RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 USP2O75604 605 aaPredicted RBP24.01■■□□□ 1.43
PDLIM2-207ENST00000409417 IREB2P48200 963 aaKnown RBP24.01■■□□□ 1.43
PDLIM2-207ENST00000409417 DYNLL1P63167 89 aaKnown RBP24.01■■□□□ 1.43
PDLIM2-207ENST00000409417 ZSCAN25Q6NSZ9 544 aa24.01■■□□□ 1.43
PDLIM2-207ENST00000409417 UNCXA6NJT0 531 aa24■■□□□ 1.43
PDLIM2-207ENST00000409417 NEFLP07196 543 aa24■■□□□ 1.43
PDLIM2-207ENST00000409417 ZNF157P51786 506 aaPredicted RBP24■■□□□ 1.43
PDLIM2-207ENST00000409417 UBE3CQ15386 1083 aa24■■□□□ 1.43
PDLIM2-207ENST00000409417 JMYQ8N9B5 988 aa24■■□□□ 1.43
PDLIM2-207ENST00000409417 CCDC102AQ96A19 550 aa24■■□□□ 1.43
PDLIM2-207ENST00000409417 RIOK1Q9BRS2 568 aaKnown RBP24■■□□□ 1.43
PDLIM2-207ENST00000409417 DCAF15Q66K64 600 aa24■■□□□ 1.43
PDLIM2-207ENST00000409417 SH3BP5LQ7L8J4 393 aa24■■□□□ 1.43
PDLIM2-207ENST00000409417 PLEKHM2Q8IWE5 1019 aa24■■□□□ 1.43
PDLIM2-207ENST00000409417 ATRNL1Q5VV63 1379 aa23.99■■□□□ 1.43
PDLIM2-207ENST00000409417 MAGEB6P1A0A0J9YX57 407 aa23.99■■□□□ 1.43
PDLIM2-207ENST00000409417 GRM1Q13255 1194 aa23.99■■□□□ 1.43
PDLIM2-207ENST00000409417 ZSCAN29Q8IWY8 852 aaPredicted RBP23.99■■□□□ 1.43
PDLIM2-207ENST00000409417 TGFBRAP1Q8WUH2 860 aa23.99■■□□□ 1.43
PDLIM2-207ENST00000409417 CSRNP1Q96S65 589 aa23.99■■□□□ 1.43
PDLIM2-207ENST00000409417 OSBPL5Q9H0X9 879 aaPredicted RBP23.99■■□□□ 1.43
PDLIM2-207ENST00000409417 DDTLA6NHG4 134 aaPredicted RBP23.98■■□□□ 1.43
PDLIM2-207ENST00000409417 OSBPL3Q9H4L5 887 aa23.98■■□□□ 1.43
PDLIM2-207ENST00000409417 COL2A1P02458 1487 aaPredicted RBP23.97■■□□□ 1.43
PDLIM2-207ENST00000409417 FAM155AB1AL88 458 aaPredicted RBP23.97■■□□□ 1.43
PDLIM2-207ENST00000409417 LRRFIP1Q32MZ4 808 aaKnown RBP23.97■■□□□ 1.43
PDLIM2-207ENST00000409417 MIGA2Q7L4E1 593 aa23.97■■□□□ 1.43
PDLIM2-207ENST00000409417 FLT1P17948 1338 aa23.96■■□□□ 1.43
PDLIM2-207ENST00000409417 CHGBP05060 677 aa23.96■■□□□ 1.43
PDLIM2-207ENST00000409417 ZFYP08048 801 aaPredicted RBP23.96■■□□□ 1.43
PDLIM2-207ENST00000409417 NOGQ13253 232 aa23.96■■□□□ 1.43
PDLIM2-207ENST00000409417 SLFNL1Q499Z3 407 aa23.96■■□□□ 1.43
PDLIM2-207ENST00000409417 MAPKAPK5Q8IW41 473 aa23.96■■□□□ 1.43
PDLIM2-207ENST00000409417 ANKRD13AQ8IZ07 590 aa23.96■■□□□ 1.43
PDLIM2-207ENST00000409417 RNF113AO15541 343 aaKnown RBP23.95■■□□□ 1.42
PDLIM2-207ENST00000409417 SLC10A3P09131 477 aa23.95■■□□□ 1.42
PDLIM2-207ENST00000409417 MAP2K2P36507 400 aa23.95■■□□□ 1.42
PDLIM2-207ENST00000409417 MAP3K9P80192 1104 aa23.95■■□□□ 1.42
PDLIM2-207ENST00000409417 RASAL3Q86YV0 1011 aa23.95■■□□□ 1.42
PDLIM2-207ENST00000409417 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.95■■□□□ 1.429e-7■□□□□ 8.4
PDLIM2-207ENST00000409417 SLC10A4Q96EP9 437 aa23.95■■□□□ 1.42
PDLIM2-207ENST00000409417 ZNF341Q9BYN7 854 aa23.95■■□□□ 1.42
PDLIM2-207ENST00000409417 DHX36Q9H2U1 1008 aaKnown RBP23.95■■□□□ 1.42
PDLIM2-207ENST00000409417 MAP3K10Q02779 954 aa23.94■■□□□ 1.42
PDLIM2-207ENST00000409417 EVI5LQ96CN4 794 aa23.94■■□□□ 1.42
PDLIM2-207ENST00000409417 CLMNQ96JQ2 1002 aa23.94■■□□□ 1.42
PDLIM2-207ENST00000409417 FSD1Q9BTV5 496 aa23.94■■□□□ 1.42
PDLIM2-207ENST00000409417 CRNKL1Q9BZJ0 848 aaKnown RBP23.94■■□□□ 1.42
PDLIM2-207ENST00000409417 AOC2O75106 756 aa23.94■■□□□ 1.42
PDLIM2-207ENST00000409417 USP5P45974 858 aa23.94■■□□□ 1.42
PDLIM2-207ENST00000409417 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.94■■□□□ 1.42
PDLIM2-207ENST00000409417 LCORLQ8N3X6 602 aa23.94■■□□□ 1.42
PDLIM2-207ENST00000409417 WRNIP1Q96S55 665 aa23.94■■□□□ 1.42
PDLIM2-207ENST00000409417 MBD4O95243 580 aa23.93■■□□□ 1.42
PDLIM2-207ENST00000409417 PUS7LQ9H0K6 701 aaKnown RBP23.93■■□□□ 1.42
PDLIM2-207ENST00000409417 ARMT1Q9H993 441 aa23.93■■□□□ 1.42
PDLIM2-207ENST00000409417 ZNF112Q9UJU3 913 aa23.93■■□□□ 1.42
PDLIM2-207ENST00000409417 AK9Q5TCS8 1911 aa23.93■■□□□ 1.42
PDLIM2-207ENST00000409417 TBC1D12O60347 775 aa23.92■■□□□ 1.42
PDLIM2-207ENST00000409417 PDE4AP27815 886 aa23.92■■□□□ 1.42
PDLIM2-207ENST00000409417 APPBP2Q92624 585 aa23.92■■□□□ 1.42
PDLIM2-207ENST00000409417 AIDAQ96BJ3 306 aa23.92■■□□□ 1.42
PDLIM2-207ENST00000409417 PI4KBQ9UBF8 816 aa23.92■■□□□ 1.42
PDLIM2-207ENST00000409417 CSADQ9Y600 493 aa23.92■■□□□ 1.42
PDLIM2-207ENST00000409417 VGLL4Q14135 290 aa23.91■■□□□ 1.42
PDLIM2-207ENST00000409417 CENPQQ7L2Z9 268 aaPredicted RBP23.91■■□□□ 1.42
PDLIM2-207ENST00000409417 TICAM2Q86XR7 235 aa23.91■■□□□ 1.42
PDLIM2-207ENST00000409417 PALD1Q9ULE6 856 aa23.91■■□□□ 1.42
PDLIM2-207ENST00000409417 MYH7P12883 1935 aa23.9■■□□□ 1.42
PDLIM2-207ENST00000409417 OSBP2Q969R2 916 aa23.9■■□□□ 1.42
PDLIM2-207ENST00000409417 ZIC5Q96T25 663 aa23.9■■□□□ 1.42
PDLIM2-207ENST00000409417 SAP30BPQ9UHR5 308 aaKnown RBP23.9■■□□□ 1.42
PDLIM2-207ENST00000409417 PHF20L1A8MW92 1017 aa23.89■■□□□ 1.42
PDLIM2-207ENST00000409417 MAP2K1Q02750 393 aaPredicted RBP23.89■■□□□ 1.42
PDLIM2-207ENST00000409417 SPRYD7Q5W111 196 aa23.89■■□□□ 1.42
PDLIM2-207ENST00000409417 ZKSCAN4Q969J2 545 aaPredicted RBP23.89■■□□□ 1.42
PDLIM2-207ENST00000409417 HERC5Q9UII4 1024 aaKnown RBP23.89■■□□□ 1.42
PDLIM2-207ENST00000409417 INPP5BP32019 993 aa23.88■■□□□ 1.41
PDLIM2-207ENST00000409417 FOXP4Q8IVH2 680 aaPredicted RBP23.88■■□□□ 1.41
PDLIM2-207ENST00000409417 STRBPQ96SI9 672 aaKnown RBP23.88■■□□□ 1.41
PDLIM2-207ENST00000409417 ELP3Q9H9T3 547 aa23.88■■□□□ 1.41
PDLIM2-207ENST00000409417 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.88■■□□□ 1.41
PDLIM2-207ENST00000409417 DCP1AQ9NPI6 582 aaPredicted RBP23.88■■□□□ 1.41
PDLIM2-207ENST00000409417 CDK5RAP2Q96SN8 1893 aa23.88■■□□□ 1.41
PDLIM2-207ENST00000409417 FOCADQ5VW36 1801 aa23.88■■□□□ 1.41
PDLIM2-207ENST00000409417 TRIM6-TRIM34B2RNG4 842 aa23.87■■□□□ 1.41
PDLIM2-207ENST00000409417 PRKAB2O43741 272 aa23.87■■□□□ 1.41
PDLIM2-207ENST00000409417 HLA-DOAP06340 250 aa23.87■■□□□ 1.41
PDLIM2-207ENST00000409417 ZBTB48P10074 688 aaPredicted RBP23.87■■□□□ 1.41
PDLIM2-207ENST00000409417 KIF23Q02241 960 aaPredicted RBP23.87■■□□□ 1.41
PDLIM2-207ENST00000409417 ZMYM1Q5SVZ6 1142 aa23.87■■□□□ 1.41
PDLIM2-207ENST00000409417 METTL16Q86W50 562 aaKnown RBP23.87■■□□□ 1.41
PDLIM2-207ENST00000409417 SDR42E1Q8WUS8 393 aa23.87■■□□□ 1.41
PDLIM2-207ENST00000409417 WNK4Q96J92 1243 aa23.87■■□□□ 1.41
PDLIM2-207ENST00000409417 CCDC136Q96JN2 1154 aa23.87■■□□□ 1.41
PDLIM2-207ENST00000409417 ATP8A2Q9NTI2 1148 aa23.87■■□□□ 1.41
PDLIM2-207ENST00000409417 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.87■■□□□ 1.41
PDLIM2-207ENST00000409417 SNCAIPQ9Y6H5 919 aa23.87■■□□□ 1.41
PDLIM2-207ENST00000409417 THSD7BQ9C0I4 1608 aa23.87■■□□□ 1.41
PDLIM2-207ENST00000409417 SLURP2P0DP57 97 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms