RNA–Protein interactions for RNA: ENST00000394752.7

SFMBT1-201, Transcript of Scm like with four mbt domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFMBT1, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-201ENST00000394752 RPGRQ92834 1020 aaKnown RBP16.75■□□□□ 0.27
SFMBT1-201ENST00000394752 BMP2KQ9NSY1 1161 aaPredicted RBP16.75■□□□□ 0.27
SFMBT1-201ENST00000394752 CHD2O14647 1828 aaKnown RBP16.75■□□□□ 0.27
SFMBT1-201ENST00000394752 CHGBP05060 677 aa16.75■□□□□ 0.27
SFMBT1-201ENST00000394752 TPTE2Q6XPS3 522 aa16.75■□□□□ 0.27
SFMBT1-201ENST00000394752 STAMQ92783 540 aa16.75■□□□□ 0.27
SFMBT1-201ENST00000394752 CYP19A1P11511 503 aaPredicted RBP16.75■□□□□ 0.27
SFMBT1-201ENST00000394752 KIF5BP33176 963 aa16.75■□□□□ 0.27
SFMBT1-201ENST00000394752 MYL5Q02045 173 aa16.75■□□□□ 0.27
SFMBT1-201ENST00000394752 ZNF219Q9P2Y4 722 aaPredicted RBP16.75■□□□□ 0.27
SFMBT1-201ENST00000394752 KCNH3Q9ULD8 1083 aa16.75■□□□□ 0.27
SFMBT1-201ENST00000394752 POLR2DO15514 142 aaKnown RBP16.74■□□□□ 0.27
SFMBT1-201ENST00000394752 PDE6AP16499 860 aa16.74■□□□□ 0.27
SFMBT1-201ENST00000394752 KLHL34Q8N239 644 aa16.74■□□□□ 0.27
SFMBT1-201ENST00000394752 MYRIPQ8NFW9 859 aa16.74■□□□□ 0.27
SFMBT1-201ENST00000394752 MCM9Q9NXL9 1143 aa16.74■□□□□ 0.27
SFMBT1-201ENST00000394752 SLU7O95391 586 aaKnown RBP16.74■□□□□ 0.27
SFMBT1-201ENST00000394752 PDIA3P30101 505 aaKnown RBP16.74■□□□□ 0.27
SFMBT1-201ENST00000394752 ZNF174Q15697 407 aa16.74■□□□□ 0.27
SFMBT1-201ENST00000394752 KANK3Q6NY19 840 aa16.74■□□□□ 0.27
SFMBT1-201ENST00000394752 LZTFL1Q9NQ48 299 aa16.74■□□□□ 0.27
SFMBT1-201ENST00000394752 RGPD1P0DJD0 1748 aa16.74■□□□□ 0.27
SFMBT1-201ENST00000394752 RFX7Q2KHR2 1363 aa16.74■□□□□ 0.27
SFMBT1-201ENST00000394752 MCM7P33993 719 aa16.74■□□□□ 0.27
SFMBT1-201ENST00000394752 MTIF2P46199 727 aaKnown RBP16.74■□□□□ 0.27
SFMBT1-201ENST00000394752 CCDC96Q2M329 555 aa16.73■□□□□ 0.27
SFMBT1-201ENST00000394752 MAPK8IP1Q9UQF2 711 aa16.73■□□□□ 0.27
SFMBT1-201ENST00000394752 VWA3AA6NCI4 1184 aa16.73■□□□□ 0.27
SFMBT1-201ENST00000394752 MAPK8IP2Q13387 824 aaPredicted RBP16.73■□□□□ 0.27
SFMBT1-201ENST00000394752 ATL3Q6DD88 541 aa16.73■□□□□ 0.27
SFMBT1-201ENST00000394752 ZNF274Q96GC6 653 aaPredicted RBP16.73■□□□□ 0.27
SFMBT1-201ENST00000394752 V9GY48 417 aaPredicted RBP16.73■□□□□ 0.27
SFMBT1-201ENST00000394752 U2AF2P26368 475 aaKnown RBP eCLIP16.73■□□□□ 0.27
SFMBT1-201ENST00000394752 TOB2Q14106 344 aaPredicted RBP16.73■□□□□ 0.27
SFMBT1-201ENST00000394752 JAKMIP3Q5VZ66 844 aa16.73■□□□□ 0.27
SFMBT1-201ENST00000394752 HEATR3Q7Z4Q2 680 aa16.73■□□□□ 0.27
SFMBT1-201ENST00000394752 TCP11L1Q9NUJ3 509 aa16.73■□□□□ 0.27
SFMBT1-201ENST00000394752 MRVI1Q9Y6F6 885 aa16.73■□□□□ 0.27
SFMBT1-201ENST00000394752 F8W031 263 aaPredicted RBP16.73■□□□□ 0.27
SFMBT1-201ENST00000394752 TRIM28Q13263 835 aaKnown RBP16.73■□□□□ 0.27
SFMBT1-201ENST00000394752 TRIM47Q96LD4 638 aa16.73■□□□□ 0.27
SFMBT1-201ENST00000394752 GJB4Q9NTQ9 266 aa16.73■□□□□ 0.27
SFMBT1-201ENST00000394752 PCDHA7Q9UN72 937 aa16.73■□□□□ 0.27
SFMBT1-201ENST00000394752 ELP1O95163 1332 aa16.72■□□□□ 0.27
SFMBT1-201ENST00000394752 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.72■□□□□ 0.27
SFMBT1-201ENST00000394752 CCNL1Q9UK58 526 aaPredicted RBP16.72■□□□□ 0.27
SFMBT1-201ENST00000394752 FANCCQ00597 558 aa16.72■□□□□ 0.27
SFMBT1-201ENST00000394752 TMEM87BQ96K49 555 aa16.72■□□□□ 0.27
SFMBT1-201ENST00000394752 LEKR1Q6ZMV7 388 aa16.72■□□□□ 0.27
SFMBT1-201ENST00000394752 TRMT1LQ7Z2T5 733 aaKnown RBP16.72■□□□□ 0.27
SFMBT1-201ENST00000394752 TRMT44Q8IYL2 757 aaKnown RBP16.72■□□□□ 0.27
SFMBT1-201ENST00000394752 XPO4Q9C0E2 1151 aaKnown RBP16.72■□□□□ 0.27
SFMBT1-201ENST00000394752 PUS7LQ9H0K6 701 aaKnown RBP16.72■□□□□ 0.27
SFMBT1-201ENST00000394752 ZNF287Q9HBT7 754 aa16.72■□□□□ 0.27
SFMBT1-201ENST00000394752 NSUN7Q8NE18 718 aaKnown RBP16.71■□□□□ 0.27
SFMBT1-201ENST00000394752 CENPHQ9H3R5 247 aa16.71■□□□□ 0.27
SFMBT1-201ENST00000394752 SEC31BQ9NQW1 1179 aa16.71■□□□□ 0.27
SFMBT1-201ENST00000394752 YEATS4O95619 227 aa16.71■□□□□ 0.27
SFMBT1-201ENST00000394752 TSPY3P0CV98 308 aa16.71■□□□□ 0.27
SFMBT1-201ENST00000394752 TSPY8P0CW00 308 aa16.71■□□□□ 0.27
SFMBT1-201ENST00000394752 BCAMP50895 628 aa16.71■□□□□ 0.27
SFMBT1-201ENST00000394752 UBA5Q9GZZ9 404 aa16.71■□□□□ 0.27
SFMBT1-201ENST00000394752 STAT6P42226 847 aa16.71■□□□□ 0.26
SFMBT1-201ENST00000394752 PTPN21Q16825 1174 aa16.71■□□□□ 0.26
SFMBT1-201ENST00000394752 CCDC178Q5BJE1 867 aa16.71■□□□□ 0.26
SFMBT1-201ENST00000394752 CLIC4Q9Y696 253 aa16.71■□□□□ 0.26
SFMBT1-201ENST00000394752 CDHR2Q9BYE9 1310 aa16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 MED23Q9ULK4 1368 aa16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 NDUFA8P51970 172 aa16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 UBE3CQ15386 1083 aa16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 TDRD12Q587J7 1177 aaKnown RBP16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 CT47A1Q5JQC4 288 aaPredicted RBP16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 SUSD4Q5VX71 490 aa16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 SPTY2D1Q68D10 685 aaPredicted RBP16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 CACNA2D4Q7Z3S7 1137 aa16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 CRACR2BQ8N4Y2 399 aaPredicted RBP16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 BAG3O95817 575 aa16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 GTF2F1P35269 517 aaKnown RBP eCLIP16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 SPA17Q15506 151 aa16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 CLIC6Q96NY7 704 aa16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 BCL2L12Q9HB09 334 aa16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 KIAA1468Q9P260 1216 aa16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 DENND2AQ9ULE3 1009 aa16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 THRAP3Q9Y2W1 955 aaKnown RBP16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 EIF3JO75822 258 aaKnown RBP16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 CCT6AP40227 531 aaKnown RBP16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 PNOCQ13519 176 aa16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 ZNF827Q17R98 1081 aa16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 ZNF609O15014 1411 aa16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 COL5A2P05997 1499 aaPredicted RBP16.7■□□□□ 0.26
SFMBT1-201ENST00000394752 SNAP23O00161 211 aa16.69■□□□□ 0.26
SFMBT1-201ENST00000394752 ADALQ6DHV7 355 aa16.69■□□□□ 0.26
SFMBT1-201ENST00000394752 CCDC94Q9BW85 323 aaPredicted RBP16.69■□□□□ 0.26
SFMBT1-201ENST00000394752 PFKFB1P16118 471 aa16.69■□□□□ 0.26
SFMBT1-201ENST00000394752 TRIM21P19474 475 aaKnown RBP16.69■□□□□ 0.26
SFMBT1-201ENST00000394752 MCAMP43121 646 aa16.69■□□□□ 0.26
SFMBT1-201ENST00000394752 FKBP15Q5T1M5 1219 aa16.69■□□□□ 0.26
SFMBT1-201ENST00000394752 ANKRD2Q9GZV1 360 aa16.69■□□□□ 0.26
SFMBT1-201ENST00000394752 TFCP2L1Q9NZI6 479 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms