RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 BRF1Q92994 677 aa16.96■□□□□ 0.31
COL5A1-201ENST00000371817 SH3GL3Q99963 347 aa16.96■□□□□ 0.31
COL5A1-201ENST00000371817 CCDC85AQ96PX6 553 aaPredicted RBP16.96■□□□□ 0.3
COL5A1-201ENST00000371817 NOC4LQ9BVI4 516 aaKnown RBP16.96■□□□□ 0.3
COL5A1-201ENST00000371817 IGHDP01880 384 aa16.95■□□□□ 0.3
COL5A1-201ENST00000371817 DCAF17Q5H9S7 520 aaPredicted RBP16.95■□□□□ 0.3
COL5A1-201ENST00000371817 MCTP2Q6DN12 878 aa16.95■□□□□ 0.3
COL5A1-201ENST00000371817 TMEM132EQ6IEE7 984 aa16.95■□□□□ 0.3
COL5A1-201ENST00000371817 IQUBQ8NA54 791 aa16.95■□□□□ 0.3
COL5A1-201ENST00000371817 VAT1LQ9HCJ6 419 aa16.95■□□□□ 0.3
COL5A1-201ENST00000371817 RPL13P26373 211 aaKnown RBP16.95■□□□□ 0.3
COL5A1-201ENST00000371817 CCDC197Q8NCU1 140 aa16.95■□□□□ 0.3
COL5A1-201ENST00000371817 SCHIP1Q9P0W5 487 aaPredicted RBP16.95■□□□□ 0.3
COL5A1-201ENST00000371817 TAF11Q15544 211 aa16.95■□□□□ 0.3
COL5A1-201ENST00000371817 GDAP1L1Q96MZ0 367 aa16.95■□□□□ 0.3
COL5A1-201ENST00000371817 CNNM2Q9H8M5 875 aa16.95■□□□□ 0.3
COL5A1-201ENST00000371817 ATF3P18847 181 aa16.95■□□□□ 0.3
COL5A1-201ENST00000371817 C16orf87Q6PH81 154 aa16.95■□□□□ 0.3
COL5A1-201ENST00000371817 TMEM87AQ8NBN3 555 aa16.95■□□□□ 0.3
COL5A1-201ENST00000371817 TBC1D8BQ0IIM8 1120 aa16.95■□□□□ 0.3
COL5A1-201ENST00000371817 PPP2R5EQ16537 467 aa16.95■□□□□ 0.3
COL5A1-201ENST00000371817 SLC9C1Q4G0N8 1177 aa16.95■□□□□ 0.3
COL5A1-201ENST00000371817 ESYT1Q9BSJ8 1104 aa16.95■□□□□ 0.3
COL5A1-201ENST00000371817 PDE11AQ9HCR9 933 aa16.95■□□□□ 0.3
COL5A1-201ENST00000371817 ANKFY1Q9P2R3 1169 aa16.95■□□□□ 0.3
COL5A1-201ENST00000371817 ORC6Q9Y5N6 252 aa16.94■□□□□ 0.3
COL5A1-201ENST00000371817 C8orf34Q49A92 452 aa16.94■□□□□ 0.3
COL5A1-201ENST00000371817 CACYBPQ9HB71 228 aaKnown RBP16.94■□□□□ 0.3
COL5A1-201ENST00000371817 CALML3P27482 149 aa16.94■□□□□ 0.3
COL5A1-201ENST00000371817 MAP3K7O43318 606 aa16.94■□□□□ 0.3
COL5A1-201ENST00000371817 GUCY2FP51841 1108 aa16.94■□□□□ 0.3
COL5A1-201ENST00000371817 CCDC105Q8IYK2 499 aa16.94■□□□□ 0.3
COL5A1-201ENST00000371817 ST13P4Q8IZP2 240 aaPredicted RBP16.94■□□□□ 0.3
COL5A1-201ENST00000371817 FANCCQ00597 558 aa16.94■□□□□ 0.3
COL5A1-201ENST00000371817 DEUP1Q05D60 604 aa16.94■□□□□ 0.3
COL5A1-201ENST00000371817 SLC12A5Q9H2X9 1139 aa16.94■□□□□ 0.3
COL5A1-201ENST00000371817 PHBP35232 272 aa16.93■□□□□ 0.3
COL5A1-201ENST00000371817 LONP1P36776 959 aaKnown RBP16.93■□□□□ 0.3
COL5A1-201ENST00000371817 KLHL7Q8IXQ5 586 aa16.93■□□□□ 0.3
COL5A1-201ENST00000371817 SCYL3Q8IZE3 742 aa16.93■□□□□ 0.3
COL5A1-201ENST00000371817 ANKRD42Q8N9B4 389 aa16.93■□□□□ 0.3
COL5A1-201ENST00000371817 ZKSCAN3Q9BRR0 538 aa16.93■□□□□ 0.3
COL5A1-201ENST00000371817 KRT2P35908 639 aa16.93■□□□□ 0.3
COL5A1-201ENST00000371817 DYNC1I2Q13409 638 aaKnown RBP16.93■□□□□ 0.3
COL5A1-201ENST00000371817 CNPY4Q8N129 248 aa16.93■□□□□ 0.3
COL5A1-201ENST00000371817 CCDC152Q4G0S7 254 aa16.93■□□□□ 0.3
COL5A1-201ENST00000371817 DTHD1Q6ZMT9 781 aa16.93■□□□□ 0.3
COL5A1-201ENST00000371817 CCDC13Q8IYE1 715 aa16.93■□□□□ 0.3
COL5A1-201ENST00000371817 ARHGEF9O43307 516 aa16.93■□□□□ 0.3
COL5A1-201ENST00000371817 EPB41P11171 864 aaKnown RBP16.93■□□□□ 0.3
COL5A1-201ENST00000371817 RANBP1P43487 201 aa16.93■□□□□ 0.3
COL5A1-201ENST00000371817 PSMB7Q99436 277 aa16.93■□□□□ 0.3
COL5A1-201ENST00000371817 CCDC141Q6ZP82 1450 aa16.93■□□□□ 0.3
COL5A1-201ENST00000371817 MAGEA9P43362 315 aa16.92■□□□□ 0.3
COL5A1-201ENST00000371817 ARMC2Q8NEN0 867 aa16.92■□□□□ 0.3
COL5A1-201ENST00000371817 BAG5Q9UL15 447 aa16.92■□□□□ 0.3
COL5A1-201ENST00000371817 SLC24A3Q9HC58 644 aa16.92■□□□□ 0.3
COL5A1-201ENST00000371817 NSD3Q9BZ95 1437 aa16.92■□□□□ 0.3
COL5A1-201ENST00000371817 ASIC2Q16515 512 aa16.92■□□□□ 0.3
COL5A1-201ENST00000371817 RPS6KA1Q15418 735 aa16.92■□□□□ 0.3
COL5A1-201ENST00000371817 PIP4K2CQ8TBX8 421 aa16.92■□□□□ 0.3
COL5A1-201ENST00000371817 CCDC124Q96CT7 223 aaKnown RBP16.92■□□□□ 0.3
COL5A1-201ENST00000371817 IRAK4Q9NWZ3 460 aa16.92■□□□□ 0.3
COL5A1-201ENST00000371817 TSHZ3Q63HK5 1081 aa16.92■□□□□ 0.3
COL5A1-201ENST00000371817 A0A1B0GVL5 298 aa16.92■□□□□ 0.3
COL5A1-201ENST00000371817 DPH6Q7L8W6 267 aa16.92■□□□□ 0.3
COL5A1-201ENST00000371817 ARMC9Q7Z3E5 817 aa16.92■□□□□ 0.3
COL5A1-201ENST00000371817 CEP70Q8NHQ1 597 aa16.92■□□□□ 0.3
COL5A1-201ENST00000371817 AFG3L2Q9Y4W6 797 aa16.92■□□□□ 0.3
COL5A1-201ENST00000371817 HNRNPCP07910 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
COL5A1-201ENST00000371817 ZNF692Q9BU19 519 aaPredicted RBP16.92■□□□□ 0.3
COL5A1-201ENST00000371817 CBX8Q9HC52 389 aa16.92■□□□□ 0.3
COL5A1-201ENST00000371817 GUCY2CP25092 1073 aa16.91■□□□□ 0.3
COL5A1-201ENST00000371817 SEPT2Q15019 361 aa16.91■□□□□ 0.3
COL5A1-201ENST00000371817 VPS16Q9H269 839 aa16.91■□□□□ 0.3
COL5A1-201ENST00000371817 GOLGA8QA0A0J9YX86 632 aa16.91■□□□□ 0.3
COL5A1-201ENST00000371817 GOLGA8OA6NCC3 632 aa16.91■□□□□ 0.3
COL5A1-201ENST00000371817 GOLGA8NF8WBI6 632 aa16.91■□□□□ 0.3
COL5A1-201ENST00000371817 MMS22LQ6ZRQ5 1243 aa16.91■□□□□ 0.3
COL5A1-201ENST00000371817 PEX26Q7Z412 305 aa16.91■□□□□ 0.3
COL5A1-201ENST00000371817 LRGUKQ96M69 825 aa16.91■□□□□ 0.3
COL5A1-201ENST00000371817 KRT10P13645 584 aa16.91■□□□□ 0.3
COL5A1-201ENST00000371817 TTC19Q6DKK2 380 aaPredicted RBP16.91■□□□□ 0.3
COL5A1-201ENST00000371817 PAIP2BQ9ULR5 123 aaKnown RBP16.91■□□□□ 0.3
COL5A1-201ENST00000371817 CTAGE3PQ8IX95 158 aa16.91■□□□□ 0.3
COL5A1-201ENST00000371817 TOP2AP11388 1531 aaKnown RBP16.91■□□□□ 0.3
COL5A1-201ENST00000371817 ATP8B1O43520 1251 aa16.91■□□□□ 0.3
COL5A1-201ENST00000371817 CASC4Q6P4E1 433 aa16.91■□□□□ 0.3
COL5A1-201ENST00000371817 TRIM58Q8NG06 486 aa16.91■□□□□ 0.3
COL5A1-201ENST00000371817 PPWD1Q96BP3 646 aaKnown RBP16.91■□□□□ 0.3
COL5A1-201ENST00000371817 RBM8AQ9Y5S9 174 aaKnown RBP16.91■□□□□ 0.3
COL5A1-201ENST00000371817 KRT5P13647 590 aa16.91■□□□□ 0.3
COL5A1-201ENST00000371817 HEATR3Q7Z4Q2 680 aa16.91■□□□□ 0.3
COL5A1-201ENST00000371817 TXLNGQ9NUQ3 528 aa16.91■□□□□ 0.3
COL5A1-201ENST00000371817 APBA1Q02410 837 aa16.91■□□□□ 0.3
COL5A1-201ENST00000371817 CCDC138Q96M89 665 aa16.91■□□□□ 0.3
COL5A1-201ENST00000371817 ANLNQ9NQW6 1124 aa16.91■□□□□ 0.3
COL5A1-201ENST00000371817 LRRC2Q9BYS8 371 aa16.9■□□□□ 0.3
COL5A1-201ENST00000371817 HFM1A2PYH4 1435 aa16.9■□□□□ 0.3
COL5A1-201ENST00000371817 RNASELQ05823 741 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms