RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 USP54Q70EL1 1684 aa13.69□□□□□ -0.22
PCNX4-204ENST00000406949 AFMP43652 599 aa13.69□□□□□ -0.22
PCNX4-204ENST00000406949 IFIT1BQ5T764 474 aaKnown RBP13.69□□□□□ -0.22
PCNX4-204ENST00000406949 CATIPQ7Z7H3 387 aa13.69□□□□□ -0.22
PCNX4-204ENST00000406949 PLA2G4DQ86XP0 818 aa13.69□□□□□ -0.22
PCNX4-204ENST00000406949 KCNH3Q9ULD8 1083 aa13.69□□□□□ -0.22
PCNX4-204ENST00000406949 ZNF142P52746 1687 aaPredicted RBP13.68□□□□□ -0.22
PCNX4-204ENST00000406949 A0A1W2PQ27 194 aa13.68□□□□□ -0.22
PCNX4-204ENST00000406949 A0A1W2PQ64 194 aa13.68□□□□□ -0.22
PCNX4-204ENST00000406949 A0A1W2PQD8 194 aa13.68□□□□□ -0.22
PCNX4-204ENST00000406949 IQCB1Q15051 598 aa13.68□□□□□ -0.22
PCNX4-204ENST00000406949 PARP10Q53GL7 1025 aa13.68□□□□□ -0.22
PCNX4-204ENST00000406949 LRRC8AQ8IWT6 810 aa13.68□□□□□ -0.22
PCNX4-204ENST00000406949 TRPM3Q9HCF6 1732 aaPredicted RBP13.68□□□□□ -0.22
PCNX4-204ENST00000406949 ERVV-1B6SEH8 477 aa13.68□□□□□ -0.22
PCNX4-204ENST00000406949 NR5A1Q13285 461 aa13.68□□□□□ -0.22
PCNX4-204ENST00000406949 CCAR2Q8N163 923 aaKnown RBP13.68□□□□□ -0.22
PCNX4-204ENST00000406949 KRI1Q8N9T8 703 aaKnown RBP13.68□□□□□ -0.22
PCNX4-204ENST00000406949 FOXP2O15409 715 aa13.68□□□□□ -0.22
PCNX4-204ENST00000406949 NEMFO60524 1076 aa13.68□□□□□ -0.22
PCNX4-204ENST00000406949 CMA1P23946 247 aa13.68□□□□□ -0.22
PCNX4-204ENST00000406949 GSDMDP57764 484 aa13.68□□□□□ -0.22
PCNX4-204ENST00000406949 MAPK8IP2Q13387 824 aaPredicted RBP13.68□□□□□ -0.22
PCNX4-204ENST00000406949 SLC39A14Q15043 492 aa13.68□□□□□ -0.22
PCNX4-204ENST00000406949 ZNF827Q17R98 1081 aa13.68□□□□□ -0.22
PCNX4-204ENST00000406949 NBPF5PQ86XG9 351 aaPredicted RBP13.68□□□□□ -0.22
PCNX4-204ENST00000406949 VPS54Q9P1Q0 977 aa13.68□□□□□ -0.22
PCNX4-204ENST00000406949 TUBGCP6Q96RT7 1819 aa13.68□□□□□ -0.22
PCNX4-204ENST00000406949 ADAMTSL3P82987 1691 aa13.68□□□□□ -0.22
PCNX4-204ENST00000406949 POLR2DO15514 142 aaKnown RBP13.67□□□□□ -0.22
PCNX4-204ENST00000406949 WDHD1O75717 1129 aaPredicted RBP13.67□□□□□ -0.22
PCNX4-204ENST00000406949 TOP1P11387 765 aaKnown RBP13.67□□□□□ -0.22
PCNX4-204ENST00000406949 GNAT2P19087 354 aa13.67□□□□□ -0.22
PCNX4-204ENST00000406949 NLRP12P59046 1061 aa13.67□□□□□ -0.22
PCNX4-204ENST00000406949 PPARAQ07869 468 aa13.67□□□□□ -0.22
PCNX4-204ENST00000406949 FAM98CQ17RN3 349 aaKnown RBP13.67□□□□□ -0.22
PCNX4-204ENST00000406949 EPB41L4AQ9HCS5 686 aaPredicted RBP13.67□□□□□ -0.22
PCNX4-204ENST00000406949 GOLGB1Q14789 3259 aaKnown RBP13.67□□□□□ -0.22
PCNX4-204ENST00000406949 KCNQ2O43526 872 aa13.67□□□□□ -0.22
PCNX4-204ENST00000406949 DYNLL1P63167 89 aaKnown RBP13.67□□□□□ -0.22
PCNX4-204ENST00000406949 ZNF654Q8IZM8 581 aa13.67□□□□□ -0.22
PCNX4-204ENST00000406949 DHX58Q96C10 678 aa13.67□□□□□ -0.22
PCNX4-204ENST00000406949 MRFAP1L1Q96HT8 127 aa13.67□□□□□ -0.22
PCNX4-204ENST00000406949 LY9Q9HBG7 655 aa13.67□□□□□ -0.22
PCNX4-204ENST00000406949 ZPR1O75312 459 aa13.67□□□□□ -0.22
PCNX4-204ENST00000406949 GUCY1A2P33402 732 aa13.67□□□□□ -0.22
PCNX4-204ENST00000406949 ENGASEQ8NFI3 743 aa13.67□□□□□ -0.22
PCNX4-204ENST00000406949 KIF18AQ8NI77 898 aa13.67□□□□□ -0.22
PCNX4-204ENST00000406949 NGLY1Q96IV0 654 aa13.67□□□□□ -0.22
PCNX4-204ENST00000406949 SPTLC3Q9NUV7 552 aa13.67□□□□□ -0.22
PCNX4-204ENST00000406949 N4BP2Q86UW6 1770 aaPredicted RBP13.66□□□□□ -0.22
PCNX4-204ENST00000406949 TULP1O00294 542 aaPredicted RBP13.66□□□□□ -0.22
PCNX4-204ENST00000406949 FANCCQ00597 558 aa13.66□□□□□ -0.22
PCNX4-204ENST00000406949 DZIP1Q86YF9 867 aaKnown RBP13.66□□□□□ -0.22
PCNX4-204ENST00000406949 NOSTRINQ8IVI9 506 aa13.66□□□□□ -0.22
PCNX4-204ENST00000406949 DHX40Q8IX18 779 aaKnown RBP13.66□□□□□ -0.22
PCNX4-204ENST00000406949 CTCFLQ8NI51 663 aaPredicted RBP13.66□□□□□ -0.22
PCNX4-204ENST00000406949 SMARCE1Q969G3 411 aa13.66□□□□□ -0.22
PCNX4-204ENST00000406949 ANKIB1Q9P2G1 1089 aa13.66□□□□□ -0.22
PCNX4-204ENST00000406949 V9GY48 417 aaPredicted RBP13.66□□□□□ -0.22
PCNX4-204ENST00000406949 GSG1L2A8MUP6 293 aa13.66□□□□□ -0.22
PCNX4-204ENST00000406949 CBFA2T2O43439 604 aa13.66□□□□□ -0.22
PCNX4-204ENST00000406949 ATP1A3P13637 1013 aa13.66□□□□□ -0.22
PCNX4-204ENST00000406949 ERFEQ4G0M1 354 aa13.66□□□□□ -0.22
PCNX4-204ENST00000406949 FAM182BQ5T319 152 aa13.66□□□□□ -0.22
PCNX4-204ENST00000406949 RBM43Q6ZSC3 357 aaKnown RBP13.66□□□□□ -0.22
PCNX4-204ENST00000406949 TRMT44Q8IYL2 757 aaKnown RBP13.66□□□□□ -0.22
PCNX4-204ENST00000406949 AATFQ9NY61 560 aaKnown RBP eCLIP13.66□□□□□ -0.22
PCNX4-204ENST00000406949 TNKSO95271 1327 aa13.66□□□□□ -0.22
PCNX4-204ENST00000406949 SALL1Q9NSC2 1324 aa13.66□□□□□ -0.22
PCNX4-204ENST00000406949 TSPY2A6NKD2 308 aa13.65□□□□□ -0.22
PCNX4-204ENST00000406949 ARID4AP29374 1257 aaPredicted RBP13.65□□□□□ -0.22
PCNX4-204ENST00000406949 C8orf37Q96NL8 207 aa13.65□□□□□ -0.22
PCNX4-204ENST00000406949 NOL10Q9BSC4 688 aaKnown RBP13.65□□□□□ -0.22
PCNX4-204ENST00000406949 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.65□□□□□ -0.22
PCNX4-204ENST00000406949 STX17P56962 302 aa13.65□□□□□ -0.22
PCNX4-204ENST00000406949 MYL5Q02045 173 aa13.65□□□□□ -0.22
PCNX4-204ENST00000406949 GOLGA8FQ08AF8 430 aa13.65□□□□□ -0.22
PCNX4-204ENST00000406949 GOLGA8DPQ0D2H9 430 aa13.65□□□□□ -0.22
PCNX4-204ENST00000406949 GRAMD1CQ8IYS0 662 aa13.65□□□□□ -0.22
PCNX4-204ENST00000406949 ZNF34Q8IZ26 560 aa13.65□□□□□ -0.22
PCNX4-204ENST00000406949 TMTC2Q8N394 836 aa13.65□□□□□ -0.22
PCNX4-204ENST00000406949 CPLX3Q8WVH0 158 aa13.65□□□□□ -0.22
PCNX4-204ENST00000406949 PHRF1Q9P1Y6 1649 aaKnown RBP13.65□□□□□ -0.22
PCNX4-204ENST00000406949 CEP131Q9UPN4 1083 aa13.65□□□□□ -0.22
PCNX4-204ENST00000406949 USP27XA6NNY8 438 aa13.65□□□□□ -0.22
PCNX4-204ENST00000406949 USP5P45974 858 aa13.65□□□□□ -0.22
PCNX4-204ENST00000406949 FAM47AQ5JRC9 791 aa13.65□□□□□ -0.22
PCNX4-204ENST00000406949 FANCBQ8NB91 859 aa13.65□□□□□ -0.22
PCNX4-204ENST00000406949 NKX2-3Q8TAU0 364 aa13.65□□□□□ -0.22
PCNX4-204ENST00000406949 ARFGEF2Q9Y6D5 1785 aa13.65□□□□□ -0.23
PCNX4-204ENST00000406949 MROH7-TTC4A0A0A0MT08 1334 aa13.64□□□□□ -0.23
PCNX4-204ENST00000406949 DEXIO95424 95 aa13.64□□□□□ -0.23
PCNX4-204ENST00000406949 NLRP5P59047 1200 aa13.64□□□□□ -0.23
PCNX4-204ENST00000406949 TICAM2Q86XR7 235 aa13.64□□□□□ -0.23
PCNX4-204ENST00000406949 IGDCC4Q8TDY8 1250 aa13.64□□□□□ -0.23
PCNX4-204ENST00000406949 STAMQ92783 540 aa13.64□□□□□ -0.23
PCNX4-204ENST00000406949 NBPF3Q9H094 633 aa13.64□□□□□ -0.23
PCNX4-204ENST00000406949 MRC1P22897 1456 aa13.64□□□□□ -0.23
PCNX4-204ENST00000406949 RIC1Q4ADV7 1423 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms