RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 KCNQ4P56696 695 aa19.51■□□□□ 0.71
NUP50-202ENST00000396096 PPARAQ07869 468 aa19.51■□□□□ 0.71
NUP50-202ENST00000396096 SETDB2Q96T68 719 aa19.51■□□□□ 0.71
NUP50-202ENST00000396096 DNAJC25Q9H1X3 360 aa19.51■□□□□ 0.71
NUP50-202ENST00000396096 RAI14Q9P0K7 980 aa19.51■□□□□ 0.71
NUP50-202ENST00000396096 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.51■□□□□ 0.71
NUP50-202ENST00000396096 FMNL1O95466 1100 aaPredicted RBP19.5■□□□□ 0.71
NUP50-202ENST00000396096 SF3A1Q15459 793 aaKnown RBP19.5■□□□□ 0.71
NUP50-202ENST00000396096 BICDL1Q6ZP65 573 aa19.5■□□□□ 0.71
NUP50-202ENST00000396096 AIFM3Q96NN9 605 aa19.5■□□□□ 0.71
NUP50-202ENST00000396096 NLRP3Q96P20 1036 aa19.5■□□□□ 0.71
NUP50-202ENST00000396096 IQSEC3Q9UPP2 1182 aaPredicted RBP19.5■□□□□ 0.71
NUP50-202ENST00000396096 MAST2Q6P0Q8 1798 aa19.5■□□□□ 0.71
NUP50-202ENST00000396096 GOLGA6L6A8MZA4 724 aa19.5■□□□□ 0.71
NUP50-202ENST00000396096 U2AF2P26368 475 aaKnown RBP eCLIP19.5■□□□□ 0.71
NUP50-202ENST00000396096 RPS8P62241 208 aaKnown RBP19.5■□□□□ 0.71
NUP50-202ENST00000396096 PLCB2Q00722 1185 aa19.5■□□□□ 0.71
NUP50-202ENST00000396096 SLC39A14Q15043 492 aa19.5■□□□□ 0.71
NUP50-202ENST00000396096 IQCB1Q15051 598 aa19.5■□□□□ 0.71
NUP50-202ENST00000396096 VPS37DQ86XT2 251 aa19.5■□□□□ 0.71
NUP50-202ENST00000396096 WASF1Q92558 559 aa19.5■□□□□ 0.71
NUP50-202ENST00000396096 PHKBQ93100 1093 aa19.5■□□□□ 0.71
NUP50-202ENST00000396096 ABCF2Q9UG63 623 aa19.5■□□□□ 0.71
NUP50-202ENST00000396096 SSRP1Q08945 709 aaKnown RBP19.49■□□□□ 0.71
NUP50-202ENST00000396096 WTAPQ15007 396 aa19.49■□□□□ 0.71
NUP50-202ENST00000396096 AXDND1Q5T1B0 1012 aaPredicted RBP19.49■□□□□ 0.71
NUP50-202ENST00000396096 TMED8Q6PL24 325 aaPredicted RBP19.49■□□□□ 0.71
NUP50-202ENST00000396096 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.49■□□□□ 0.71
NUP50-202ENST00000396096 PLA2G4DQ86XP0 818 aa19.49■□□□□ 0.71
NUP50-202ENST00000396096 PIBF1Q8WXW3 757 aa19.49■□□□□ 0.71
NUP50-202ENST00000396096 BRIP1Q9BX63 1249 aa19.49■□□□□ 0.71
NUP50-202ENST00000396096 ANKRD2Q9GZV1 360 aa19.49■□□□□ 0.71
NUP50-202ENST00000396096 SRP68Q9UHB9 627 aaKnown RBP19.49■□□□□ 0.71
NUP50-202ENST00000396096 DUOX1Q9NRD9 1551 aa19.49■□□□□ 0.71
NUP50-202ENST00000396096 WTIPA6NIX2 430 aaPredicted RBP19.48■□□□□ 0.71
NUP50-202ENST00000396096 ZPR1O75312 459 aa19.48■□□□□ 0.71
NUP50-202ENST00000396096 NBPF5PQ86XG9 351 aaPredicted RBP19.48■□□□□ 0.71
NUP50-202ENST00000396096 MYL10Q9BUA6 226 aa19.48■□□□□ 0.71
NUP50-202ENST00000396096 DLEC1Q9Y238 1755 aa19.48■□□□□ 0.71
NUP50-202ENST00000396096 SBF2Q86WG5 1849 aa19.48■□□□□ 0.71
NUP50-202ENST00000396096 KIAA1551Q9HCM1 1747 aa19.48■□□□□ 0.71
NUP50-202ENST00000396096 ERICH2A1L162 156 aa19.48■□□□□ 0.71
NUP50-202ENST00000396096 GNPATO15228 680 aa19.48■□□□□ 0.71
NUP50-202ENST00000396096 TPM2P07951 284 aa19.48■□□□□ 0.71
NUP50-202ENST00000396096 CMA1P23946 247 aa19.48■□□□□ 0.71
NUP50-202ENST00000396096 NDUFA8P51970 172 aa19.48■□□□□ 0.71
NUP50-202ENST00000396096 TRIM29Q14134 588 aa19.48■□□□□ 0.71
NUP50-202ENST00000396096 TPTE2Q6XPS3 522 aa19.48■□□□□ 0.71
NUP50-202ENST00000396096 CCDC144CPQ8IYA2 1237 aa19.48■□□□□ 0.71
NUP50-202ENST00000396096 ANO10Q9NW15 660 aa19.48■□□□□ 0.71
NUP50-202ENST00000396096 SPATA31A6Q5VVP1 1343 aa19.47■□□□□ 0.71
NUP50-202ENST00000396096 UBAP1LF5GYI3 381 aa19.47■□□□□ 0.71
NUP50-202ENST00000396096 PPP6R2O75170 966 aa19.47■□□□□ 0.71
NUP50-202ENST00000396096 PCP11498 1178 aaKnown RBP19.47■□□□□ 0.71
NUP50-202ENST00000396096 ZNF75DP51815 510 aa19.47■□□□□ 0.71
NUP50-202ENST00000396096 RRP12Q5JTH9 1297 aaKnown RBP19.47■□□□□ 0.71
NUP50-202ENST00000396096 SARM1Q6SZW1 724 aa19.47■□□□□ 0.71
NUP50-202ENST00000396096 TTC12Q9H892 705 aaPredicted RBP19.47■□□□□ 0.71
NUP50-202ENST00000396096 ANO8Q9HCE9 1232 aaPredicted RBP19.47■□□□□ 0.71
NUP50-202ENST00000396096 CCNL1Q9UK58 526 aaPredicted RBP19.47■□□□□ 0.71
NUP50-202ENST00000396096 RTCBQ9Y3I0 505 aaKnown RBP19.47■□□□□ 0.71
NUP50-202ENST00000396096 CCDC196A0A1B0GTZ2 297 aa19.46■□□□□ 0.71
NUP50-202ENST00000396096 A0A1B0GVL5 298 aa19.46■□□□□ 0.71
NUP50-202ENST00000396096 FGRP09769 529 aa19.46■□□□□ 0.71
NUP50-202ENST00000396096 PPP2R5BQ15173 497 aa19.46■□□□□ 0.71
NUP50-202ENST00000396096 SEC23AQ15436 765 aa19.46■□□□□ 0.71
NUP50-202ENST00000396096 RTN1Q16799 776 aa19.46■□□□□ 0.71
NUP50-202ENST00000396096 C11orf57Q6ZUT1 292 aaPredicted RBP19.46■□□□□ 0.71
NUP50-202ENST00000396096 ZNF384Q8TF68 577 aa19.46■□□□□ 0.71
NUP50-202ENST00000396096 SDR42E1Q8WUS8 393 aa19.46■□□□□ 0.71
NUP50-202ENST00000396096 ESR2Q92731 530 aa19.46■□□□□ 0.71
NUP50-202ENST00000396096 ZNF830Q96NB3 372 aaPredicted RBP19.46■□□□□ 0.71
NUP50-202ENST00000396096 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.46■□□□□ 0.71
NUP50-202ENST00000396096 SLC26A6Q9BXS9 759 aa19.46■□□□□ 0.71
NUP50-202ENST00000396096 USP21Q9UK80 565 aa19.46■□□□□ 0.71
NUP50-202ENST00000396096 BAZ2AQ9UIF9 1905 aaKnown RBP19.46■□□□□ 0.71
NUP50-202ENST00000396096 LAMB1P07942 1786 aa19.46■□□□□ 0.7
NUP50-202ENST00000396096 CDC25BP30305 580 aa19.45■□□□□ 0.7
NUP50-202ENST00000396096 PTPAQ15257 358 aa19.45■□□□□ 0.7
NUP50-202ENST00000396096 SMIM5Q71RC9 77 aa19.45■□□□□ 0.7
NUP50-202ENST00000396096 NBPF11Q86T75 865 aa19.45■□□□□ 0.7
NUP50-202ENST00000396096 JMYQ8N9B5 988 aa19.45■□□□□ 0.7
NUP50-202ENST00000396096 MAP3K14Q99558 947 aa19.45■□□□□ 0.7
NUP50-202ENST00000396096 TOMM22Q9NS69 142 aa19.45■□□□□ 0.7
NUP50-202ENST00000396096 TNRC6CQ9HCJ0 1690 aaKnown RBP19.45■□□□□ 0.7
NUP50-202ENST00000396096 CCDC88AQ3V6T2 1871 aa19.45■□□□□ 0.7
NUP50-202ENST00000396096 FAM237AA0A1B0GTK4 181 aa19.45■□□□□ 0.7
NUP50-202ENST00000396096 TM4SF1P30408 202 aa19.45■□□□□ 0.7
NUP50-202ENST00000396096 NSUN4Q96CB9 384 aaKnown RBP19.45■□□□□ 0.7
NUP50-202ENST00000396096 SPTLC3Q9NUV7 552 aa19.45■□□□□ 0.7
NUP50-202ENST00000396096 IGSF3O75054 1194 aa19.44■□□□□ 0.7
NUP50-202ENST00000396096 TRIM22Q8IYM9 498 aa19.44■□□□□ 0.7
NUP50-202ENST00000396096 ZNF654Q8IZM8 581 aa19.44■□□□□ 0.7
NUP50-202ENST00000396096 MPNDQ8N594 471 aa19.44■□□□□ 0.7
NUP50-202ENST00000396096 ARHGEF1Q92888 912 aaKnown RBP19.44■□□□□ 0.7
NUP50-202ENST00000396096 TIGD1Q96MW7 591 aa19.44■□□□□ 0.7
NUP50-202ENST00000396096 ZKSCAN3Q9BRR0 538 aa19.44■□□□□ 0.7
NUP50-202ENST00000396096 UBAC1Q9BSL1 405 aa19.44■□□□□ 0.7
NUP50-202ENST00000396096 KCNF1Q9H3M0 494 aa19.44■□□□□ 0.7
NUP50-202ENST00000396096 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms