RNA–Protein interactions for RNA: ENST00000406453.3

SLC29A4-203, Transcript of solute carrier family 29 member 4, humanhuman

TSL 1 (best) BASIC

Gene SLC29A4, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC29A4-203ENST00000406453 MBD3O95983 291 aa17.12■□□□□ 0.33
SLC29A4-203ENST00000406453 LDHBP07195 334 aaKnown RBP17.12■□□□□ 0.33
SLC29A4-203ENST00000406453 SRGNP10124 158 aa17.12■□□□□ 0.33
SLC29A4-203ENST00000406453 ILDR1Q86SU0 546 aaPredicted RBP17.12■□□□□ 0.33
SLC29A4-203ENST00000406453 CCDC82Q8N4S0 544 aa17.12■□□□□ 0.33
SLC29A4-203ENST00000406453 DCP1AQ9NPI6 582 aaPredicted RBP17.12■□□□□ 0.33
SLC29A4-203ENST00000406453 ORC3Q9UBD5 711 aaPredicted RBP17.12■□□□□ 0.33
SLC29A4-203ENST00000406453 WDR19Q8NEZ3 1342 aa17.12■□□□□ 0.33
SLC29A4-203ENST00000406453 HMGN5P82970 282 aaKnown RBP17.12■□□□□ 0.33
SLC29A4-203ENST00000406453 SH3RF3Q8TEJ3 882 aaPredicted RBP17.12■□□□□ 0.33
SLC29A4-203ENST00000406453 CRAMP1Q96RY5 1269 aa17.12■□□□□ 0.33
SLC29A4-203ENST00000406453 BRIP1Q9BX63 1249 aa17.12■□□□□ 0.33
SLC29A4-203ENST00000406453 USP17L8P0C7I0 530 aa17.11■□□□□ 0.33
SLC29A4-203ENST00000406453 KRT85P78386 507 aa17.11■□□□□ 0.33
SLC29A4-203ENST00000406453 PDS5AQ29RF7 1337 aaKnown RBP17.11■□□□□ 0.33
SLC29A4-203ENST00000406453 ZBTB43O43298 467 aa17.11■□□□□ 0.33
SLC29A4-203ENST00000406453 NMT2O60551 498 aa17.11■□□□□ 0.33
SLC29A4-203ENST00000406453 L1TD1Q5T7N2 865 aaKnown RBP17.11■□□□□ 0.33
SLC29A4-203ENST00000406453 TMEM87BQ96K49 555 aa17.11■□□□□ 0.33
SLC29A4-203ENST00000406453 MXD3Q9BW11 206 aa17.11■□□□□ 0.33
SLC29A4-203ENST00000406453 KRT23Q9C075 422 aa17.11■□□□□ 0.33
SLC29A4-203ENST00000406453 COL11A2P13942 1736 aaPredicted RBP17.1■□□□□ 0.33
SLC29A4-203ENST00000406453 RANBP6O60518 1105 aaKnown RBP17.1■□□□□ 0.33
SLC29A4-203ENST00000406453 ATP2B4P23634 1241 aa17.1■□□□□ 0.33
SLC29A4-203ENST00000406453 ZNF445P59923 1031 aa17.1■□□□□ 0.33
SLC29A4-203ENST00000406453 UBE2HP62256 183 aa17.1■□□□□ 0.33
SLC29A4-203ENST00000406453 CNNM2Q9H8M5 875 aa17.1■□□□□ 0.33
SLC29A4-203ENST00000406453 PARP3Q9Y6F1 533 aa17.1■□□□□ 0.33
SLC29A4-203ENST00000406453 RBSNQ9H1K0 784 aa17.1■□□□□ 0.33
SLC29A4-203ENST00000406453 GOLGA8AA7E2F4 631 aa17.09■□□□□ 0.33
SLC29A4-203ENST00000406453 DOK7Q18PE1 504 aa17.09■□□□□ 0.33
SLC29A4-203ENST00000406453 FAM47AQ5JRC9 791 aa17.09■□□□□ 0.33
SLC29A4-203ENST00000406453 WDR66Q8TBY9 1149 aa17.09■□□□□ 0.33
SLC29A4-203ENST00000406453 LEO1Q8WVC0 666 aaPredicted RBP17.09■□□□□ 0.33
SLC29A4-203ENST00000406453 FBXW7Q969H0 707 aa17.09■□□□□ 0.33
SLC29A4-203ENST00000406453 ZNF622Q969S3 477 aaKnown RBP eCLIP17.09■□□□□ 0.33
SLC29A4-203ENST00000406453 SLC12A7Q9Y666 1083 aa17.09■□□□□ 0.33
SLC29A4-203ENST00000406453 CCDC69A6NI79 296 aa17.09■□□□□ 0.33
SLC29A4-203ENST00000406453 MRE11P49959 708 aa17.09■□□□□ 0.33
SLC29A4-203ENST00000406453 CHMP4CQ96CF2 233 aa17.09■□□□□ 0.33
SLC29A4-203ENST00000406453 SPATA32Q96LK8 384 aa17.09■□□□□ 0.33
SLC29A4-203ENST00000406453 CRNKL1Q9BZJ0 848 aaKnown RBP17.09■□□□□ 0.33
SLC29A4-203ENST00000406453 POLR3DP05423 398 aaPredicted RBP17.08■□□□□ 0.33
SLC29A4-203ENST00000406453 LIG1P18858 919 aa17.08■□□□□ 0.33
SLC29A4-203ENST00000406453 WTAPQ15007 396 aa17.08■□□□□ 0.33
SLC29A4-203ENST00000406453 NTRK3Q16288 839 aa17.08■□□□□ 0.33
SLC29A4-203ENST00000406453 SGMS1Q86VZ5 419 aa17.08■□□□□ 0.33
SLC29A4-203ENST00000406453 NUP133Q8WUM0 1156 aa17.08■□□□□ 0.33
SLC29A4-203ENST00000406453 MCM9Q9NXL9 1143 aa17.08■□□□□ 0.33
SLC29A4-203ENST00000406453 ANAPC4Q9UJX5 808 aa17.08■□□□□ 0.33
SLC29A4-203ENST00000406453 KIF28PB7ZC32 967 aa17.08■□□□□ 0.32
SLC29A4-203ENST00000406453 F8W031 263 aaPredicted RBP17.08■□□□□ 0.32
SLC29A4-203ENST00000406453 CHRNA5P30532 468 aa17.08■□□□□ 0.32
SLC29A4-203ENST00000406453 GTF2IP78347 998 aa17.08■□□□□ 0.32
SLC29A4-203ENST00000406453 MFSD14BQ5SR56 506 aa17.08■□□□□ 0.32
SLC29A4-203ENST00000406453 DYNLL2Q96FJ2 89 aa17.08■□□□□ 0.32
SLC29A4-203ENST00000406453 PGBD1Q96JS3 809 aa17.08■□□□□ 0.32
SLC29A4-203ENST00000406453 C8orf76Q96K31 380 aa17.08■□□□□ 0.32
SLC29A4-203ENST00000406453 ATP6V0A2Q9Y487 856 aa17.08■□□□□ 0.32
SLC29A4-203ENST00000406453 TNKSO95271 1327 aa17.08■□□□□ 0.32
SLC29A4-203ENST00000406453 LTBP1Q14766 1721 aa17.07■□□□□ 0.32
SLC29A4-203ENST00000406453 IL1R1P14778 569 aa17.07■□□□□ 0.32
SLC29A4-203ENST00000406453 GUCY1A2P33402 732 aa17.07■□□□□ 0.32
SLC29A4-203ENST00000406453 C15orf52Q6ZUT6 534 aaKnown RBP17.07■□□□□ 0.32
SLC29A4-203ENST00000406453 DEFB132Q7Z7B7 95 aa17.07■□□□□ 0.32
SLC29A4-203ENST00000406453 SP8Q8IXZ3 490 aa17.07■□□□□ 0.32
SLC29A4-203ENST00000406453 SAP30BPQ9UHR5 308 aaKnown RBP17.07■□□□□ 0.32
SLC29A4-203ENST00000406453 DUOX1Q9NRD9 1551 aa17.07■□□□□ 0.32
SLC29A4-203ENST00000406453 NRXN2Q9P2S2 1712 aa17.07■□□□□ 0.32
SLC29A4-203ENST00000406453 MAST2Q6P0Q8 1798 aa17.07■□□□□ 0.32
SLC29A4-203ENST00000406453 DHX16O60231 1041 aaKnown RBP17.07■□□□□ 0.32
SLC29A4-203ENST00000406453 LIFRP42702 1097 aa17.07■□□□□ 0.32
SLC29A4-203ENST00000406453 SPTY2D1Q68D10 685 aaPredicted RBP17.07■□□□□ 0.32
SLC29A4-203ENST00000406453 ENAHQ8N8S7 591 aaPredicted RBP17.07■□□□□ 0.32
SLC29A4-203ENST00000406453 RNF214Q8ND24 703 aa17.07■□□□□ 0.32
SLC29A4-203ENST00000406453 TGFBRAP1Q8WUH2 860 aa17.07■□□□□ 0.32
SLC29A4-203ENST00000406453 USP28Q96RU2 1077 aa17.07■□□□□ 0.32
SLC29A4-203ENST00000406453 KCNQ5Q9NR82 932 aa17.07■□□□□ 0.32
SLC29A4-203ENST00000406453 CAMKK2Q96RR4 588 aa17.06■□□□□ 0.32
SLC29A4-203ENST00000406453 UBAC1Q9BSL1 405 aa17.06■□□□□ 0.32
SLC29A4-203ENST00000406453 RNF41Q9H4P4 317 aaPredicted RBP17.06■□□□□ 0.32
SLC29A4-203ENST00000406453 ECM29Q5VYK3 1845 aa17.06■□□□□ 0.32
SLC29A4-203ENST00000406453 NPR1P16066 1061 aa17.06■□□□□ 0.32
SLC29A4-203ENST00000406453 SEC23AQ15436 765 aa17.06■□□□□ 0.32
SLC29A4-203ENST00000406453 MAPKAPK5Q8IW41 473 aa17.06■□□□□ 0.32
SLC29A4-203ENST00000406453 ESR2Q92731 530 aa17.06■□□□□ 0.32
SLC29A4-203ENST00000406453 LRRC37AA6NMS7 1700 aa17.06■□□□□ 0.32
SLC29A4-203ENST00000406453 hCG_1642624A0A1W2PR95 340 aa17.05■□□□□ 0.32
SLC29A4-203ENST00000406453 USP5P45974 858 aa17.05■□□□□ 0.32
SLC29A4-203ENST00000406453 SLC15A2Q16348 729 aa17.05■□□□□ 0.32
SLC29A4-203ENST00000406453 LRSAM1Q6UWE0 723 aa17.05■□□□□ 0.32
SLC29A4-203ENST00000406453 SLC44A5Q8NCS7 719 aa17.05■□□□□ 0.32
SLC29A4-203ENST00000406453 FBXO18Q8NFZ0 1043 aa17.05■□□□□ 0.32
SLC29A4-203ENST00000406453 SLC26A6Q9BXS9 759 aa17.05■□□□□ 0.32
SLC29A4-203ENST00000406453 RTFDC1Q9BY42 306 aaPredicted RBP17.05■□□□□ 0.32
SLC29A4-203ENST00000406453 GIMAP6Q6P9H5 292 aa17.05■□□□□ 0.32
SLC29A4-203ENST00000406453 FBXO41Q8TF61 875 aa17.05■□□□□ 0.32
SLC29A4-203ENST00000406453 ALG1Q9BT22 464 aa17.05■□□□□ 0.32
SLC29A4-203ENST00000406453 ZSCAN16Q9H4T2 348 aaPredicted RBP17.05■□□□□ 0.32
SLC29A4-203ENST00000406453 MYH15Q9Y2K3 1946 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms