RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 ARID4AP29374 1257 aaPredicted RBP11.31□□□□□ -0.6
HMGN1-202ENST00000380747 PRDX5P30044 214 aa11.31□□□□□ -0.6
HMGN1-202ENST00000380747 HDLBPQ00341 1268 aaKnown RBP11.31□□□□□ -0.6
HMGN1-202ENST00000380747 PRAMEF18Q5VWM3 479 aa11.31□□□□□ -0.6
HMGN1-202ENST00000380747 PI16Q6UXB8 463 aa11.31□□□□□ -0.6
HMGN1-202ENST00000380747 CLASRPQ8N2M8 674 aaKnown RBP11.31□□□□□ -0.6
HMGN1-202ENST00000380747 ZGPATQ8N5A5 531 aaKnown RBP11.31□□□□□ -0.6
HMGN1-202ENST00000380747 SPATA5Q8NB90 893 aa11.31□□□□□ -0.6
HMGN1-202ENST00000380747 TDRD3Q9H7E2 651 aaKnown RBP11.31□□□□□ -0.6
HMGN1-202ENST00000380747 SNRKQ9NRH2 765 aa11.31□□□□□ -0.6
HMGN1-202ENST00000380747 PCDHB15Q9Y5E8 787 aa11.31□□□□□ -0.6
HMGN1-202ENST00000380747 AOX1Q06278 1338 aa11.31□□□□□ -0.6
HMGN1-202ENST00000380747 PDS5AQ29RF7 1337 aaKnown RBP11.31□□□□□ -0.6
HMGN1-202ENST00000380747 IFIT2P09913 472 aaKnown RBP11.3□□□□□ -0.6
HMGN1-202ENST00000380747 MCAMP43121 646 aa11.3□□□□□ -0.6
HMGN1-202ENST00000380747 DIXDC1Q155Q3 683 aa11.3□□□□□ -0.6
HMGN1-202ENST00000380747 NOM1Q5C9Z4 860 aaKnown RBP11.3□□□□□ -0.6
HMGN1-202ENST00000380747 SPTY2D1Q68D10 685 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-202ENST00000380747 TBC1D9Q6ZT07 1266 aa11.3□□□□□ -0.6
HMGN1-202ENST00000380747 DZIP1Q86YF9 867 aaKnown RBP11.3□□□□□ -0.6
HMGN1-202ENST00000380747 ZNF70Q9UC06 446 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-202ENST00000380747 CENPFP49454 3210 aa11.3□□□□□ -0.6
HMGN1-202ENST00000380747 AKAP11Q9UKA4 1901 aa11.29□□□□□ -0.6
HMGN1-202ENST00000380747 HHIPL2Q6UWX4 724 aa11.29□□□□□ -0.6
HMGN1-202ENST00000380747 ERICH6Q7L0X2 663 aa11.29□□□□□ -0.6
HMGN1-202ENST00000380747 RASAL3Q86YV0 1011 aa11.29□□□□□ -0.6
HMGN1-202ENST00000380747 EXOC6Q8TAG9 804 aa11.29□□□□□ -0.6
HMGN1-202ENST00000380747 ZDHHC15Q96MV8 337 aa11.29□□□□□ -0.6
HMGN1-202ENST00000380747 MRIQ9BWK5 157 aa11.29□□□□□ -0.6
HMGN1-202ENST00000380747 LRRCC1Q9C099 1032 aa11.29□□□□□ -0.6
HMGN1-202ENST00000380747 DCTPP1Q9H773 170 aa11.29□□□□□ -0.6
HMGN1-202ENST00000380747 GPHNQ9NQX3 736 aaPredicted RBP11.29□□□□□ -0.6
HMGN1-202ENST00000380747 HPS5Q9UPZ3 1129 aa11.29□□□□□ -0.6
HMGN1-202ENST00000380747 BOLA1Q9Y3E2 137 aa11.29□□□□□ -0.6
HMGN1-202ENST00000380747 TCP10L2B9ZVM9 353 aa11.28□□□□□ -0.6
HMGN1-202ENST00000380747 SMARCA5O60264 1052 aaPredicted RBP11.28□□□□□ -0.6
HMGN1-202ENST00000380747 ZAP70P43403 619 aa11.28□□□□□ -0.6
HMGN1-202ENST00000380747 TTLL12Q14166 644 aaPredicted RBP11.28□□□□□ -0.6
HMGN1-202ENST00000380747 ZNF512BQ96KM6 892 aaPredicted RBP11.28□□□□□ -0.6
HMGN1-202ENST00000380747 DEFB129Q9H1M3 183 aa11.28□□□□□ -0.6
HMGN1-202ENST00000380747 TMOD2Q9NZR1 351 aa11.28□□□□□ -0.6
HMGN1-202ENST00000380747 RAI14Q9P0K7 980 aa11.28□□□□□ -0.6
HMGN1-202ENST00000380747 LRP2BPQ9P2M1 347 aa11.28□□□□□ -0.6
HMGN1-202ENST00000380747 DAGLAQ9Y4D2 1042 aa11.28□□□□□ -0.6
HMGN1-202ENST00000380747 MYH13Q9UKX3 1938 aa11.28□□□□□ -0.6
HMGN1-202ENST00000380747 BRCA2P51587 3418 aa11.28□□□□□ -0.6
HMGN1-202ENST00000380747 POLR2AP24928 1970 aaKnown RBP11.27□□□□□ -0.61
HMGN1-202ENST00000380747 PAPPA2Q9BXP8 1791 aa11.27□□□□□ -0.61
HMGN1-202ENST00000380747 NF2P35240 595 aa11.27□□□□□ -0.61
HMGN1-202ENST00000380747 CACNB3P54284 484 aa11.27□□□□□ -0.61
HMGN1-202ENST00000380747 IRX6P78412 446 aaPredicted RBP11.27□□□□□ -0.61
HMGN1-202ENST00000380747 TNFAIP1Q13829 316 aa11.27□□□□□ -0.61
HMGN1-202ENST00000380747 PRKG1Q13976 671 aa11.27□□□□□ -0.61
HMGN1-202ENST00000380747 RASA3Q14644 834 aa11.27□□□□□ -0.61
HMGN1-202ENST00000380747 APOBEC3HQ6NTF7 200 aaKnown RBP11.27□□□□□ -0.61
HMGN1-202ENST00000380747 SLF2Q8IX21 1173 aa11.27□□□□□ -0.61
HMGN1-202ENST00000380747 PPP2R3BQ9Y5P8 575 aa11.27□□□□□ -0.61
HMGN1-202ENST00000380747 SEC24BO95487 1268 aa11.26□□□□□ -0.61
HMGN1-202ENST00000380747 CYP2E1P05181 493 aaPredicted RBP11.26□□□□□ -0.61
HMGN1-202ENST00000380747 TNNI2P48788 182 aa11.26□□□□□ -0.61
HMGN1-202ENST00000380747 GSTO1P78417 241 aa11.26□□□□□ -0.61
HMGN1-202ENST00000380747 MECOMQ03112 1051 aa11.26□□□□□ -0.61
HMGN1-202ENST00000380747 PPP1R15BQ5SWA1 713 aa11.26□□□□□ -0.61
HMGN1-202ENST00000380747 GCC1Q96CN9 775 aa11.26□□□□□ -0.61
HMGN1-202ENST00000380747 TMEM121BQ9BXQ6 578 aaPredicted RBP11.26□□□□□ -0.61
HMGN1-202ENST00000380747 CFHR5Q9BXR6 569 aa11.26□□□□□ -0.61
HMGN1-202ENST00000380747 PIH1D3Q9NQM4 214 aaKnown RBP11.26□□□□□ -0.61
HMGN1-202ENST00000380747 USP40Q9NVE5 1235 aa11.26□□□□□ -0.61
HMGN1-202ENST00000380747 COLQQ9Y215 455 aaPredicted RBP11.26□□□□□ -0.61
HMGN1-202ENST00000380747 NDUFB9Q9Y6M9 179 aa11.26□□□□□ -0.61
HMGN1-202ENST00000380747 UBE2Q2LH0YL09 131 aa11.25□□□□□ -0.61
HMGN1-202ENST00000380747 LDHCP07864 332 aa11.25□□□□□ -0.61
HMGN1-202ENST00000380747 TM4SF4P48230 202 aa11.25□□□□□ -0.61
HMGN1-202ENST00000380747 AAMPQ13685 434 aa11.25□□□□□ -0.61
HMGN1-202ENST00000380747 CDC42EP5Q6NZY7 148 aa11.25□□□□□ -0.61
HMGN1-202ENST00000380747 MOB2Q70IA6 237 aa11.25□□□□□ -0.61
HMGN1-202ENST00000380747 ZNF296Q8WUU4 475 aaPredicted RBP11.25□□□□□ -0.61
HMGN1-202ENST00000380747 NSUN4Q96CB9 384 aaKnown RBP11.25□□□□□ -0.61
HMGN1-202ENST00000380747 DNAJC2Q99543 621 aaKnown RBP11.25□□□□□ -0.61
HMGN1-202ENST00000380747 MROH7-TTC4A0A0A0MT08 1334 aa11.25□□□□□ -0.61
HMGN1-202ENST00000380747 GAKO14976 1311 aa11.25□□□□□ -0.61
HMGN1-202ENST00000380747 IDH1O75874 414 aaKnown RBP11.24□□□□□ -0.61
HMGN1-202ENST00000380747 BTDP43251 543 aa11.24□□□□□ -0.61
HMGN1-202ENST00000380747 HDAC1Q13547 482 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-202ENST00000380747 CAMK2BQ13554 666 aa11.24□□□□□ -0.61
HMGN1-202ENST00000380747 SUPT20HL1Q3ZLR7 823 aa11.24□□□□□ -0.61
HMGN1-202ENST00000380747 NBPF12Q5TAG4 269 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-202ENST00000380747 NAA16Q6N069 864 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-202ENST00000380747 FBXO46Q6PJ61 603 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-202ENST00000380747 ARMC9Q7Z3E5 817 aa11.24□□□□□ -0.61
HMGN1-202ENST00000380747 TMC2Q8TDI7 906 aa11.24□□□□□ -0.61
HMGN1-202ENST00000380747 ZNF384Q8TF68 577 aa11.24□□□□□ -0.61
HMGN1-202ENST00000380747 SLC39A7Q92504 469 aa11.24□□□□□ -0.61
HMGN1-202ENST00000380747 TMEM39BQ9GZU3 492 aa11.24□□□□□ -0.61
HMGN1-202ENST00000380747 ANTXR1Q9H6X2 564 aa11.24□□□□□ -0.61
HMGN1-202ENST00000380747 GOLIM4O00461 696 aa11.23□□□□□ -0.61
HMGN1-202ENST00000380747 PPP1R12BO60237 982 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-202ENST00000380747 TCP10Q12799 353 aa11.23□□□□□ -0.61
HMGN1-202ENST00000380747 ANKRD45Q5TZF3 282 aa11.23□□□□□ -0.61
HMGN1-202ENST00000380747 CDAN1Q8IWY9 1227 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms