RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 KRT5P13647 590 aa10.97□□□□□ -0.65
SPEN-201ENST00000375759 FANCCQ00597 558 aa10.96□□□□□ -0.65
SPEN-201ENST00000375759 TNFAIP3P21580 790 aa10.96□□□□□ -0.65
SPEN-201ENST00000375759 RAB17Q9H0T7 212 aa10.96□□□□□ -0.65
SPEN-201ENST00000375759 VCX3AQ9NNX9 186 aa10.96□□□□□ -0.65
SPEN-201ENST00000375759 CHMLP26374 656 aa10.96□□□□□ -0.65
SPEN-201ENST00000375759 TNNI2P48788 182 aa10.96□□□□□ -0.65
SPEN-201ENST00000375759 ZNF804AQ7Z570 1209 aa10.96□□□□□ -0.65
SPEN-201ENST00000375759 CLSTN2Q9H4D0 955 aa10.96□□□□□ -0.65
SPEN-201ENST00000375759 EXOC5O00471 708 aa10.96□□□□□ -0.65
SPEN-201ENST00000375759 BRD3Q15059 726 aa10.96□□□□□ -0.65
SPEN-201ENST00000375759 PHF8Q9UPP1 1060 aa10.96□□□□□ -0.65
SPEN-201ENST00000375759 HHATQ5VTY9 493 aa10.96□□□□□ -0.65
SPEN-201ENST00000375759 PPFIA4O75335 1185 aa10.96□□□□□ -0.66
SPEN-201ENST00000375759 CEP85Q6P2H3 762 aa10.96□□□□□ -0.66
SPEN-201ENST00000375759 NBPF5PQ86XG9 351 aaPredicted RBP10.96□□□□□ -0.66
SPEN-201ENST00000375759 NUCKS1Q9H1E3 243 aaKnown RBP10.96□□□□□ -0.66
SPEN-201ENST00000375759 SMTNP53814 917 aa10.96□□□□□ -0.66
SPEN-201ENST00000375759 SATB1Q01826 763 aa10.96□□□□□ -0.66
SPEN-201ENST00000375759 ATP2A3Q93084 1043 aa10.96□□□□□ -0.66
SPEN-201ENST00000375759 GBP5Q96PP8 586 aa10.96□□□□□ -0.66
SPEN-201ENST00000375759 HELLSQ9NRZ9 838 aa10.96□□□□□ -0.66
SPEN-201ENST00000375759 FLOT1O75955 427 aa10.96□□□□□ -0.66
SPEN-201ENST00000375759 ZSCAN26Q16670 478 aa10.96□□□□□ -0.66
SPEN-201ENST00000375759 CTTNBP2Q8WZ74 1663 aa10.95□□□□□ -0.66
SPEN-201ENST00000375759 RPS6KB1P23443 525 aa10.95□□□□□ -0.66
SPEN-201ENST00000375759 SLC8A3P57103 927 aa10.95□□□□□ -0.66
SPEN-201ENST00000375759 ANO1Q5XXA6 986 aa10.95□□□□□ -0.66
SPEN-201ENST00000375759 PAK1Q13153 545 aa10.95□□□□□ -0.66
SPEN-201ENST00000375759 CUTAO60888 179 aa10.95□□□□□ -0.66
SPEN-201ENST00000375759 FAM212AQ96EL1 285 aa10.95□□□□□ -0.66
SPEN-201ENST00000375759 STMN1P16949 149 aa10.95□□□□□ -0.66
SPEN-201ENST00000375759 ZBTB9Q96C00 473 aa10.95□□□□□ -0.66
SPEN-201ENST00000375759 SETD1BQ9UPS6 1966 aaKnown RBP10.95□□□□□ -0.66
SPEN-201ENST00000375759 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.95□□□□□ -0.66
SPEN-201ENST00000375759 MAGEB6Q8N7X4 407 aa10.95□□□□□ -0.66
SPEN-201ENST00000375759 PPANQ9NQ55 473 aaKnown RBP10.95□□□□□ -0.66
SPEN-201ENST00000375759 HAUS3Q68CZ6 603 aa10.95□□□□□ -0.66
SPEN-201ENST00000375759 CHST3Q7LGC8 479 aa10.95□□□□□ -0.66
SPEN-201ENST00000375759 NOS1P29475 1434 aa10.95□□□□□ -0.66
SPEN-201ENST00000375759 POLR2DO15514 142 aaKnown RBP10.95□□□□□ -0.66
SPEN-201ENST00000375759 SLC8A1P32418 973 aa10.95□□□□□ -0.66
SPEN-201ENST00000375759 PPP2R5EQ16537 467 aa10.95□□□□□ -0.66
SPEN-201ENST00000375759 FCHSD1Q86WN1 690 aa10.95□□□□□ -0.66
SPEN-201ENST00000375759 DEXIO95424 95 aa10.95□□□□□ -0.66
SPEN-201ENST00000375759 CSGALNACT2Q8N6G5 542 aa10.95□□□□□ -0.66
SPEN-201ENST00000375759 VPS16Q9H269 839 aa10.95□□□□□ -0.66
SPEN-201ENST00000375759 LUC7L3O95232 432 aaKnown RBP10.94□□□□□ -0.66
SPEN-201ENST00000375759 XAGE3Q8WTP9 111 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 ADGRL1O94910 1474 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 FNBP1Q96RU3 617 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 MUM1Q2TAK8 710 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 ANKRD20A3Q5VUR7 823 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 PLCD3Q8N3E9 789 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 ASIC3Q9UHC3 531 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 NLRP12P59046 1061 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 RASA3Q14644 834 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 RAPGEF3O95398 923 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 CCDC84Q86UT8 332 aaPredicted RBP10.94□□□□□ -0.66
SPEN-201ENST00000375759 CBX8Q9HC52 389 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 PPFIA2O75334 1257 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 RFC4P35249 363 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 C16orf71Q8IYS4 520 aaPredicted RBP10.94□□□□□ -0.66
SPEN-201ENST00000375759 GLT8D2Q9H1C3 349 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 RNF40O75150 1001 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 AOX1Q06278 1338 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 ZNF202O95125 648 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 PARP1P09874 1014 aaKnown RBP10.94□□□□□ -0.66
SPEN-201ENST00000375759 PDE4DQ08499 809 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 PHLDB3Q6NSJ2 640 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 TMEM87BQ96K49 555 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 MCM9Q9NXL9 1143 aa10.94□□□□□ -0.66
SPEN-201ENST00000375759 PARD3Q8TEW0 1356 aa10.93□□□□□ -0.66
SPEN-201ENST00000375759 P3H4Q92791 437 aa10.93□□□□□ -0.66
SPEN-201ENST00000375759 ZBTB40Q9NUA8 1239 aa10.93□□□□□ -0.66
SPEN-201ENST00000375759 PPP1R21Q6ZMI0 780 aa10.93□□□□□ -0.66
SPEN-201ENST00000375759 HAUS2Q9NVX0 235 aa10.93□□□□□ -0.66
SPEN-201ENST00000375759 NUP160Q12769 1436 aa10.93□□□□□ -0.66
SPEN-201ENST00000375759 OGFOD1Q8N543 542 aa10.93□□□□□ -0.66
SPEN-201ENST00000375759 KIAA0586Q9BVV6 1533 aa10.93□□□□□ -0.66
SPEN-201ENST00000375759 Q9H521 79 aa10.93□□□□□ -0.66
SPEN-201ENST00000375759 MED4Q9NPJ6 270 aa10.93□□□□□ -0.66
SPEN-201ENST00000375759 MAIP1Q8WWC4 291 aa10.93□□□□□ -0.66
SPEN-201ENST00000375759 FAN1Q9Y2M0 1017 aa10.93□□□□□ -0.66
SPEN-201ENST00000375759 TXNDC9O14530 226 aa10.93□□□□□ -0.66
SPEN-201ENST00000375759 ERCC3P19447 782 aa10.93□□□□□ -0.66
SPEN-201ENST00000375759 LMBR1LQ6UX01 489 aa10.93□□□□□ -0.66
SPEN-201ENST00000375759 POLR3AO14802 1390 aaPredicted RBP10.93□□□□□ -0.66
SPEN-201ENST00000375759 BCRP11274 1271 aa10.93□□□□□ -0.66
SPEN-201ENST00000375759 LINS1Q8NG48 757 aa10.93□□□□□ -0.66
SPEN-201ENST00000375759 CCDC117Q8IWD4 279 aaPredicted RBP10.93□□□□□ -0.66
SPEN-201ENST00000375759 HVCN1Q96D96 273 aa10.93□□□□□ -0.66
SPEN-201ENST00000375759 CCDC51Q96ER9 411 aa10.93□□□□□ -0.66
SPEN-201ENST00000375759 HIP1RO75146 1068 aa10.92□□□□□ -0.66
SPEN-201ENST00000375759 RPS6KA1Q15418 735 aa10.92□□□□□ -0.66
SPEN-201ENST00000375759 RRAGDQ9NQL2 400 aaPredicted RBP10.92□□□□□ -0.66
SPEN-201ENST00000375759 ZFYVE9O95405 1425 aa10.92□□□□□ -0.66
SPEN-201ENST00000375759 CCNT1O60563 726 aaKnown RBP10.92□□□□□ -0.66
SPEN-201ENST00000375759 RNASE9P60153 205 aaKnown RBP10.92□□□□□ -0.66
SPEN-201ENST00000375759 COPS6Q7L5N1 327 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms