RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 SRGNP10124 158 aa29.23■■■□□ 2.27
CTSA-203ENST00000372459 PCP11498 1178 aaKnown RBP29.23■■■□□ 2.27
CTSA-203ENST00000372459 NPR1P16066 1061 aa29.23■■■□□ 2.27
CTSA-203ENST00000372459 PDE6BP35913 854 aa29.23■■■□□ 2.27
CTSA-203ENST00000372459 STK11IPQ8N1F8 1099 aa29.23■■■□□ 2.27
CTSA-203ENST00000372459 ESR2Q92731 530 aa29.23■■■□□ 2.27
CTSA-203ENST00000372459 SENP2Q9HC62 589 aa29.23■■■□□ 2.27
CTSA-203ENST00000372459 POLLQ9UGP5 575 aa29.23■■■□□ 2.27
CTSA-203ENST00000372459 BAZ2AQ9UIF9 1905 aaKnown RBP29.23■■■□□ 2.27
CTSA-203ENST00000372459 PPFIA3O75145 1194 aa29.22■■■□□ 2.27
CTSA-203ENST00000372459 CDKL5O76039 1030 aa29.22■■■□□ 2.27
CTSA-203ENST00000372459 CTR9Q6PD62 1173 aa29.22■■■□□ 2.27
CTSA-203ENST00000372459 CPLX2Q6PUV4 134 aaKnown RBP29.22■■■□□ 2.27
CTSA-203ENST00000372459 ORC3Q9UBD5 711 aaPredicted RBP29.22■■■□□ 2.27
CTSA-203ENST00000372459 RGS17Q9UGC6 210 aaPredicted RBP29.22■■■□□ 2.27
CTSA-203ENST00000372459 SLC12A7Q9Y666 1083 aa29.22■■■□□ 2.27
CTSA-203ENST00000372459 DUOX1Q9NRD9 1551 aa29.22■■■□□ 2.27
CTSA-203ENST00000372459 FOSBP53539 338 aa29.22■■■□□ 2.27
CTSA-203ENST00000372459 PANK2Q9BZ23 570 aa29.22■■■□□ 2.27
CTSA-203ENST00000372459 ATP6V0A2Q9Y487 856 aa29.22■■■□□ 2.27
CTSA-203ENST00000372459 WTAPQ15007 396 aa29.21■■■□□ 2.27
CTSA-203ENST00000372459 SYNE3Q6ZMZ3 975 aa29.21■■■□□ 2.27
CTSA-203ENST00000372459 MICU3Q86XE3 530 aa29.21■■■□□ 2.27
CTSA-203ENST00000372459 TMTC2Q8N394 836 aa29.21■■■□□ 2.27
CTSA-203ENST00000372459 DCP1AQ9NPI6 582 aaPredicted RBP29.21■■■□□ 2.27
CTSA-203ENST00000372459 TTC6Q86TZ1 520 aa29.21■■■□□ 2.27
CTSA-203ENST00000372459 LTBP1Q14766 1721 aa29.2■■■□□ 2.27
CTSA-203ENST00000372459 C6orf229H3BNL8 230 aa29.2■■■□□ 2.26
CTSA-203ENST00000372459 ALDH1B1P30837 517 aa29.2■■■□□ 2.26
CTSA-203ENST00000372459 GOLGA8AA7E2F4 631 aa29.19■■■□□ 2.26
CTSA-203ENST00000372459 USP17L12C9JPN9 530 aa29.19■■■□□ 2.26
CTSA-203ENST00000372459 USP17L21D6R901 530 aa29.19■■■□□ 2.26
CTSA-203ENST00000372459 POTEAQ6S8J7 498 aa29.19■■■□□ 2.26
CTSA-203ENST00000372459 SPATA32Q96LK8 384 aa29.19■■■□□ 2.26
CTSA-203ENST00000372459 UBAC1Q9BSL1 405 aa29.19■■■□□ 2.26
CTSA-203ENST00000372459 LDHCP07864 332 aa29.19■■■□□ 2.26
CTSA-203ENST00000372459 ADD1P35611 737 aaKnown RBP29.19■■■□□ 2.26
CTSA-203ENST00000372459 C8orf76Q96K31 380 aa29.19■■■□□ 2.26
CTSA-203ENST00000372459 ZKSCAN3Q9BRR0 538 aa29.19■■■□□ 2.26
CTSA-203ENST00000372459 ARPP21Q9UBL0 812 aaPredicted RBP29.19■■■□□ 2.26
CTSA-203ENST00000372459 CFAP45Q9UL16 551 aa29.19■■■□□ 2.26
CTSA-203ENST00000372459 FGRP09769 529 aa29.18■■■□□ 2.26
CTSA-203ENST00000372459 RXRAP19793 462 aa29.18■■■□□ 2.26
CTSA-203ENST00000372459 RGS22Q8NE09 1264 aa29.18■■■□□ 2.26
CTSA-203ENST00000372459 TFIP11Q9UBB9 837 aaKnown RBP29.18■■■□□ 2.26
CTSA-203ENST00000372459 CYP2D7A0A087X1C5 515 aa29.17■■■□□ 2.26
CTSA-203ENST00000372459 SYCE3A1L190 88 aa29.17■■■□□ 2.26
CTSA-203ENST00000372459 BAG3O95817 575 aa29.17■■■□□ 2.26
CTSA-203ENST00000372459 LRSAM1Q6UWE0 723 aa29.17■■■□□ 2.26
CTSA-203ENST00000372459 NID2Q14112 1375 aa29.17■■■□□ 2.26
CTSA-203ENST00000372459 CDC27P30260 824 aa29.17■■■□□ 2.26
CTSA-203ENST00000372459 SBK1Q52WX2 424 aa29.17■■■□□ 2.26
CTSA-203ENST00000372459 MSL1Q68DK7 614 aa29.17■■■□□ 2.26
CTSA-203ENST00000372459 MASTLQ96GX5 879 aa29.17■■■□□ 2.26
CTSA-203ENST00000372459 NOL10Q9BSC4 688 aaKnown RBP29.17■■■□□ 2.26
CTSA-203ENST00000372459 LAMB1P07942 1786 aa29.16■■■□□ 2.26
CTSA-203ENST00000372459 SLC3A2P08195 630 aaKnown RBP29.16■■■□□ 2.26
CTSA-203ENST00000372459 GUCY1B3Q02153 619 aa29.16■■■□□ 2.26
CTSA-203ENST00000372459 LEO1Q8WVC0 666 aaPredicted RBP29.16■■■□□ 2.26
CTSA-203ENST00000372459 RCAN1P53805 252 aa29.15■■■□□ 2.26
CTSA-203ENST00000372459 GRIK5Q16478 980 aa29.15■■■□□ 2.26
CTSA-203ENST00000372459 CCDC183Q5T5S1 534 aa29.15■■■□□ 2.26
CTSA-203ENST00000372459 ATL3Q6DD88 541 aa29.15■■■□□ 2.26
CTSA-203ENST00000372459 TBC1D22AQ8WUA7 517 aa29.15■■■□□ 2.26
CTSA-203ENST00000372459 MYL10Q9BUA6 226 aa29.15■■■□□ 2.26
CTSA-203ENST00000372459 MYH15Q9Y2K3 1946 aa29.15■■■□□ 2.26
CTSA-203ENST00000372459 SMIM22K7EJ46 135 aa29.15■■■□□ 2.26
CTSA-203ENST00000372459 TPRNQ4KMQ1 711 aa29.15■■■□□ 2.26
CTSA-203ENST00000372459 CCDC144CPQ8IYA2 1237 aa29.15■■■□□ 2.26
CTSA-203ENST00000372459 FBXO18Q8NFZ0 1043 aa29.15■■■□□ 2.26
CTSA-203ENST00000372459 PPP4CP60510 307 aa29.14■■■□□ 2.26
CTSA-203ENST00000372459 CERS3Q8IU89 383 aa29.14■■■□□ 2.26
CTSA-203ENST00000372459 FAM217BQ9NTX9 383 aaPredicted RBP29.14■■■□□ 2.26
CTSA-203ENST00000372459 MROH7-TTC4A0A0A0MT08 1334 aa29.14■■■□□ 2.26
CTSA-203ENST00000372459 TNKSO95271 1327 aa29.13■■■□□ 2.25
CTSA-203ENST00000372459 DIXDC1Q155Q3 683 aa29.13■■■□□ 2.25
CTSA-203ENST00000372459 TMX4Q9H1E5 349 aaPredicted RBP29.13■■■□□ 2.25
CTSA-203ENST00000372459 COL11A2P13942 1736 aaPredicted RBP29.13■■■□□ 2.25
CTSA-203ENST00000372459 RANBP6O60518 1105 aaKnown RBP29.13■■■□□ 2.25
CTSA-203ENST00000372459 USP5P45974 858 aa29.13■■■□□ 2.25
CTSA-203ENST00000372459 NTRK3Q16288 839 aa29.13■■■□□ 2.25
CTSA-203ENST00000372459 IQCA1Q86XH1 822 aa29.13■■■□□ 2.25
CTSA-203ENST00000372459 MPNDQ8N594 471 aa29.13■■■□□ 2.25
CTSA-203ENST00000372459 ZNF396Q96N95 335 aaPredicted RBP29.13■■■□□ 2.25
CTSA-203ENST00000372459 COA1Q9GZY4 146 aa29.13■■■□□ 2.25
CTSA-203ENST00000372459 RRAGDQ9NQL2 400 aaPredicted RBP29.13■■■□□ 2.25
CTSA-203ENST00000372459 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.13■■■□□ 2.25
CTSA-203ENST00000372459 ORC4O43929 436 aa29.12■■■□□ 2.25
CTSA-203ENST00000372459 IARSP41252 1262 aaKnown RBP29.12■■■□□ 2.25
CTSA-203ENST00000372459 SEC23AQ15436 765 aa29.12■■■□□ 2.25
CTSA-203ENST00000372459 SLC15A2Q16348 729 aa29.12■■■□□ 2.25
CTSA-203ENST00000372459 ZSCAN10Q96SZ4 725 aaPredicted RBP29.12■■■□□ 2.25
CTSA-203ENST00000372459 MCM9Q9NXL9 1143 aa29.12■■■□□ 2.25
CTSA-203ENST00000372459 GOLGA6L4A6NEF3 574 aa29.12■■■□□ 2.25
CTSA-203ENST00000372459 LETM1O95202 739 aaPredicted RBP29.12■■■□□ 2.25
CTSA-203ENST00000372459 EZH2Q15910 746 aaKnown RBP29.12■■■□□ 2.25
CTSA-203ENST00000372459 MFSD14BQ5SR56 506 aa29.12■■■□□ 2.25
CTSA-203ENST00000372459 SH3RF3Q8TEJ3 882 aaPredicted RBP29.12■■■□□ 2.25
CTSA-203ENST00000372459 CAMKK2Q96RR4 588 aa29.12■■■□□ 2.25
CTSA-203ENST00000372459 MYH2Q9UKX2 1941 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms