RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 LDLRAD1Q5T700 205 aa27.08■■□□□ 1.93
PTCD3-203ENST00000409783 VEGFBP49765 207 aa27.07■■□□□ 1.92
PTCD3-203ENST00000409783 ANGEL1Q9UNK9 670 aaKnown RBP27.07■■□□□ 1.92
PTCD3-203ENST00000409783 ATRNL1Q5VV63 1379 aa27.07■■□□□ 1.92
PTCD3-203ENST00000409783 COL2A1P02458 1487 aaPredicted RBP27.06■■□□□ 1.92
PTCD3-203ENST00000409783 DDTLA6NHG4 134 aaPredicted RBP27.06■■□□□ 1.92
PTCD3-203ENST00000409783 PPP1R12BO60237 982 aaPredicted RBP27.06■■□□□ 1.92
PTCD3-203ENST00000409783 TTLL12Q14166 644 aaPredicted RBP27.06■■□□□ 1.92
PTCD3-203ENST00000409783 CYP4F22Q6NT55 531 aa27.06■■□□□ 1.92
PTCD3-203ENST00000409783 ARMC9Q7Z3E5 817 aa27.06■■□□□ 1.92
PTCD3-203ENST00000409783 RGMBQ6NW40 437 aa27.05■■□□□ 1.92
PTCD3-203ENST00000409783 CERS3Q8IU89 383 aa27.05■■□□□ 1.92
PTCD3-203ENST00000409783 TGFBRAP1Q8WUH2 860 aa27.05■■□□□ 1.92
PTCD3-203ENST00000409783 OSBPL5Q9H0X9 879 aaPredicted RBP27.05■■□□□ 1.92
PTCD3-203ENST00000409783 THSD7BQ9C0I4 1608 aa27.05■■□□□ 1.92
PTCD3-203ENST00000409783 MAGEB6P1A0A0J9YX57 407 aa27.04■■□□□ 1.92
PTCD3-203ENST00000409783 NEFLP07196 543 aa27.04■■□□□ 1.92
PTCD3-203ENST00000409783 ZSCAN25Q6NSZ9 544 aa27.04■■□□□ 1.92
PTCD3-203ENST00000409783 CAPNS2Q96L46 248 aa27.04■■□□□ 1.92
PTCD3-203ENST00000409783 SIPA1L1O43166 1804 aa27.04■■□□□ 1.92
PTCD3-203ENST00000409783 FAM155AB1AL88 458 aaPredicted RBP27.03■■□□□ 1.92
PTCD3-203ENST00000409783 FLT1P17948 1338 aa27.03■■□□□ 1.92
PTCD3-203ENST00000409783 WDR33Q9C0J8 1336 aaKnown RBP27.03■■□□□ 1.92
PTCD3-203ENST00000409783 MYH1P12882 1939 aa27.02■■□□□ 1.92
PTCD3-203ENST00000409783 DDX60LQ5H9U9 1706 aaKnown RBP27.02■■□□□ 1.92
PTCD3-203ENST00000409783 RNF113AO15541 343 aaKnown RBP27.02■■□□□ 1.92
PTCD3-203ENST00000409783 MAP3K10Q02779 954 aa27.02■■□□□ 1.92
PTCD3-203ENST00000409783 MAPKAPK5Q8IW41 473 aa27.02■■□□□ 1.92
PTCD3-203ENST00000409783 LCORLQ8N3X6 602 aa27.02■■□□□ 1.92
PTCD3-203ENST00000409783 JMYQ8N9B5 988 aa27.02■■□□□ 1.92
PTCD3-203ENST00000409783 HOOK2Q96ED9 719 aa27.02■■□□□ 1.92
PTCD3-203ENST00000409783 CSRNP1Q96S65 589 aa27.02■■□□□ 1.92
PTCD3-203ENST00000409783 PUS7LQ9H0K6 701 aaKnown RBP27.02■■□□□ 1.92
PTCD3-203ENST00000409783 IREB2P48200 963 aaKnown RBP27.01■■□□□ 1.91
PTCD3-203ENST00000409783 PAXIP1Q6ZW49 1069 aaPredicted RBP27.01■■□□□ 1.91
PTCD3-203ENST00000409783 MIGA2Q7L4E1 593 aa27.01■■□□□ 1.91
PTCD3-203ENST00000409783 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.01■■□□□ 1.91
PTCD3-203ENST00000409783 UNCXA6NJT0 531 aa27■■□□□ 1.91
PTCD3-203ENST00000409783 ZFYP08048 801 aaPredicted RBP27■■□□□ 1.91
PTCD3-203ENST00000409783 SLURP2P0DP57 97 aa27■■□□□ 1.91
PTCD3-203ENST00000409783 ECE1P42892 770 aa27■■□□□ 1.91
PTCD3-203ENST00000409783 ZNF157P51786 506 aaPredicted RBP27■■□□□ 1.91
PTCD3-203ENST00000409783 PPP1R3FQ6ZSY5 799 aaPredicted RBP27■■□□□ 1.91
PTCD3-203ENST00000409783 CENPQQ7L2Z9 268 aaPredicted RBP27■■□□□ 1.91
PTCD3-203ENST00000409783 RASAL3Q86YV0 1011 aa27■■□□□ 1.91
PTCD3-203ENST00000409783 ZSCAN29Q8IWY8 852 aaPredicted RBP27■■□□□ 1.91
PTCD3-203ENST00000409783 EVI5LQ96CN4 794 aa27■■□□□ 1.91
PTCD3-203ENST00000409783 CLMNQ96JQ2 1002 aa27■■□□□ 1.91
PTCD3-203ENST00000409783 ARMT1Q9H993 441 aa27■■□□□ 1.91
PTCD3-203ENST00000409783 MBD4O95243 580 aa26.99■■□□□ 1.91
PTCD3-203ENST00000409783 SLC10A3P09131 477 aa26.99■■□□□ 1.91
PTCD3-203ENST00000409783 DCAF15Q66K64 600 aa26.99■■□□□ 1.91
PTCD3-203ENST00000409783 APPBP2Q92624 585 aa26.99■■□□□ 1.91
PTCD3-203ENST00000409783 OSBP2Q969R2 916 aa26.99■■□□□ 1.91
PTCD3-203ENST00000409783 FSD1Q9BTV5 496 aa26.99■■□□□ 1.91
PTCD3-203ENST00000409783 ZNF112Q9UJU3 913 aa26.99■■□□□ 1.91
PTCD3-203ENST00000409783 NAV1Q8NEY1 1877 aa26.99■■□□□ 1.91
PTCD3-203ENST00000409783 ANKRD13AQ8IZ07 590 aa26.98■■□□□ 1.91
PTCD3-203ENST00000409783 CCDC102AQ96A19 550 aa26.98■■□□□ 1.91
PTCD3-203ENST00000409783 ZNF341Q9BYN7 854 aa26.98■■□□□ 1.91
PTCD3-203ENST00000409783 CRNKL1Q9BZJ0 848 aaKnown RBP26.98■■□□□ 1.91
PTCD3-203ENST00000409783 AOC2O75106 756 aa26.97■■□□□ 1.91
PTCD3-203ENST00000409783 GRM1Q13255 1194 aa26.97■■□□□ 1.91
PTCD3-203ENST00000409783 ZIC5Q96T25 663 aa26.97■■□□□ 1.91
PTCD3-203ENST00000409783 DHX36Q9H2U1 1008 aaKnown RBP26.97■■□□□ 1.91
PTCD3-203ENST00000409783 TBC1D12O60347 775 aa26.96■■□□□ 1.91
PTCD3-203ENST00000409783 USP5P45974 858 aa26.96■■□□□ 1.91
PTCD3-203ENST00000409783 MAP3K9P80192 1104 aa26.96■■□□□ 1.91
PTCD3-203ENST00000409783 ZMYM1Q5SVZ6 1142 aa26.96■■□□□ 1.91
PTCD3-203ENST00000409783 PALD1Q9ULE6 856 aa26.96■■□□□ 1.91
PTCD3-203ENST00000409783 PHF20L1A8MW92 1017 aa26.95■■□□□ 1.9
PTCD3-203ENST00000409783 PRKAB2O43741 272 aa26.95■■□□□ 1.9
PTCD3-203ENST00000409783 LRRFIP1Q32MZ4 808 aaKnown RBP26.95■■□□□ 1.9
PTCD3-203ENST00000409783 SDR42E1Q8WUS8 393 aa26.95■■□□□ 1.9
PTCD3-203ENST00000409783 CCDC136Q96JN2 1154 aa26.95■■□□□ 1.9
PTCD3-203ENST00000409783 WRNIP1Q96S55 665 aa26.95■■□□□ 1.9
PTCD3-203ENST00000409783 STRBPQ96SI9 672 aaKnown RBP26.95■■□□□ 1.9
PTCD3-203ENST00000409783 SAP30BPQ9UHR5 308 aaKnown RBP26.95■■□□□ 1.9
PTCD3-203ENST00000409783 BAZ2AQ9UIF9 1905 aaKnown RBP26.94■■□□□ 1.9
PTCD3-203ENST00000409783 LAMB1P07942 1786 aa26.94■■□□□ 1.9
PTCD3-203ENST00000409783 M0R2C6 588 aa26.94■■□□□ 1.9
PTCD3-203ENST00000409783 INPP5BP32019 993 aa26.94■■□□□ 1.9
PTCD3-203ENST00000409783 NOGQ13253 232 aa26.94■■□□□ 1.9
PTCD3-203ENST00000409783 VGLL4Q14135 290 aa26.94■■□□□ 1.9
PTCD3-203ENST00000409783 ERICH6BQ5W0A0 696 aa26.94■■□□□ 1.9
PTCD3-203ENST00000409783 METTL16Q86W50 562 aaKnown RBP26.94■■□□□ 1.9
PTCD3-203ENST00000409783 TICAM2Q86XR7 235 aa26.94■■□□□ 1.9
PTCD3-203ENST00000409783 AIDAQ96BJ3 306 aa26.94■■□□□ 1.9
PTCD3-203ENST00000409783 SLC10A4Q96EP9 437 aa26.94■■□□□ 1.9
PTCD3-203ENST00000409783 SEC62Q99442 399 aaKnown RBP26.94■■□□□ 1.9
PTCD3-203ENST00000409783 DCP1AQ9NPI6 582 aaPredicted RBP26.94■■□□□ 1.9
PTCD3-203ENST00000409783 PI4KBQ9UBF8 816 aa26.94■■□□□ 1.9
PTCD3-203ENST00000409783 MAP2K2P36507 400 aa26.93■■□□□ 1.9
PTCD3-203ENST00000409783 ZKSCAN4Q969J2 545 aaPredicted RBP26.93■■□□□ 1.9
PTCD3-203ENST00000409783 SNCAIPQ9Y6H5 919 aa26.93■■□□□ 1.9
PTCD3-203ENST00000409783 FAM196BA6NMK8 535 aa26.92■■□□□ 1.9
PTCD3-203ENST00000409783 TRIM6-TRIM34B2RNG4 842 aa26.92■■□□□ 1.9
PTCD3-203ENST00000409783 GSPT1P15170 499 aaKnown RBP26.92■■□□□ 1.9
PTCD3-203ENST00000409783 TTC22Q5TAA0 569 aa26.92■■□□□ 1.9
PTCD3-203ENST00000409783 DNAJC18Q9H819 358 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms