RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 GJA5P36382 358 aa17.83■□□□□ 0.44
NIF3L1-205ENST00000409588 RGS19P49795 217 aa17.83■□□□□ 0.44
NIF3L1-205ENST00000409588 MAP3K10Q02779 954 aa17.83■□□□□ 0.44
NIF3L1-205ENST00000409588 TCP10Q12799 353 aa17.83■□□□□ 0.44
NIF3L1-205ENST00000409588 ARHGEF6Q15052 776 aa17.83■□□□□ 0.44
NIF3L1-205ENST00000409588 TTC39AQ5SRH9 613 aa17.83■□□□□ 0.44
NIF3L1-205ENST00000409588 CEP85Q6P2H3 762 aa17.83■□□□□ 0.44
NIF3L1-205ENST00000409588 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.83■□□□□ 0.44
NIF3L1-205ENST00000409588 NSUN4Q96CB9 384 aaKnown RBP17.83■□□□□ 0.44
NIF3L1-205ENST00000409588 LRP2BPQ9P2M1 347 aa17.83■□□□□ 0.44
NIF3L1-205ENST00000409588 RCAN3Q9UKA8 241 aa17.83■□□□□ 0.44
NIF3L1-205ENST00000409588 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.83■□□□□ 0.44
NIF3L1-205ENST00000409588 IGF2BP3O00425 579 aaKnown RBP eCLIP17.82■□□□□ 0.44
NIF3L1-205ENST00000409588 HMMRO75330 724 aa17.82■□□□□ 0.44
NIF3L1-205ENST00000409588 NFIAQ12857 509 aa17.82■□□□□ 0.44
NIF3L1-205ENST00000409588 PPIL2Q13356 520 aa17.82■□□□□ 0.44
NIF3L1-205ENST00000409588 SNAPC2Q13487 334 aa17.82■□□□□ 0.44
NIF3L1-205ENST00000409588 MIGA2Q7L4E1 593 aa17.82■□□□□ 0.44
NIF3L1-205ENST00000409588 PANK1Q8TE04 598 aa17.82■□□□□ 0.44
NIF3L1-205ENST00000409588 RAI14Q9P0K7 980 aa17.82■□□□□ 0.44
NIF3L1-205ENST00000409588 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.82■□□□□ 0.44
NIF3L1-205ENST00000409588 BAG3O95817 575 aa17.81■□□□□ 0.44
NIF3L1-205ENST00000409588 PLCG2P16885 1265 aa17.81■□□□□ 0.44
NIF3L1-205ENST00000409588 MCAMP43121 646 aa17.81■□□□□ 0.44
NIF3L1-205ENST00000409588 BTDP43251 543 aa17.81■□□□□ 0.44
NIF3L1-205ENST00000409588 RGS3P49796 1198 aa17.81■□□□□ 0.44
NIF3L1-205ENST00000409588 PDE3AQ14432 1141 aa17.81■□□□□ 0.44
NIF3L1-205ENST00000409588 NOL9Q5SY16 702 aaKnown RBP17.81■□□□□ 0.44
NIF3L1-205ENST00000409588 ZKSCAN4Q969J2 545 aaPredicted RBP17.81■□□□□ 0.44
NIF3L1-205ENST00000409588 OTUD5Q96G74 571 aa17.81■□□□□ 0.44
NIF3L1-205ENST00000409588 PTPN18Q99952 460 aa17.81■□□□□ 0.44
NIF3L1-205ENST00000409588 NOL10Q9BSC4 688 aaKnown RBP17.81■□□□□ 0.44
NIF3L1-205ENST00000409588 C1orf115Q9H7X2 142 aa17.81■□□□□ 0.44
NIF3L1-205ENST00000409588 ZFYVE28Q9HCC9 887 aa17.81■□□□□ 0.44
NIF3L1-205ENST00000409588 SNCAIPQ9Y6H5 919 aa17.81■□□□□ 0.44
NIF3L1-205ENST00000409588 LAMB1P07942 1786 aa17.81■□□□□ 0.44
NIF3L1-205ENST00000409588 CCL15-CCL14A0A0B4J2E2 113 aa17.8■□□□□ 0.44
NIF3L1-205ENST00000409588 TBC1D12O60347 775 aa17.8■□□□□ 0.44
NIF3L1-205ENST00000409588 CCL15Q16663 113 aa17.8■□□□□ 0.44
NIF3L1-205ENST00000409588 CERS3Q8IU89 383 aa17.8■□□□□ 0.44
NIF3L1-205ENST00000409588 ERO1AQ96HE7 468 aa17.8■□□□□ 0.44
NIF3L1-205ENST00000409588 ZBTB40Q9NUA8 1239 aa17.8■□□□□ 0.44
NIF3L1-205ENST00000409588 FBXO46Q6PJ61 603 aaPredicted RBP17.79■□□□□ 0.44
NIF3L1-205ENST00000409588 TBC1D9Q6ZT07 1266 aa17.79■□□□□ 0.44
NIF3L1-205ENST00000409588 ZSCAN29Q8IWY8 852 aaPredicted RBP17.79■□□□□ 0.44
NIF3L1-205ENST00000409588 DBNDD2Q9BQY9 259 aa17.79■□□□□ 0.44
NIF3L1-205ENST00000409588 CXCL11O14625 94 aa17.78■□□□□ 0.44
NIF3L1-205ENST00000409588 IRF6O14896 467 aa17.78■□□□□ 0.44
NIF3L1-205ENST00000409588 RHBDL3P58872 404 aa17.78■□□□□ 0.44
NIF3L1-205ENST00000409588 PPP4CP60510 307 aa17.78■□□□□ 0.44
NIF3L1-205ENST00000409588 SP3Q02447 781 aa17.78■□□□□ 0.44
NIF3L1-205ENST00000409588 CRHR2Q13324 411 aa17.78■□□□□ 0.44
NIF3L1-205ENST00000409588 BRI3BPQ8WY22 251 aa17.78■□□□□ 0.44
NIF3L1-205ENST00000409588 EAF2Q96CJ1 260 aaPredicted RBP17.78■□□□□ 0.44
NIF3L1-205ENST00000409588 R3HDMLQ9H3Y0 253 aa17.78■□□□□ 0.44
NIF3L1-205ENST00000409588 MYH2Q9UKX2 1941 aa17.78■□□□□ 0.44
NIF3L1-205ENST00000409588 PHF20L1A8MW92 1017 aa17.77■□□□□ 0.44
NIF3L1-205ENST00000409588 CTNND1O60716 968 aaKnown RBP17.77■□□□□ 0.44
NIF3L1-205ENST00000409588 RAB11FIP3O75154 756 aa17.77■□□□□ 0.44
NIF3L1-205ENST00000409588 NAA16Q6N069 864 aaPredicted RBP17.77■□□□□ 0.44
NIF3L1-205ENST00000409588 PI16Q6UXB8 463 aa17.77■□□□□ 0.44
NIF3L1-205ENST00000409588 ZFPM1Q8IX07 1006 aa17.77■□□□□ 0.44
NIF3L1-205ENST00000409588 DHX36Q9H2U1 1008 aaKnown RBP17.77■□□□□ 0.44
NIF3L1-205ENST00000409588 DBNLQ9UJU6 430 aaKnown RBP17.77■□□□□ 0.44
NIF3L1-205ENST00000409588 KCNH4Q9UQ05 1017 aa17.77■□□□□ 0.44
NIF3L1-205ENST00000409588 CYP2E1P05181 493 aaPredicted RBP17.76■□□□□ 0.43
NIF3L1-205ENST00000409588 INPP5BP32019 993 aa17.76■□□□□ 0.43
NIF3L1-205ENST00000409588 TAF1CQ15572 869 aaPredicted RBP17.76■□□□□ 0.43
NIF3L1-205ENST00000409588 CLASRPQ8N2M8 674 aaKnown RBP17.76■□□□□ 0.43
NIF3L1-205ENST00000409588 ZNF384Q8TF68 577 aa17.76■□□□□ 0.43
NIF3L1-205ENST00000409588 KIF1BPQ96EK5 621 aa17.76■□□□□ 0.43
NIF3L1-205ENST00000409588 PICK1Q9NRD5 415 aa17.76■□□□□ 0.43
NIF3L1-205ENST00000409588 COG6Q9Y2V7 657 aa17.76■□□□□ 0.43
NIF3L1-205ENST00000409588 RFX7Q2KHR2 1363 aa17.76■□□□□ 0.43
NIF3L1-205ENST00000409588 ATRNL1Q5VV63 1379 aa17.76■□□□□ 0.43
NIF3L1-205ENST00000409588 ANKRD23Q86SG2 305 aa17.75■□□□□ 0.43
NIF3L1-205ENST00000409588 SCYL3Q8IZE3 742 aa17.75■□□□□ 0.43
NIF3L1-205ENST00000409588 TBC1D2Q9BYX2 928 aa17.75■□□□□ 0.43
NIF3L1-205ENST00000409588 CCDC8Q9H0W5 538 aaPredicted RBP17.75■□□□□ 0.43
NIF3L1-205ENST00000409588 HPS5Q9UPZ3 1129 aa17.75■□□□□ 0.43
NIF3L1-205ENST00000409588 COL2A1P02458 1487 aaPredicted RBP17.75■□□□□ 0.43
NIF3L1-205ENST00000409588 DDTLA6NHG4 134 aaPredicted RBP17.74■□□□□ 0.43
NIF3L1-205ENST00000409588 TLR2O60603 784 aa17.74■□□□□ 0.43
NIF3L1-205ENST00000409588 GNRH1P01148 92 aa17.74■□□□□ 0.43
NIF3L1-205ENST00000409588 MLLT1Q03111 559 aaPredicted RBP17.74■□□□□ 0.43
NIF3L1-205ENST00000409588 PICALMQ13492 652 aa17.74■□□□□ 0.43
NIF3L1-205ENST00000409588 TTF1Q15361 905 aaPredicted RBP17.74■□□□□ 0.43
NIF3L1-205ENST00000409588 SH3BP5LQ7L8J4 393 aa17.74■□□□□ 0.43
NIF3L1-205ENST00000409588 FASTKD5Q7L8L6 764 aaKnown RBP17.74■□□□□ 0.43
NIF3L1-205ENST00000409588 FAM43AQ8N2R8 423 aa17.74■□□□□ 0.43
NIF3L1-205ENST00000409588 RHPN1Q8TCX5 695 aa17.74■□□□□ 0.43
NIF3L1-205ENST00000409588 DDX4Q9NQI0 724 aaKnown RBP17.74■□□□□ 0.43
NIF3L1-205ENST00000409588 SNRKQ9NRH2 765 aa17.74■□□□□ 0.43
NIF3L1-205ENST00000409588 PI4KBQ9UBF8 816 aa17.74■□□□□ 0.43
NIF3L1-205ENST00000409588 HERC5Q9UII4 1024 aaKnown RBP17.74■□□□□ 0.43
NIF3L1-205ENST00000409588 EXOC6BQ9Y2D4 811 aa17.74■□□□□ 0.43
NIF3L1-205ENST00000409588 OTOFQ9HC10 1997 aa17.73■□□□□ 0.43
NIF3L1-205ENST00000409588 AK9Q5TCS8 1911 aa17.73■□□□□ 0.43
NIF3L1-205ENST00000409588 BTBD19C9JJ37 291 aa17.73■□□□□ 0.43
NIF3L1-205ENST00000409588 ZAP70P43403 619 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms