RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 TEX11Q8IYF3 940 aa21.33■■□□□ 1.01
UPK3A-202ENST00000396082 ZKSCAN4Q969J2 545 aaPredicted RBP21.33■■□□□ 1.01
UPK3A-202ENST00000396082 OTUD5Q96G74 571 aa21.33■■□□□ 1.01
UPK3A-202ENST00000396082 LRRCC1Q9C099 1032 aa21.33■■□□□ 1.01
UPK3A-202ENST00000396082 DDX4Q9NQI0 724 aaKnown RBP21.33■■□□□ 1.01
UPK3A-202ENST00000396082 AATFQ9NY61 560 aaKnown RBP eCLIP21.33■■□□□ 1.01
UPK3A-202ENST00000396082 NDUFB9Q9Y6M9 179 aa21.33■■□□□ 1.01
UPK3A-202ENST00000396082 LAMB1P07942 1786 aa21.33■■□□□ 1
UPK3A-202ENST00000396082 ALDH1A1P00352 501 aa21.32■■□□□ 1
UPK3A-202ENST00000396082 PLCG2P16885 1265 aa21.32■■□□□ 1
UPK3A-202ENST00000396082 CNKSR2Q8WXI2 1034 aa21.32■■□□□ 1
UPK3A-202ENST00000396082 SPDYE5A6NIY4 337 aa21.31■■□□□ 1
UPK3A-202ENST00000396082 TBC1D8O95759 1140 aa21.31■■□□□ 1
UPK3A-202ENST00000396082 MAP3K12Q12852 859 aa21.31■■□□□ 1
UPK3A-202ENST00000396082 OTUD7BQ6GQQ9 843 aa21.31■■□□□ 1
UPK3A-202ENST00000396082 IFNL1Q8IU54 200 aa21.31■■□□□ 1
UPK3A-202ENST00000396082 DNAJC2Q99543 621 aaKnown RBP21.31■■□□□ 1
UPK3A-202ENST00000396082 SNCAIPQ9Y6H5 919 aa21.31■■□□□ 1
UPK3A-202ENST00000396082 CYP7A1P22680 504 aa21.3■■□□□ 1
UPK3A-202ENST00000396082 INPP5BP32019 993 aa21.3■■□□□ 1
UPK3A-202ENST00000396082 TTF1Q15361 905 aaPredicted RBP21.3■■□□□ 1
UPK3A-202ENST00000396082 ERO1BQ86YB8 467 aa21.3■■□□□ 1
UPK3A-202ENST00000396082 MAGEB6Q8N7X4 407 aa21.3■■□□□ 1
UPK3A-202ENST00000396082 SH3RF3Q8TEJ3 882 aaPredicted RBP21.3■■□□□ 1
UPK3A-202ENST00000396082 ANTXR1Q9H6X2 564 aa21.3■■□□□ 1
UPK3A-202ENST00000396082 DDTLA6NHG4 134 aaPredicted RBP21.29■■□□□ 1
UPK3A-202ENST00000396082 NPM3O75607 178 aaKnown RBP21.29■■□□□ 1
UPK3A-202ENST00000396082 CAPN15O75808 1086 aa21.29■■□□□ 1
UPK3A-202ENST00000396082 GTF2A2P52657 109 aa21.29■■□□□ 1
UPK3A-202ENST00000396082 SH3BP5LQ7L8J4 393 aa21.29■■□□□ 1
UPK3A-202ENST00000396082 ADGRA1Q86SQ6 560 aa21.29■■□□□ 1
UPK3A-202ENST00000396082 CRBNQ96SW2 442 aa21.29■■□□□ 1
UPK3A-202ENST00000396082 IGF2BP3O00425 579 aaKnown RBP eCLIP21.28■■□□□ 1
UPK3A-202ENST00000396082 SMARCA5O60264 1052 aaPredicted RBP21.28■■□□□ 1
UPK3A-202ENST00000396082 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.28■■□□□ 1
UPK3A-202ENST00000396082 OSBPL5Q9H0X9 879 aaPredicted RBP21.28■■□□□ 1
UPK3A-202ENST00000396082 ATRNL1Q5VV63 1379 aa21.27■■□□□ 1
UPK3A-202ENST00000396082 CCL15-CCL14A0A0B4J2E2 113 aa21.27■■□□□ 1
UPK3A-202ENST00000396082 PPP4CP60510 307 aa21.27■■□□□ 1
UPK3A-202ENST00000396082 CCL15Q16663 113 aa21.27■■□□□ 1
UPK3A-202ENST00000396082 ZNF112Q9UJU3 913 aa21.27■■□□□ 1
UPK3A-202ENST00000396082 GOLIM4O00461 696 aa21.26■□□□□ 0.99
UPK3A-202ENST00000396082 PPIL2Q13356 520 aa21.26■□□□□ 0.99
UPK3A-202ENST00000396082 DGKZQ13574 1117 aa21.26■□□□□ 0.99
UPK3A-202ENST00000396082 MIGA1Q8NAN2 632 aa21.26■□□□□ 0.99
UPK3A-202ENST00000396082 TGFBRAP1Q8WUH2 860 aa21.26■□□□□ 0.99
UPK3A-202ENST00000396082 DCTPP1Q9H773 170 aa21.26■□□□□ 0.99
UPK3A-202ENST00000396082 PCDHB15Q9Y5E8 787 aa21.26■□□□□ 0.99
UPK3A-202ENST00000396082 CDK5RAP2Q96SN8 1893 aa21.26■□□□□ 0.99
UPK3A-202ENST00000396082 COL2A1P02458 1487 aaPredicted RBP21.26■□□□□ 0.99
UPK3A-202ENST00000396082 TESPA1A2RU30 521 aaPredicted RBP21.25■□□□□ 0.99
UPK3A-202ENST00000396082 GPR25O00155 361 aa21.25■□□□□ 0.99
UPK3A-202ENST00000396082 IRF6O14896 467 aa21.25■□□□□ 0.99
UPK3A-202ENST00000396082 DYNLL1P63167 89 aaKnown RBP21.25■□□□□ 0.99
UPK3A-202ENST00000396082 PPATQ06203 517 aa21.25■□□□□ 0.99
UPK3A-202ENST00000396082 SNAPC2Q13487 334 aa21.25■□□□□ 0.99
UPK3A-202ENST00000396082 NOL9Q5SY16 702 aaKnown RBP21.25■□□□□ 0.99
UPK3A-202ENST00000396082 TMED8Q6PL24 325 aaPredicted RBP21.25■□□□□ 0.99
UPK3A-202ENST00000396082 CERS3Q8IU89 383 aa21.25■□□□□ 0.99
UPK3A-202ENST00000396082 MAPKAPK5Q8IW41 473 aa21.25■□□□□ 0.99
UPK3A-202ENST00000396082 MS4A4AQ96JQ5 239 aa21.25■□□□□ 0.99
UPK3A-202ENST00000396082 BOLA2Q9H3K6 86 aa21.25■□□□□ 0.99
UPK3A-202ENST00000396082 PICK1Q9NRD5 415 aa21.25■□□□□ 0.99
UPK3A-202ENST00000396082 FOCADQ5VW36 1801 aa21.25■□□□□ 0.99
UPK3A-202ENST00000396082 CETPP11597 493 aa21.24■□□□□ 0.99
UPK3A-202ENST00000396082 ATP5JP18859 108 aa21.24■□□□□ 0.99
UPK3A-202ENST00000396082 SCYL3Q8IZE3 742 aa21.24■□□□□ 0.99
UPK3A-202ENST00000396082 ZNF296Q8WUU4 475 aaPredicted RBP21.24■□□□□ 0.99
UPK3A-202ENST00000396082 BRI3BPQ8WY22 251 aa21.24■□□□□ 0.99
UPK3A-202ENST00000396082 CFHR5Q9BXR6 569 aa21.24■□□□□ 0.99
UPK3A-202ENST00000396082 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.24■□□□□ 0.99
UPK3A-202ENST00000396082 FLT1P17948 1338 aa21.24■□□□□ 0.99
UPK3A-202ENST00000396082 FAM196BA6NMK8 535 aa21.23■□□□□ 0.99
UPK3A-202ENST00000396082 SLC9C2Q5TAH2 1124 aa21.23■□□□□ 0.99
UPK3A-202ENST00000396082 GPATCH3Q96I76 525 aa21.23■□□□□ 0.99
UPK3A-202ENST00000396082 PTPN18Q99952 460 aa21.23■□□□□ 0.99
UPK3A-202ENST00000396082 MCOLN1Q9GZU1 580 aa21.23■□□□□ 0.99
UPK3A-202ENST00000396082 DHX36Q9H2U1 1008 aaKnown RBP21.23■□□□□ 0.99
UPK3A-202ENST00000396082 PAG1Q9NWQ8 432 aa21.23■□□□□ 0.99
UPK3A-202ENST00000396082 DOCK1Q14185 1865 aa21.23■□□□□ 0.99
UPK3A-202ENST00000396082 PHF20L1A8MW92 1017 aa21.22■□□□□ 0.99
UPK3A-202ENST00000396082 TBC1D12O60347 775 aa21.22■□□□□ 0.99
UPK3A-202ENST00000396082 SLURP2P0DP57 97 aa21.22■□□□□ 0.99
UPK3A-202ENST00000396082 USP5P45974 858 aa21.22■□□□□ 0.99
UPK3A-202ENST00000396082 NOM1Q5C9Z4 860 aaKnown RBP21.22■□□□□ 0.99
UPK3A-202ENST00000396082 EDC3Q96F86 508 aaKnown RBP21.22■□□□□ 0.99
UPK3A-202ENST00000396082 ABHD8Q96I13 439 aa21.22■□□□□ 0.99
UPK3A-202ENST00000396082 TRIM34Q9BYJ4 488 aa21.22■□□□□ 0.99
UPK3A-202ENST00000396082 R3HDMLQ9H3Y0 253 aa21.22■□□□□ 0.99
UPK3A-202ENST00000396082 CTNND1O60716 968 aaKnown RBP21.21■□□□□ 0.99
UPK3A-202ENST00000396082 FKTNO75072 461 aa21.21■□□□□ 0.99
UPK3A-202ENST00000396082 PDE6AP16499 860 aa21.21■□□□□ 0.99
UPK3A-202ENST00000396082 MAP3K10Q02779 954 aa21.21■□□□□ 0.99
UPK3A-202ENST00000396082 CRHR2Q13324 411 aa21.21■□□□□ 0.99
UPK3A-202ENST00000396082 TAF1CQ15572 869 aaPredicted RBP21.21■□□□□ 0.99
UPK3A-202ENST00000396082 CTU1Q7Z7A3 348 aaKnown RBP21.21■□□□□ 0.99
UPK3A-202ENST00000396082 HAUS7Q99871 368 aa21.21■□□□□ 0.99
UPK3A-202ENST00000396082 ECHDC1Q9NTX5 307 aa21.21■□□□□ 0.99
UPK3A-202ENST00000396082 PI4KBQ9UBF8 816 aa21.21■□□□□ 0.99
UPK3A-202ENST00000396082 ZBTB47Q9UFB7 747 aaPredicted RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms