RNA–Protein interactions for RNA: ENST00000414241.7

RBBP4-204, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-204ENST00000414241 TOMM22Q9NS69 142 aa17.24■□□□□ 0.35
RBBP4-204ENST00000414241 LAMA4Q16363 1823 aa17.24■□□□□ 0.35
RBBP4-204ENST00000414241 C10orf71Q711Q0 1435 aa17.24■□□□□ 0.35
RBBP4-204ENST00000414241 CHRNA5P30532 468 aa17.23■□□□□ 0.35
RBBP4-204ENST00000414241 USP5P45974 858 aa17.23■□□□□ 0.35
RBBP4-204ENST00000414241 RCAN1P53805 252 aa17.23■□□□□ 0.35
RBBP4-204ENST00000414241 CCT2P78371 535 aaKnown RBP17.23■□□□□ 0.35
RBBP4-204ENST00000414241 GSE1Q14687 1217 aa17.23■□□□□ 0.35
RBBP4-204ENST00000414241 CPLX2Q6PUV4 134 aaKnown RBP17.23■□□□□ 0.35
RBBP4-204ENST00000414241 LY9Q9HBG7 655 aa17.23■□□□□ 0.35
RBBP4-204ENST00000414241 PTPDC1A2A3K4 754 aa17.23■□□□□ 0.35
RBBP4-204ENST00000414241 VPS37CA5D8V6 355 aaPredicted RBP17.23■□□□□ 0.35
RBBP4-204ENST00000414241 CPLX1O14810 134 aa17.23■□□□□ 0.35
RBBP4-204ENST00000414241 ORC4O43929 436 aa17.23■□□□□ 0.35
RBBP4-204ENST00000414241 JAK2O60674 1132 aa17.23■□□□□ 0.35
RBBP4-204ENST00000414241 CDKL5O76039 1030 aa17.23■□□□□ 0.35
RBBP4-204ENST00000414241 FKBP1AP62942 108 aaKnown RBP17.23■□□□□ 0.35
RBBP4-204ENST00000414241 DIXDC1Q155Q3 683 aa17.23■□□□□ 0.35
RBBP4-204ENST00000414241 GRIK5Q16478 980 aa17.23■□□□□ 0.35
RBBP4-204ENST00000414241 RRP12Q5JTH9 1297 aaKnown RBP17.23■□□□□ 0.35
RBBP4-204ENST00000414241 NFXL1Q6ZNB6 911 aa17.23■□□□□ 0.35
RBBP4-204ENST00000414241 UBAC1Q9BSL1 405 aa17.23■□□□□ 0.35
RBBP4-204ENST00000414241 MKRN1Q9UHC7 482 aaKnown RBP17.23■□□□□ 0.35
RBBP4-204ENST00000414241 HPS5Q9UPZ3 1129 aa17.23■□□□□ 0.35
RBBP4-204ENST00000414241 GAKO14976 1311 aa17.22■□□□□ 0.35
RBBP4-204ENST00000414241 MYH13Q9UKX3 1938 aa17.22■□□□□ 0.35
RBBP4-204ENST00000414241 CCDC69A6NI79 296 aa17.22■□□□□ 0.35
RBBP4-204ENST00000414241 CTDNEP1O95476 244 aa17.22■□□□□ 0.35
RBBP4-204ENST00000414241 COL11A2P13942 1736 aaPredicted RBP17.22■□□□□ 0.35
RBBP4-204ENST00000414241 PDE4BQ07343 736 aa17.22■□□□□ 0.35
RBBP4-204ENST00000414241 CSPP1Q1MSJ5 1256 aa17.22■□□□□ 0.35
RBBP4-204ENST00000414241 APOA5Q6Q788 366 aa17.22■□□□□ 0.35
RBBP4-204ENST00000414241 OLFM4Q6UX06 510 aa17.22■□□□□ 0.35
RBBP4-204ENST00000414241 INCENPQ9NQS7 918 aa17.22■□□□□ 0.35
RBBP4-204ENST00000414241 LMBRD1Q9NUN5 540 aa17.22■□□□□ 0.35
RBBP4-204ENST00000414241 SLC12A7Q9Y666 1083 aa17.22■□□□□ 0.35
RBBP4-204ENST00000414241 TACC3Q9Y6A5 838 aa17.22■□□□□ 0.35
RBBP4-204ENST00000414241 ZBTB43O43298 467 aa17.21■□□□□ 0.35
RBBP4-204ENST00000414241 BTDP43251 543 aa17.21■□□□□ 0.35
RBBP4-204ENST00000414241 WTAPQ15007 396 aa17.21■□□□□ 0.35
RBBP4-204ENST00000414241 KLHL40Q2TBA0 621 aa17.21■□□□□ 0.35
RBBP4-204ENST00000414241 SH3RF3Q8TEJ3 882 aaPredicted RBP17.21■□□□□ 0.35
RBBP4-204ENST00000414241 NCOA5Q9HCD5 579 aaKnown RBP17.21■□□□□ 0.35
RBBP4-204ENST00000414241 MCM9Q9NXL9 1143 aa17.21■□□□□ 0.35
RBBP4-204ENST00000414241 H3BQV1 296 aa17.2■□□□□ 0.34
RBBP4-204ENST00000414241 PRPF40AO75400 957 aaKnown RBP17.2■□□□□ 0.34
RBBP4-204ENST00000414241 METAP2P50579 478 aaKnown RBP eCLIP17.2■□□□□ 0.34
RBBP4-204ENST00000414241 PPP2R5BQ15173 497 aa17.2■□□□□ 0.34
RBBP4-204ENST00000414241 DOK7Q18PE1 504 aa17.2■□□□□ 0.34
RBBP4-204ENST00000414241 IFFO2Q5TF58 517 aa17.2■□□□□ 0.34
RBBP4-204ENST00000414241 IQCA1Q86XH1 822 aa17.2■□□□□ 0.34
RBBP4-204ENST00000414241 TTLL6Q8N841 843 aa17.2■□□□□ 0.34
RBBP4-204ENST00000414241 MRIQ9BWK5 157 aa17.2■□□□□ 0.34
RBBP4-204ENST00000414241 PDGFDQ9GZP0 370 aaPredicted RBP17.2■□□□□ 0.34
RBBP4-204ENST00000414241 ZSCAN16Q9H4T2 348 aaPredicted RBP17.2■□□□□ 0.34
RBBP4-204ENST00000414241 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.2■□□□□ 0.34
RBBP4-204ENST00000414241 KIAA1551Q9HCM1 1747 aa17.2■□□□□ 0.34
RBBP4-204ENST00000414241 C12orf60Q5U649 245 aa17.2■□□□□ 0.34
RBBP4-204ENST00000414241 TMEM87AQ8NBN3 555 aa17.2■□□□□ 0.34
RBBP4-204ENST00000414241 DDX11Q96FC9 970 aa17.2■□□□□ 0.34
RBBP4-204ENST00000414241 ZNF287Q9HBT7 754 aa17.2■□□□□ 0.34
RBBP4-204ENST00000414241 DDX49Q9Y6V7 483 aaKnown RBP17.2■□□□□ 0.34
RBBP4-204ENST00000414241 CCDC196A0A1B0GTZ2 297 aa17.19■□□□□ 0.34
RBBP4-204ENST00000414241 STRIP1Q5VSL9 837 aa17.19■□□□□ 0.34
RBBP4-204ENST00000414241 RTKN2Q8IZC4 609 aa17.19■□□□□ 0.34
RBBP4-204ENST00000414241 NKX2-3Q8TAU0 364 aa17.19■□□□□ 0.34
RBBP4-204ENST00000414241 NID2Q14112 1375 aa17.18■□□□□ 0.34
RBBP4-204ENST00000414241 CCDC88AQ3V6T2 1871 aa17.18■□□□□ 0.34
RBBP4-204ENST00000414241 CYP2D7A0A087X1C5 515 aa17.18■□□□□ 0.34
RBBP4-204ENST00000414241 MBD3O95983 291 aa17.18■□□□□ 0.34
RBBP4-204ENST00000414241 NCLP19338 710 aaKnown RBP17.18■□□□□ 0.34
RBBP4-204ENST00000414241 KIAA2012Q0VF49 1180 aa17.18■□□□□ 0.34
RBBP4-204ENST00000414241 TEX11Q8IYF3 940 aa17.18■□□□□ 0.34
RBBP4-204ENST00000414241 FBXW7Q969H0 707 aa17.18■□□□□ 0.34
RBBP4-204ENST00000414241 ZSCAN10Q96SZ4 725 aaPredicted RBP17.18■□□□□ 0.34
RBBP4-204ENST00000414241 TGFB2P61812 414 aa17.17■□□□□ 0.34
RBBP4-204ENST00000414241 CCDC178Q5BJE1 867 aa17.17■□□□□ 0.34
RBBP4-204ENST00000414241 HHIPL2Q6UWX4 724 aa17.17■□□□□ 0.34
RBBP4-204ENST00000414241 CDC37L1Q7L3B6 337 aa17.17■□□□□ 0.34
RBBP4-204ENST00000414241 TGFBRAP1Q8WUH2 860 aa17.17■□□□□ 0.34
RBBP4-204ENST00000414241 VPS33BQ9H267 617 aa17.17■□□□□ 0.34
RBBP4-204ENST00000414241 ROBO3Q96MS0 1386 aa17.17■□□□□ 0.34
RBBP4-204ENST00000414241 GOLGA8AA7E2F4 631 aa17.17■□□□□ 0.34
RBBP4-204ENST00000414241 RANBP6O60518 1105 aaKnown RBP17.17■□□□□ 0.34
RBBP4-204ENST00000414241 POLD1P28340 1107 aa17.17■□□□□ 0.34
RBBP4-204ENST00000414241 RHBDL3P58872 404 aa17.17■□□□□ 0.34
RBBP4-204ENST00000414241 HDLBPQ00341 1268 aaKnown RBP17.17■□□□□ 0.34
RBBP4-204ENST00000414241 SEC23AQ15436 765 aa17.17■□□□□ 0.34
RBBP4-204ENST00000414241 CCDC93Q567U6 631 aa17.17■□□□□ 0.34
RBBP4-204ENST00000414241 SOGA3Q5TF21 947 aa17.17■□□□□ 0.34
RBBP4-204ENST00000414241 ORC3Q9UBD5 711 aaPredicted RBP17.17■□□□□ 0.34
RBBP4-204ENST00000414241 TTF2Q9UNY4 1162 aaKnown RBP17.17■□□□□ 0.34
RBBP4-204ENST00000414241 DAGLAQ9Y4D2 1042 aa17.17■□□□□ 0.34
RBBP4-204ENST00000414241 TNKSO95271 1327 aa17.16■□□□□ 0.34
RBBP4-204ENST00000414241 USP17L8P0C7I0 530 aa17.16■□□□□ 0.34
RBBP4-204ENST00000414241 MICU3Q86XE3 530 aa17.16■□□□□ 0.34
RBBP4-204ENST00000414241 STK11IPQ8N1F8 1099 aa17.16■□□□□ 0.34
RBBP4-204ENST00000414241 CERS5Q8N5B7 392 aa17.16■□□□□ 0.34
RBBP4-204ENST00000414241 SNED1Q8TER0 1413 aa17.16■□□□□ 0.34
RBBP4-204ENST00000414241 USP17L3A6NCW0 530 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms