RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 TBC1D5Q92609 795 aa22.14■■□□□ 1.13
SHANK1-203ENST00000391813 ZC3H12CQ9C0D7 883 aaKnown RBP22.14■■□□□ 1.13
SHANK1-203ENST00000391813 ANKRD2Q9GZV1 360 aa22.14■■□□□ 1.13
SHANK1-203ENST00000391813 KCNH3Q9ULD8 1083 aa22.14■■□□□ 1.13
SHANK1-203ENST00000391813 CTNNA2P26232 953 aa22.13■■□□□ 1.13
SHANK1-203ENST00000391813 TTLL12Q14166 644 aaPredicted RBP22.13■■□□□ 1.13
SHANK1-203ENST00000391813 LMNTD2Q8IXW0 634 aa22.13■■□□□ 1.13
SHANK1-203ENST00000391813 XPO4Q9C0E2 1151 aaKnown RBP22.13■■□□□ 1.13
SHANK1-203ENST00000391813 IKBKGQ9Y6K9 419 aa22.13■■□□□ 1.13
SHANK1-203ENST00000391813 WHAMMP3Q1A5X7 153 aa22.13■■□□□ 1.13
SHANK1-203ENST00000391813 HOMER2Q9NSB8 354 aa22.13■■□□□ 1.13
SHANK1-203ENST00000391813 ZNF202O95125 648 aa22.13■■□□□ 1.13
SHANK1-203ENST00000391813 CALML3P27482 149 aa22.13■■□□□ 1.13
SHANK1-203ENST00000391813 PYCARDQ9ULZ3 195 aa22.12■■□□□ 1.13
SHANK1-203ENST00000391813 IRS4O14654 1257 aaPredicted RBP22.12■■□□□ 1.13
SHANK1-203ENST00000391813 GNAQP50148 359 aa22.12■■□□□ 1.13
SHANK1-203ENST00000391813 ZNF804AQ7Z570 1209 aa22.12■■□□□ 1.13
SHANK1-203ENST00000391813 TRIM7Q9C029 511 aa22.12■■□□□ 1.13
SHANK1-203ENST00000391813 KAT14Q9H8E8 782 aa22.12■■□□□ 1.13
SHANK1-203ENST00000391813 CUTAO60888 179 aa22.12■■□□□ 1.13
SHANK1-203ENST00000391813 TNIP1Q15025 636 aa22.12■■□□□ 1.13
SHANK1-203ENST00000391813 CCDC26Q8TAB7 109 aa22.12■■□□□ 1.13
SHANK1-203ENST00000391813 FLAD1Q8NFF5 587 aa22.12■■□□□ 1.13
SHANK1-203ENST00000391813 RNF113AO15541 343 aaKnown RBP22.11■■□□□ 1.13
SHANK1-203ENST00000391813 ATP11AP98196 1134 aa22.11■■□□□ 1.13
SHANK1-203ENST00000391813 CCDC51Q96ER9 411 aa22.11■■□□□ 1.13
SHANK1-203ENST00000391813 CDC37L1Q7L3B6 337 aa22.11■■□□□ 1.13
SHANK1-203ENST00000391813 CABP5Q9NP86 173 aa22.11■■□□□ 1.13
SHANK1-203ENST00000391813 JDP2Q8WYK2 163 aa22.11■■□□□ 1.13
SHANK1-203ENST00000391813 NFE2L3Q9Y4A8 694 aa22.11■■□□□ 1.13
SHANK1-203ENST00000391813 TLDC2A0PJX2 215 aa22.11■■□□□ 1.13
SHANK1-203ENST00000391813 TRMT2AQ8IZ69 625 aaKnown RBP22.11■■□□□ 1.13
SHANK1-203ENST00000391813 PKP1Q13835 747 aa22.1■■□□□ 1.13
SHANK1-203ENST00000391813 CNBD1Q8NA66 436 aa22.1■■□□□ 1.13
SHANK1-203ENST00000391813 RABGGTAQ92696 567 aa22.1■■□□□ 1.13
SHANK1-203ENST00000391813 SMC6Q96SB8 1091 aa22.1■■□□□ 1.13
SHANK1-203ENST00000391813 CCDC87Q9NVE4 849 aa22.1■■□□□ 1.13
SHANK1-203ENST00000391813 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.1■■□□□ 1.13
SHANK1-203ENST00000391813 TSPY2A6NKD2 308 aa22.1■■□□□ 1.13
SHANK1-203ENST00000391813 CDC25BP30305 580 aa22.1■■□□□ 1.13
SHANK1-203ENST00000391813 ZBTB16Q05516 673 aa22.1■■□□□ 1.13
SHANK1-203ENST00000391813 PLBD2Q8NHP8 589 aa22.1■■□□□ 1.13
SHANK1-203ENST00000391813 FAM71BQ8TC56 605 aa22.1■■□□□ 1.13
SHANK1-203ENST00000391813 PA2G4Q9UQ80 394 aaKnown RBP22.1■■□□□ 1.13
SHANK1-203ENST00000391813 CALM1P0DP23 149 aa22.1■■□□□ 1.13
SHANK1-203ENST00000391813 CALM2P0DP24 149 aa22.1■■□□□ 1.13
SHANK1-203ENST00000391813 CALM3P0DP25 149 aa22.1■■□□□ 1.13
SHANK1-203ENST00000391813 ALDH3A1P30838 453 aa22.1■■□□□ 1.13
SHANK1-203ENST00000391813 CRNKL1Q9BZJ0 848 aaKnown RBP22.1■■□□□ 1.13
SHANK1-203ENST00000391813 PPFIA4O75335 1185 aa22.1■■□□□ 1.13
SHANK1-203ENST00000391813 TDRD7Q8NHU6 1098 aaKnown RBP22.1■■□□□ 1.13
SHANK1-203ENST00000391813 HELLSQ9NRZ9 838 aa22.1■■□□□ 1.13
SHANK1-203ENST00000391813 A2ML1A8K2U0 1454 aa22.1■■□□□ 1.13
SHANK1-203ENST00000391813 PAK2Q13177 524 aa22.09■■□□□ 1.13
SHANK1-203ENST00000391813 NUP58Q9BVL2 599 aa22.09■■□□□ 1.13
SHANK1-203ENST00000391813 EFCC1Q9HA90 598 aa22.09■■□□□ 1.13
SHANK1-203ENST00000391813 BUB1BO60566 1050 aaPredicted RBP22.09■■□□□ 1.13
SHANK1-203ENST00000391813 TRIM35Q9UPQ4 493 aa22.09■■□□□ 1.13
SHANK1-203ENST00000391813 SH3TC1Q8TE82 1336 aa22.09■■□□□ 1.13
SHANK1-203ENST00000391813 ATP2A1O14983 1001 aa22.09■■□□□ 1.13
SHANK1-203ENST00000391813 GSPT1P15170 499 aaKnown RBP22.09■■□□□ 1.13
SHANK1-203ENST00000391813 HPDP32754 393 aaPredicted RBP22.08■■□□□ 1.13
SHANK1-203ENST00000391813 FCHSD1Q86WN1 690 aa22.08■■□□□ 1.13
SHANK1-203ENST00000391813 ZNF335Q9H4Z2 1342 aaPredicted RBP22.08■■□□□ 1.13
SHANK1-203ENST00000391813 KRT13P13646 458 aa22.08■■□□□ 1.13
SHANK1-203ENST00000391813 ZBTB9Q96C00 473 aa22.08■■□□□ 1.13
SHANK1-203ENST00000391813 PAIP2Q9BPZ3 127 aaKnown RBP22.08■■□□□ 1.13
SHANK1-203ENST00000391813 MTMR6Q9Y217 621 aa22.08■■□□□ 1.13
SHANK1-203ENST00000391813 ATP5DP30049 168 aa22.08■■□□□ 1.13
SHANK1-203ENST00000391813 IQCGQ9H095 443 aaKnown RBP22.08■■□□□ 1.13
SHANK1-203ENST00000391813 KIAA1468Q9P260 1216 aa22.08■■□□□ 1.13
SHANK1-203ENST00000391813 ROBO2Q9HCK4 1378 aa22.08■■□□□ 1.12
SHANK1-203ENST00000391813 UBLCP1Q8WVY7 318 aaPredicted RBP22.08■■□□□ 1.12
SHANK1-203ENST00000391813 JAKMIP2Q96AA8 810 aa22.08■■□□□ 1.12
SHANK1-203ENST00000391813 RGS12O14924 1447 aa22.08■■□□□ 1.12
SHANK1-203ENST00000391813 TBC1D8BQ0IIM8 1120 aa22.07■■□□□ 1.12
SHANK1-203ENST00000391813 GRIPAP1Q4V328 841 aa22.07■■□□□ 1.12
SHANK1-203ENST00000391813 IFIT1BQ5T764 474 aaKnown RBP22.07■■□□□ 1.12
SHANK1-203ENST00000391813 RBM17Q96I25 401 aaKnown RBP22.07■■□□□ 1.12
SHANK1-203ENST00000391813 KRT9P35527 623 aa22.07■■□□□ 1.12
SHANK1-203ENST00000391813 KRT2P35908 639 aa22.07■■□□□ 1.12
SHANK1-203ENST00000391813 CARD10Q9BWT7 1032 aa22.07■■□□□ 1.12
SHANK1-203ENST00000391813 PRDM15P57071 1507 aaPredicted RBP22.07■■□□□ 1.12
SHANK1-203ENST00000391813 APBA3O96018 575 aa22.07■■□□□ 1.12
SHANK1-203ENST00000391813 CCT6AP40227 531 aaKnown RBP22.07■■□□□ 1.12
SHANK1-203ENST00000391813 ADALQ6DHV7 355 aa22.07■■□□□ 1.12
SHANK1-203ENST00000391813 INTS8Q75QN2 995 aaKnown RBP22.07■■□□□ 1.12
SHANK1-203ENST00000391813 NAP1L3Q99457 506 aaPredicted RBP22.07■■□□□ 1.12
SHANK1-203ENST00000391813 DAAM2Q86T65 1068 aa22.07■■□□□ 1.12
SHANK1-203ENST00000391813 SHROOM2Q13796 1616 aa22.07■■□□□ 1.12
SHANK1-203ENST00000391813 MTX1Q13505 466 aa22.06■■□□□ 1.12
SHANK1-203ENST00000391813 SND1Q7KZF4 910 aaKnown RBP eCLIP22.06■■□□□ 1.12
SHANK1-203ENST00000391813 JARID2Q92833 1246 aaPredicted RBP22.06■■□□□ 1.12
SHANK1-203ENST00000391813 SECISBP2LQ93073 1101 aaKnown RBP22.06■■□□□ 1.12
SHANK1-203ENST00000391813 ADCY10Q96PN6 1610 aa22.06■■□□□ 1.12
SHANK1-203ENST00000391813 VIMP08670 466 aaKnown RBP22.06■■□□□ 1.12
SHANK1-203ENST00000391813 ACTN2P35609 894 aa22.06■■□□□ 1.12
SHANK1-203ENST00000391813 TSKSQ9UJT2 592 aa22.06■■□□□ 1.12
SHANK1-203ENST00000391813 RTL9Q8NET4 1388 aa22.06■■□□□ 1.12
SHANK1-203ENST00000391813 CHL1O00533 1208 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms