208ENST00000414883 CSADQ9Y600 493 aa13.36□□□□□ -0.27
A1CF-208ENST00000414883 MYH7P12883 1935 aa13.36□□□□□ -0.27
A1CF-208ENST00000414883 ATAD5Q96QE3 1844 aa13.36□□□□□ -0.27
A1CF-208ENST00000414883 MYH1P12882 1939 aa13.35□□□□□ -0.27
A1CF-208ENST00000414883 PICALMQ13492 652 aa13.35□□□□□ -0.27
A1CF-208ENST00000414883 MOGSQ13724 837 aa13.35□□□□□ -0.27
A1CF-208ENST00000414883 ERO1BQ86YB8 467 aa13.35□□□□□ -0.27
A1CF-208ENST00000414883 CLASRPQ8N2M8 674 aaKnown RBP13.35□□□□□ -0.27
A1CF-208ENST00000414883 ZNF296Q8WUU4 475 aaPredicted RBP13.35□□□□□ -0.27
A1CF-208ENST00000414883 OTUD5Q96G74 571 aa13.35□□□□□ -0.27
A1CF-208ENST00000414883 DCTPP1Q9H773 170 aa13.35□□□□□ -0.27
A1CF-208ENST00000414883 AATFQ9NY61 560 aaKnown RBP eCLIP13.35□□□□□ -0.27
A1CF-208ENST00000414883 DDX60LQ5H9U9 1706 aaKnown RBP13.35□□□□□ -0.27
A1CF-208ENST00000414883 GPR25O00155 361 aa13.34□□□□□ -0.27
A1CF-208ENST00000414883 IRF6O14896 467 aa13.34□□□□□ -0.27
A1CF-208ENST00000414883 SMARCA5O60264 1052 aaPredicted RBP13.34□□□□□ -0.27
A1CF-208ENST00000414883 TBC1D12O60347 775 aa13.34□□□□□ -0.27
A1CF-208ENST00000414883 DYNLL1P63167 89 aaKnown RBP13.34□□□□□ -0.27
A1CF-208ENST00000414883 CAP1Q01518 475 aa13.34□□□□□ -0.27
A1CF-208ENST00000414883 PPIL2Q13356 520 aa13.34□□□□□ -0.27
A1CF-208ENST00000414883 TEX11Q8IYF3 940 aa13.34□□□□□ -0.27
A1CF-208ENST00000414883 EDC3Q96F86 508 aaKnown RBP13.34□□□□□ -0.27
A1CF-208ENST00000414883 MCOLN1Q9GZU1 580 aa13.34□□□□□ -0.27
A1CF-208ENST00000414883 OSBPL5Q9H0X9 879 aaPredicted RBP13.34□□□□□ -0.27
A1CF-208ENST00000414883 TCRBV5S4A2TA0A5A2 114 aa13.33□□□□□ -0.28
A1CF-208ENST00000414883 IDH1O75874 414 aaKnown RBP13.33□□□□□ -0.28
A1CF-208ENST00000414883 ALDH1A1P00352 501 aa13.33□□□□□ -0.28
A1CF-208ENST00000414883 GTF2A2P52657 109 aa13.33□□□□□ -0.28
A1CF-208ENST00000414883 PPATQ06203 517 aa13.33□□□□□ -0.28
A1CF-208ENST00000414883 RRP1BQ14684 758 aaKnown RBP13.33□□□□□ -0.28
A1CF-208ENST00000414883 METTL16Q86W50 562 aaKnown RBP13.33□□□□□ -0.28
A1CF-208ENST00000414883 FAM43AQ8N2R8 423 aa13.33□□□□□ -0.28
A1CF-208ENST00000414883 ABHD8Q96I13 439 aa13.33□□□□□ -0.28
A1CF-208ENST00000414883 CRBNQ96SW2 442 aa13.33□□□□□ -0.28
A1CF-208ENST00000414883 LRRCC1Q9C099 1032 aa13.33□□□□□ -0.28
A1CF-208ENST00000414883 KCNH4Q9UQ05 1017 aa13.33□□□□□ -0.28
A1CF-208ENST00000414883 FLT1P17948 1338 aa13.33□□□□□ -0.28
A1CF-208ENST00000414883 CCL15-CCL14A0A0B4J2E2 113 aa13.32□□□□□ -0.28
A1CF-208ENST00000414883 FAM196BA6NMK8 535 aa13.32□□□□□ -0.28
A1CF-208ENST00000414883 IFIT2P09913 472 aaKnown RBP13.32□□□□□ -0.28
A1CF-208ENST00000414883 ATP5JP18859 108 aa13.32□□□□□ -0.28
A1CF-208ENST00000414883 CYP7A1P22680 504 aa13.32□□□□□ -0.28
A1CF-208ENST00000414883 CRHR2Q13324 411 aa13.32□□□□□ -0.28
A1CF-208ENST00000414883 CCL15Q16663 113 aa13.32□□□□□ -0.28
A1CF-208ENST00000414883 ZSCAN29Q8IWY8 852 aaPredicted RBP13.32□□□□□ -0.28
A1CF-208ENST00000414883 MAGEB6Q8N7X4 407 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms