RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 TAOK2Q9UL54 1235 aa21.28■■□□□ 1
CTNS-203ENST00000399306 SCAF8Q9UPN6 1271 aaKnown RBP21.28■■□□□ 1
CTNS-203ENST00000399306 SSC5DA1L4H1 1573 aa21.27■■□□□ 1
CTNS-203ENST00000399306 TRIM6-TRIM34B2RNG4 842 aa21.27■■□□□ 1
CTNS-203ENST00000399306 MAP3K10Q02779 954 aa21.27■■□□□ 1
CTNS-203ENST00000399306 DCAF15Q66K64 600 aa21.27■■□□□ 1
CTNS-203ENST00000399306 DLK2Q6UY11 383 aa21.27■■□□□ 1
CTNS-203ENST00000399306 SAPCD2Q86UD0 394 aa21.27■■□□□ 1
CTNS-203ENST00000399306 ZNF408Q9H9D4 720 aa21.27■■□□□ 1
CTNS-203ENST00000399306 ATP8A2Q9NTI2 1148 aa21.27■■□□□ 1
CTNS-203ENST00000399306 FLT1P17948 1338 aa21.27■□□□□ 0.99
CTNS-203ENST00000399306 RASSF10A6NK89 507 aa21.26■□□□□ 0.99
CTNS-203ENST00000399306 GNAT2P19087 354 aa21.26■□□□□ 0.99
CTNS-203ENST00000399306 TCP10Q12799 353 aa21.26■□□□□ 0.99
CTNS-203ENST00000399306 PRAMEF18Q5VWM3 479 aa21.26■□□□□ 0.99
CTNS-203ENST00000399306 TGFBRAP1Q8WUH2 860 aa21.26■□□□□ 0.99
CTNS-203ENST00000399306 OSBP2Q969R2 916 aa21.26■□□□□ 0.99
CTNS-203ENST00000399306 PUS7LQ9H0K6 701 aaKnown RBP21.26■□□□□ 0.99
CTNS-203ENST00000399306 HELLSQ9NRZ9 838 aa21.26■□□□□ 0.99
CTNS-203ENST00000399306 MKRN1Q9UHC7 482 aaKnown RBP21.26■□□□□ 0.99
CTNS-203ENST00000399306 MYH1P12882 1939 aa21.25■□□□□ 0.99
CTNS-203ENST00000399306 TBC1D12O60347 775 aa21.25■□□□□ 0.99
CTNS-203ENST00000399306 MBD4O95243 580 aa21.25■□□□□ 0.99
CTNS-203ENST00000399306 USP5P45974 858 aa21.25■□□□□ 0.99
CTNS-203ENST00000399306 PICALMQ13492 652 aa21.25■□□□□ 0.99
CTNS-203ENST00000399306 GIMAP6Q6P9H5 292 aa21.25■□□□□ 0.99
CTNS-203ENST00000399306 LCORLQ8N3X6 602 aa21.25■□□□□ 0.99
CTNS-203ENST00000399306 RILPL2Q969X0 211 aa21.25■□□□□ 0.99
CTNS-203ENST00000399306 STRBPQ96SI9 672 aaKnown RBP21.25■□□□□ 0.99
CTNS-203ENST00000399306 GSPT1P15170 499 aaKnown RBP21.24■□□□□ 0.99
CTNS-203ENST00000399306 LDLRAD1Q5T700 205 aa21.24■□□□□ 0.99
CTNS-203ENST00000399306 SH3BP5LQ7L8J4 393 aa21.24■□□□□ 0.99
CTNS-203ENST00000399306 METTL16Q86W50 562 aaKnown RBP21.24■□□□□ 0.99
CTNS-203ENST00000399306 ZFPM1Q8IX07 1006 aa21.24■□□□□ 0.99
CTNS-203ENST00000399306 CSRNP1Q96S65 589 aa21.24■□□□□ 0.99
CTNS-203ENST00000399306 PI4KBQ9UBF8 816 aa21.24■□□□□ 0.99
CTNS-203ENST00000399306 SDSP20132 328 aa21.23■□□□□ 0.99
CTNS-203ENST00000399306 IREB2P48200 963 aaKnown RBP21.23■□□□□ 0.99
CTNS-203ENST00000399306 MAPKAPK5Q8IW41 473 aa21.23■□□□□ 0.99
CTNS-203ENST00000399306 ZSCAN29Q8IWY8 852 aaPredicted RBP21.23■□□□□ 0.99
CTNS-203ENST00000399306 ARMT1Q9H993 441 aa21.23■□□□□ 0.99
CTNS-203ENST00000399306 ABT1Q9ULW3 272 aaKnown RBP21.23■□□□□ 0.99
CTNS-203ENST00000399306 DDX60LQ5H9U9 1706 aaKnown RBP21.23■□□□□ 0.99
CTNS-203ENST00000399306 NAV1Q8NEY1 1877 aa21.22■□□□□ 0.99
CTNS-203ENST00000399306 DDTLA6NHG4 134 aaPredicted RBP21.22■□□□□ 0.99
CTNS-203ENST00000399306 GPAA1O43292 621 aa21.22■□□□□ 0.99
CTNS-203ENST00000399306 USP2O75604 605 aaPredicted RBP21.22■□□□□ 0.99
CTNS-203ENST00000399306 CHGBP05060 677 aa21.22■□□□□ 0.99
CTNS-203ENST00000399306 HUNKP57058 714 aa21.22■□□□□ 0.99
CTNS-203ENST00000399306 SLFNL1Q499Z3 407 aa21.22■□□□□ 0.99
CTNS-203ENST00000399306 BMP2KLQ5H9B9 411 aa21.22■□□□□ 0.99
CTNS-203ENST00000399306 FOXP4Q8IVH2 680 aaPredicted RBP21.22■□□□□ 0.99
CTNS-203ENST00000399306 CDAN1Q8IWY9 1227 aa21.22■□□□□ 0.99
CTNS-203ENST00000399306 DDRGK1Q96HY6 314 aa21.22■□□□□ 0.99
CTNS-203ENST00000399306 ZNF341Q9BYN7 854 aa21.22■□□□□ 0.99
CTNS-203ENST00000399306 HERC5Q9UII4 1024 aaKnown RBP21.22■□□□□ 0.99
CTNS-203ENST00000399306 ZNF112Q9UJU3 913 aa21.22■□□□□ 0.99
CTNS-203ENST00000399306 HLA-DOAP06340 250 aa21.21■□□□□ 0.99
CTNS-203ENST00000399306 MFAP1P55081 439 aaKnown RBP21.21■□□□□ 0.99
CTNS-203ENST00000399306 DEFB115Q30KQ5 88 aa21.21■□□□□ 0.99
CTNS-203ENST00000399306 MCMDC2Q4G0Z9 681 aa21.21■□□□□ 0.99
CTNS-203ENST00000399306 TTC6Q86TZ1 520 aa21.21■□□□□ 0.99
CTNS-203ENST00000399306 KLRG1Q96E93 195 aa21.21■□□□□ 0.99
CTNS-203ENST00000399306 EHD4Q9H223 541 aa21.21■□□□□ 0.99
CTNS-203ENST00000399306 DCP1AQ9NPI6 582 aaPredicted RBP21.21■□□□□ 0.99
CTNS-203ENST00000399306 ANGEL1Q9UNK9 670 aaKnown RBP21.21■□□□□ 0.99
CTNS-203ENST00000399306 TTLL12Q14166 644 aaPredicted RBP21.2■□□□□ 0.98
CTNS-203ENST00000399306 ANKRD13AQ8IZ07 590 aa21.2■□□□□ 0.98
CTNS-203ENST00000399306 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.2■□□□□ 0.98
CTNS-203ENST00000399306 SLC4A4Q9Y6R1 1079 aa21.2■□□□□ 0.98
CTNS-203ENST00000399306 PATL2C9JE40 543 aaKnown RBP21.19■□□□□ 0.98
CTNS-203ENST00000399306 M0R2C6 588 aa21.19■□□□□ 0.98
CTNS-203ENST00000399306 ECE1P42892 770 aa21.19■□□□□ 0.98
CTNS-203ENST00000399306 RGMBQ6NW40 437 aa21.19■□□□□ 0.98
CTNS-203ENST00000399306 CCDC102AQ96A19 550 aa21.19■□□□□ 0.98
CTNS-203ENST00000399306 DIAPH3Q9NSV4 1193 aa21.19■□□□□ 0.98
CTNS-203ENST00000399306 SIPA1L1O43166 1804 aa21.18■□□□□ 0.98
CTNS-203ENST00000399306 MAP3K9P80192 1104 aa21.18■□□□□ 0.98
CTNS-203ENST00000399306 SBK1Q52WX2 424 aa21.18■□□□□ 0.98
CTNS-203ENST00000399306 AMOTL1Q8IY63 956 aa21.18■□□□□ 0.98
CTNS-203ENST00000399306 SDR42E1Q8WUS8 393 aa21.18■□□□□ 0.98
CTNS-203ENST00000399306 GSG1L2A8MUP6 293 aa21.17■□□□□ 0.98
CTNS-203ENST00000399306 UBE2Q2LH0YL09 131 aa21.17■□□□□ 0.98
CTNS-203ENST00000399306 NMIQ13287 307 aaPredicted RBP21.17■□□□□ 0.98
CTNS-203ENST00000399306 NOL9Q5SY16 702 aaKnown RBP21.17■□□□□ 0.98
CTNS-203ENST00000399306 SEC62Q99442 399 aaKnown RBP21.17■□□□□ 0.98
CTNS-203ENST00000399306 NACAP1Q9BZK3 213 aa21.17■□□□□ 0.98
CTNS-203ENST00000399306 GINM1Q9NU53 330 aa21.17■□□□□ 0.98
CTNS-203ENST00000399306 MCM9Q9NXL9 1143 aa21.17■□□□□ 0.98
CTNS-203ENST00000399306 ARPP21Q9UBL0 812 aaPredicted RBP21.17■□□□□ 0.98
CTNS-203ENST00000399306 PALD1Q9ULE6 856 aa21.17■□□□□ 0.98
CTNS-203ENST00000399306 RAD50Q92878 1312 aa21.17■□□□□ 0.98
CTNS-203ENST00000399306 BAZ2AQ9UIF9 1905 aaKnown RBP21.17■□□□□ 0.98
CTNS-203ENST00000399306 OTOFQ9HC10 1997 aa21.17■□□□□ 0.98
CTNS-203ENST00000399306 A0A0D9SFI3 127 aa21.16■□□□□ 0.98
CTNS-203ENST00000399306 PRKAB2O43741 272 aa21.16■□□□□ 0.98
CTNS-203ENST00000399306 ALX1Q15699 326 aa21.16■□□□□ 0.98
CTNS-203ENST00000399306 MOB2Q70IA6 237 aa21.16■□□□□ 0.98
CTNS-203ENST00000399306 DNAJC5GQ8N7S2 189 aa21.16■□□□□ 0.98
CTNS-203ENST00000399306 RUFY2Q8WXA3 655 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms