RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 MS4A4AQ96JQ5 239 aa32.22■■■□□ 2.75
VEGFA-207ENST00000413642 MYH2Q9UKX2 1941 aa32.22■■■□□ 2.75
VEGFA-207ENST00000413642 DDTLA6NHG4 134 aaPredicted RBP32.21■■■□□ 2.75
VEGFA-207ENST00000413642 AKAP11Q9UKA4 1901 aa32.21■■■□□ 2.75
VEGFA-207ENST00000413642 SPDYE5A6NIY4 337 aa32.2■■■□□ 2.75
VEGFA-207ENST00000413642 NAA16Q6N069 864 aaPredicted RBP32.2■■■□□ 2.75
VEGFA-207ENST00000413642 ADGRA1Q86SQ6 560 aa32.2■■■□□ 2.75
VEGFA-207ENST00000413642 ZSCAN29Q8IWY8 852 aaPredicted RBP32.2■■■□□ 2.75
VEGFA-207ENST00000413642 ZNF296Q8WUU4 475 aaPredicted RBP32.2■■■□□ 2.75
VEGFA-207ENST00000413642 ZNF112Q9UJU3 913 aa32.2■■■□□ 2.75
VEGFA-207ENST00000413642 TESPA1A2RU30 521 aaPredicted RBP32.19■■■□□ 2.74
VEGFA-207ENST00000413642 GPR25O00155 361 aa32.19■■■□□ 2.74
VEGFA-207ENST00000413642 KIF1BPQ96EK5 621 aa32.19■■■□□ 2.74
VEGFA-207ENST00000413642 ATRNL1Q5VV63 1379 aa32.19■■■□□ 2.74
VEGFA-207ENST00000413642 SH3RF3Q8TEJ3 882 aaPredicted RBP32.18■■■□□ 2.74
VEGFA-207ENST00000413642 BRI3BPQ8WY22 251 aa32.18■■■□□ 2.74
VEGFA-207ENST00000413642 ANTXR1Q9H6X2 564 aa32.18■■■□□ 2.74
VEGFA-207ENST00000413642 ALDH1A1P00352 501 aa32.17■■■□□ 2.74
VEGFA-207ENST00000413642 ERO1BQ86YB8 467 aa32.17■■■□□ 2.74
VEGFA-207ENST00000413642 CFHR5Q9BXR6 569 aa32.17■■■□□ 2.74
VEGFA-207ENST00000413642 AATFQ9NY61 560 aaKnown RBP eCLIP32.17■■■□□ 2.74
VEGFA-207ENST00000413642 CLASRPQ8N2M8 674 aaKnown RBP32.16■■■□□ 2.74
VEGFA-207ENST00000413642 CCL15-CCL14A0A0B4J2E2 113 aa32.15■■■□□ 2.74
VEGFA-207ENST00000413642 RAB11FIP3O75154 756 aa32.15■■■□□ 2.74
VEGFA-207ENST00000413642 CCL15Q16663 113 aa32.15■■■□□ 2.74
VEGFA-207ENST00000413642 TEX11Q8IYF3 940 aa32.15■■■□□ 2.74
VEGFA-207ENST00000413642 IRF6O14896 467 aa32.14■■■□□ 2.74
VEGFA-207ENST00000413642 IDH1O75874 414 aaKnown RBP32.14■■■□□ 2.74
VEGFA-207ENST00000413642 GTF2A2P52657 109 aa32.14■■■□□ 2.74
VEGFA-207ENST00000413642 PHF20L1A8MW92 1017 aa32.13■■■□□ 2.73
VEGFA-207ENST00000413642 IFIT2P09913 472 aaKnown RBP32.12■■■□□ 2.73
VEGFA-207ENST00000413642 NOL10Q9BSC4 688 aaKnown RBP32.12■■■□□ 2.73
VEGFA-207ENST00000413642 FAM196BA6NMK8 535 aa32.11■■■□□ 2.73
VEGFA-207ENST00000413642 NPM3O75607 178 aaKnown RBP32.11■■■□□ 2.73
VEGFA-207ENST00000413642 MAP4K4O95819 1239 aaPredicted RBP32.11■■■□□ 2.73
VEGFA-207ENST00000413642 CYP7A1P22680 504 aa32.11■■■□□ 2.73
VEGFA-207ENST00000413642 RRP1P56182 461 aaKnown RBP32.11■■■□□ 2.73
VEGFA-207ENST00000413642 PPP4CP60510 307 aa32.11■■■□□ 2.73
VEGFA-207ENST00000413642 DYNLL1P63167 89 aaKnown RBP32.11■■■□□ 2.73
VEGFA-207ENST00000413642 MAP3K10Q02779 954 aa32.11■■■□□ 2.73
VEGFA-207ENST00000413642 CRHR2Q13324 411 aa32.11■■■□□ 2.73
VEGFA-207ENST00000413642 PPIL2Q13356 520 aa32.11■■■□□ 2.73
VEGFA-207ENST00000413642 OTUD7BQ6GQQ9 843 aa32.11■■■□□ 2.73
VEGFA-207ENST00000413642 CTU1Q7Z7A3 348 aaKnown RBP32.11■■■□□ 2.73
VEGFA-207ENST00000413642 FAM43AQ8N2R8 423 aa32.11■■■□□ 2.73
VEGFA-207ENST00000413642 OSBPL5Q9H0X9 879 aaPredicted RBP32.11■■■□□ 2.73
VEGFA-207ENST00000413642 FKTNO75072 461 aa32.1■■■□□ 2.73
VEGFA-207ENST00000413642 BAG3O95817 575 aa32.1■■■□□ 2.73
VEGFA-207ENST00000413642 PPATQ06203 517 aa32.1■■■□□ 2.73
VEGFA-207ENST00000413642 NOM1Q5C9Z4 860 aaKnown RBP32.1■■■□□ 2.73
VEGFA-207ENST00000413642 NOL9Q5SY16 702 aaKnown RBP32.1■■■□□ 2.73
VEGFA-207ENST00000413642 SMARCA5O60264 1052 aaPredicted RBP32.09■■■□□ 2.73
VEGFA-207ENST00000413642 MAGEB6Q8N7X4 407 aa32.09■■■□□ 2.73
VEGFA-207ENST00000413642 CCDC85CA6NKD9 419 aa32.08■■■□□ 2.73
VEGFA-207ENST00000413642 SNAPC2Q13487 334 aa32.08■■■□□ 2.73
VEGFA-207ENST00000413642 CETPP11597 493 aa32.07■■■□□ 2.72
VEGFA-207ENST00000413642 MAPKAPK5Q8IW41 473 aa32.07■■■□□ 2.72
VEGFA-207ENST00000413642 MIGA1Q8NAN2 632 aa32.07■■■□□ 2.72
VEGFA-207ENST00000413642 TGFBRAP1Q8WUH2 860 aa32.07■■■□□ 2.72
VEGFA-207ENST00000413642 SCYL3Q8IZE3 742 aa32.06■■■□□ 2.72
VEGFA-207ENST00000413642 EDC3Q96F86 508 aaKnown RBP32.06■■■□□ 2.72
VEGFA-207ENST00000413642 DNAJC2Q99543 621 aaKnown RBP32.06■■■□□ 2.72
VEGFA-207ENST00000413642 FRMD4AQ9P2Q2 1039 aaPredicted RBP32.06■■■□□ 2.72
VEGFA-207ENST00000413642 LAMB1P07942 1786 aa32.05■■■□□ 2.72
VEGFA-207ENST00000413642 AK9Q5TCS8 1911 aa32.05■■■□□ 2.72
VEGFA-207ENST00000413642 BTBD19C9JJ37 291 aa32.05■■■□□ 2.72
VEGFA-207ENST00000413642 PCDHB15Q9Y5E8 787 aa32.05■■■□□ 2.72
VEGFA-207ENST00000413642 MAST2Q6P0Q8 1798 aa32.04■■■□□ 2.72
VEGFA-207ENST00000413642 IGSF3O75054 1194 aa32.04■■■□□ 2.72
VEGFA-207ENST00000413642 PLCG2P16885 1265 aa32.04■■■□□ 2.72
VEGFA-207ENST00000413642 MAP3K12Q12852 859 aa32.04■■■□□ 2.72
VEGFA-207ENST00000413642 TAF1CQ15572 869 aaPredicted RBP32.04■■■□□ 2.72
VEGFA-207ENST00000413642 CCDC84Q86UT8 332 aaPredicted RBP32.04■■■□□ 2.72
VEGFA-207ENST00000413642 LRRCC1Q9C099 1032 aa32.04■■■□□ 2.72
VEGFA-207ENST00000413642 XPO5Q9HAV4 1204 aaKnown RBP eCLIP32.04■■■□□ 2.723e-7■■■■■ 34.2
VEGFA-207ENST00000413642 KCNH4Q9UQ05 1017 aa32.04■■■□□ 2.72
VEGFA-207ENST00000413642 GOLIM4O00461 696 aa32.03■■■□□ 2.72
VEGFA-207ENST00000413642 TBC1D12O60347 775 aa32.03■■■□□ 2.72
VEGFA-207ENST00000413642 PPIL4Q8WUA2 492 aaKnown RBP eCLIP32.03■■■□□ 2.72
VEGFA-207ENST00000413642 ZHX2Q9Y6X8 837 aa32.03■■■□□ 2.72
VEGFA-207ENST00000413642 FLT1P17948 1338 aa32.02■■■□□ 2.72
VEGFA-207ENST00000413642 MYO5AQ9Y4I1 1855 aaKnown RBP32.02■■■□□ 2.72
VEGFA-207ENST00000413642 PTPRAP18433 802 aa32.02■■■□□ 2.72
VEGFA-207ENST00000413642 RRP1BQ14684 758 aaKnown RBP32.02■■■□□ 2.72
VEGFA-207ENST00000413642 BOLA2Q9H3K6 86 aa32.02■■■□□ 2.72
VEGFA-207ENST00000413642 DCTPP1Q9H773 170 aa32.02■■■□□ 2.72
VEGFA-207ENST00000413642 PICK1Q9NRD5 415 aa32.02■■■□□ 2.72
VEGFA-207ENST00000413642 DOCK2Q92608 1830 aa32.02■■■□□ 2.72
VEGFA-207ENST00000413642 MOGSQ13724 837 aa32.01■■■□□ 2.71
VEGFA-207ENST00000413642 CRBNQ96SW2 442 aa32.01■■■□□ 2.71
VEGFA-207ENST00000413642 SAP30BPQ9UHR5 308 aaKnown RBP32.01■■■□□ 2.71
VEGFA-207ENST00000413642 COL2A1P02458 1487 aaPredicted RBP32.01■■■□□ 2.71
VEGFA-207ENST00000413642 CTNND1O60716 968 aaKnown RBP32■■■□□ 2.71
VEGFA-207ENST00000413642 ZFYVE28Q9HCC9 887 aa32■■■□□ 2.71
VEGFA-207ENST00000413642 PALD1Q9ULE6 856 aa32■■■□□ 2.71
VEGFA-207ENST00000413642 CAP1Q01518 475 aa31.99■■■□□ 2.71
VEGFA-207ENST00000413642 TTF1Q15361 905 aaPredicted RBP31.99■■■□□ 2.71
VEGFA-207ENST00000413642 SLC4A8Q2Y0W8 1093 aa31.99■■■□□ 2.71
VEGFA-207ENST00000413642 CD99L2Q8TCZ2 262 aa31.99■■■□□ 2.71
VEGFA-207ENST00000413642 PDE6AP16499 860 aa31.98■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms