RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 MAP3K9P80192 1104 aa30.92■■■□□ 2.54
U2AF1-203ENST00000398137 TBC1D9Q6ZT07 1266 aa30.92■■■□□ 2.54
U2AF1-203ENST00000398137 CTU1Q7Z7A3 348 aaKnown RBP30.92■■■□□ 2.54
U2AF1-203ENST00000398137 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.92■■■□□ 2.54
U2AF1-203ENST00000398137 MS4A4AQ96JQ5 239 aa30.92■■■□□ 2.54
U2AF1-203ENST00000398137 DNAJC2Q99543 621 aaKnown RBP30.92■■■□□ 2.54
U2AF1-203ENST00000398137 BOLA2Q9H3K6 86 aa30.92■■■□□ 2.54
U2AF1-203ENST00000398137 ABCF2Q9UG63 623 aa30.92■■■□□ 2.54
U2AF1-203ENST00000398137 ZGPATQ8N5A5 531 aaKnown RBP30.91■■■□□ 2.54
U2AF1-203ENST00000398137 FAM198AQ9UFP1 575 aa30.91■■■□□ 2.54
U2AF1-203ENST00000398137 GAKO14976 1311 aa30.91■■■□□ 2.54
U2AF1-203ENST00000398137 TTC41PQ6P2S7 1318 aa30.91■■■□□ 2.54
U2AF1-203ENST00000398137 CYP2E1P05181 493 aaPredicted RBP30.9■■■□□ 2.54
U2AF1-203ENST00000398137 ZNF384Q8TF68 577 aa30.9■■■□□ 2.54
U2AF1-203ENST00000398137 FAM151AQ8WW52 585 aa30.89■■■□□ 2.54
U2AF1-203ENST00000398137 PIH1D3Q9NQM4 214 aaKnown RBP30.89■■■□□ 2.54
U2AF1-203ENST00000398137 SNCAIPQ9Y6H5 919 aa30.89■■■□□ 2.54
U2AF1-203ENST00000398137 ALDH1A1P00352 501 aa30.88■■■□□ 2.53
U2AF1-203ENST00000398137 TCP10Q12799 353 aa30.88■■■□□ 2.53
U2AF1-203ENST00000398137 ZFPM1Q8IX07 1006 aa30.88■■■□□ 2.53
U2AF1-203ENST00000398137 HAUS7Q99871 368 aa30.88■■■□□ 2.53
U2AF1-203ENST00000398137 RFX7Q2KHR2 1363 aa30.88■■■□□ 2.53
U2AF1-203ENST00000398137 PDE4AP27815 886 aa30.87■■■□□ 2.53
U2AF1-203ENST00000398137 PDE1AP54750 535 aa30.87■■■□□ 2.53
U2AF1-203ENST00000398137 SPTY2D1Q68D10 685 aaPredicted RBP30.87■■■□□ 2.53
U2AF1-203ENST00000398137 PI4K2BQ8TCG2 481 aa30.87■■■□□ 2.53
U2AF1-203ENST00000398137 ZKSCAN4Q969J2 545 aaPredicted RBP30.87■■■□□ 2.53
U2AF1-203ENST00000398137 EDC3Q96F86 508 aaKnown RBP30.87■■■□□ 2.53
U2AF1-203ENST00000398137 ANTXR1Q9H6X2 564 aa30.87■■■□□ 2.53
U2AF1-203ENST00000398137 USP40Q9NVE5 1235 aa30.87■■■□□ 2.53
U2AF1-203ENST00000398137 GOLIM4O00461 696 aa30.86■■■□□ 2.53
U2AF1-203ENST00000398137 ERC2O15083 957 aa30.86■■■□□ 2.53
U2AF1-203ENST00000398137 ERICH6Q7L0X2 663 aa30.86■■■□□ 2.53
U2AF1-203ENST00000398137 MIGA2Q7L4E1 593 aa30.86■■■□□ 2.53
U2AF1-203ENST00000398137 WRNIP1Q96S55 665 aa30.86■■■□□ 2.53
U2AF1-203ENST00000398137 LRP2BPQ9P2M1 347 aa30.86■■■□□ 2.53
U2AF1-203ENST00000398137 STAP2Q9UGK3 403 aa30.86■■■□□ 2.53
U2AF1-203ENST00000398137 AK9Q5TCS8 1911 aa30.85■■■□□ 2.53
U2AF1-203ENST00000398137 SPDYE5A6NIY4 337 aa30.85■■■□□ 2.53
U2AF1-203ENST00000398137 RGS19P49795 217 aa30.85■■■□□ 2.53
U2AF1-203ENST00000398137 DZIP1Q86YF9 867 aaKnown RBP30.85■■■□□ 2.53
U2AF1-203ENST00000398137 BRI3BPQ8WY22 251 aa30.85■■■□□ 2.53
U2AF1-203ENST00000398137 FAM163AQ96GL9 167 aaPredicted RBP30.85■■■□□ 2.53
U2AF1-203ENST00000398137 PAG1Q9NWQ8 432 aa30.85■■■□□ 2.53
U2AF1-203ENST00000398137 RAI14Q9P0K7 980 aa30.85■■■□□ 2.53
U2AF1-203ENST00000398137 CSADQ9Y600 493 aa30.85■■■□□ 2.53
U2AF1-203ENST00000398137 FKTNO75072 461 aa30.84■■■□□ 2.53
U2AF1-203ENST00000398137 GLRX3O76003 335 aaKnown RBP30.84■■■□□ 2.53
U2AF1-203ENST00000398137 PLEKHM2Q8IWE5 1019 aa30.84■■■□□ 2.53
U2AF1-203ENST00000398137 OTUD5Q96G74 571 aa30.84■■■□□ 2.53
U2AF1-203ENST00000398137 MAST2Q6P0Q8 1798 aa30.84■■■□□ 2.53
U2AF1-203ENST00000398137 ATRNL1Q5VV63 1379 aa30.83■■■□□ 2.53
U2AF1-203ENST00000398137 CRHR2Q13324 411 aa30.83■■■□□ 2.53
U2AF1-203ENST00000398137 MYO5AQ9Y4I1 1855 aaKnown RBP30.82■■■□□ 2.53
U2AF1-203ENST00000398137 DOCK2Q92608 1830 aa30.82■■■□□ 2.52
U2AF1-203ENST00000398137 IDH1O75874 414 aaKnown RBP30.82■■■□□ 2.52
U2AF1-203ENST00000398137 INPP5BP32019 993 aa30.82■■■□□ 2.52
U2AF1-203ENST00000398137 MECOMQ03112 1051 aa30.82■■■□□ 2.52
U2AF1-203ENST00000398137 TTF1Q15361 905 aaPredicted RBP30.82■■■□□ 2.52
U2AF1-203ENST00000398137 IDI2Q9BXS1 227 aa30.82■■■□□ 2.52
U2AF1-203ENST00000398137 ZNF112Q9UJU3 913 aa30.82■■■□□ 2.52
U2AF1-203ENST00000398137 MAP4K4O95819 1239 aaPredicted RBP30.81■■■□□ 2.52
U2AF1-203ENST00000398137 DCAF15Q66K64 600 aa30.81■■■□□ 2.52
U2AF1-203ENST00000398137 SH3BP5LQ7L8J4 393 aa30.81■■■□□ 2.52
U2AF1-203ENST00000398137 HOOK2Q96ED9 719 aa30.81■■■□□ 2.52
U2AF1-203ENST00000398137 ZNF341Q9BYN7 854 aa30.81■■■□□ 2.52
U2AF1-203ENST00000398137 MROH7-TTC4A0A0A0MT08 1334 aa30.8■■■□□ 2.52
U2AF1-203ENST00000398137 WDHD1O75717 1129 aaPredicted RBP30.8■■■□□ 2.52
U2AF1-203ENST00000398137 RGS3P49796 1198 aa30.8■■■□□ 2.52
U2AF1-203ENST00000398137 CAP1Q01518 475 aa30.8■■■□□ 2.52
U2AF1-203ENST00000398137 DDX4Q9NQI0 724 aaKnown RBP30.8■■■□□ 2.52
U2AF1-203ENST00000398137 HTTP42858 3142 aa30.79■■■□□ 2.52
U2AF1-203ENST00000398137 CCL15-CCL14A0A0B4J2E2 113 aa30.79■■■□□ 2.52
U2AF1-203ENST00000398137 BTDP43251 543 aa30.79■■■□□ 2.52
U2AF1-203ENST00000398137 RHBDL3P58872 404 aa30.79■■■□□ 2.52
U2AF1-203ENST00000398137 CCL15Q16663 113 aa30.79■■■□□ 2.52
U2AF1-203ENST00000398137 SKAP1Q86WV1 359 aa30.79■■■□□ 2.52
U2AF1-203ENST00000398137 ERO1BQ86YB8 467 aa30.79■■■□□ 2.52
U2AF1-203ENST00000398137 NSUN4Q96CB9 384 aaKnown RBP30.79■■■□□ 2.52
U2AF1-203ENST00000398137 HPS5Q9UPZ3 1129 aa30.79■■■□□ 2.52
U2AF1-203ENST00000398137 GPR75-ASB3A0A0A6YYF3 556 aa30.78■■■□□ 2.52
U2AF1-203ENST00000398137 IRF6O14896 467 aa30.78■■■□□ 2.52
U2AF1-203ENST00000398137 SLURP2P0DP57 97 aa30.78■■■□□ 2.52
U2AF1-203ENST00000398137 GTF2A2P52657 109 aa30.78■■■□□ 2.52
U2AF1-203ENST00000398137 FAM43AQ8N2R8 423 aa30.78■■■□□ 2.52
U2AF1-203ENST00000398137 ENTPD3O75355 529 aa30.77■■■□□ 2.52
U2AF1-203ENST00000398137 PKN2Q16513 984 aaKnown RBP30.77■■■□□ 2.52
U2AF1-203ENST00000398137 OSBPL3Q9H4L5 887 aa30.77■■■□□ 2.52
U2AF1-203ENST00000398137 GSTO1P78417 241 aa30.76■■■□□ 2.51
U2AF1-203ENST00000398137 MAP3K12Q12852 859 aa30.76■■■□□ 2.51
U2AF1-203ENST00000398137 OTUD7BQ6GQQ9 843 aa30.76■■■□□ 2.51
U2AF1-203ENST00000398137 NAA16Q6N069 864 aaPredicted RBP30.76■■■□□ 2.51
U2AF1-203ENST00000398137 DDTLA6NHG4 134 aaPredicted RBP30.75■■■□□ 2.51
U2AF1-203ENST00000398137 PPIL2Q13356 520 aa30.75■■■□□ 2.51
U2AF1-203ENST00000398137 SLF2Q8IX21 1173 aa30.75■■■□□ 2.51
U2AF1-203ENST00000398137 PHF20L1A8MW92 1017 aa30.74■■■□□ 2.51
U2AF1-203ENST00000398137 MAGEB6Q8N7X4 407 aa30.74■■■□□ 2.51
U2AF1-203ENST00000398137 MAP3K10Q02779 954 aa30.73■■■□□ 2.51
U2AF1-203ENST00000398137 NOL9Q5SY16 702 aaKnown RBP30.73■■■□□ 2.51
U2AF1-203ENST00000398137 FBXO46Q6PJ61 603 aaPredicted RBP30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms