RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 HOOK2Q96ED9 719 aa22.54■■□□□ 1.2
LMNA-204ENST00000368298 RASSF10A6NK89 507 aa22.54■■□□□ 1.2
LMNA-204ENST00000368298 CHGBP05060 677 aa22.54■■□□□ 1.2
LMNA-204ENST00000368298 SLFNL1Q499Z3 407 aa22.54■■□□□ 1.2
LMNA-204ENST00000368298 FSD1Q9BTV5 496 aa22.54■■□□□ 1.2
LMNA-204ENST00000368298 SH3BP5LQ7L8J4 393 aa22.53■■□□□ 1.2
LMNA-204ENST00000368298 APPBP2Q92624 585 aa22.53■■□□□ 1.2
LMNA-204ENST00000368298 OSBPL5Q9H0X9 879 aaPredicted RBP22.53■■□□□ 1.2
LMNA-204ENST00000368298 UNCXA6NJT0 531 aa22.52■■□□□ 1.2
LMNA-204ENST00000368298 PPP1R12BO60237 982 aaPredicted RBP22.52■■□□□ 1.2
LMNA-204ENST00000368298 MAP3K10Q02779 954 aa22.52■■□□□ 1.2
LMNA-204ENST00000368298 PICALMQ13492 652 aa22.52■■□□□ 1.2
LMNA-204ENST00000368298 TGFBRAP1Q8WUH2 860 aa22.52■■□□□ 1.2
LMNA-204ENST00000368298 KLRG1Q96E93 195 aa22.52■■□□□ 1.2
LMNA-204ENST00000368298 PUS7LQ9H0K6 701 aaKnown RBP22.52■■□□□ 1.2
LMNA-204ENST00000368298 ABT1Q9ULW3 272 aaKnown RBP22.52■■□□□ 1.2
LMNA-204ENST00000368298 DDTLA6NHG4 134 aaPredicted RBP22.51■■□□□ 1.19
LMNA-204ENST00000368298 USP2O75604 605 aaPredicted RBP22.51■■□□□ 1.19
LMNA-204ENST00000368298 TTC22Q5TAA0 569 aa22.51■■□□□ 1.19
LMNA-204ENST00000368298 ARMC9Q7Z3E5 817 aa22.51■■□□□ 1.19
LMNA-204ENST00000368298 OSBP2Q969R2 916 aa22.51■■□□□ 1.19
LMNA-204ENST00000368298 DHX36Q9H2U1 1008 aaKnown RBP22.51■■□□□ 1.19
LMNA-204ENST00000368298 MKRN1Q9UHC7 482 aaKnown RBP22.51■■□□□ 1.19
LMNA-204ENST00000368298 LDLRAD1Q5T700 205 aa22.5■■□□□ 1.19
LMNA-204ENST00000368298 LCORLQ8N3X6 602 aa22.5■■□□□ 1.19
LMNA-204ENST00000368298 CRNKL1Q9BZJ0 848 aaKnown RBP22.5■■□□□ 1.19
LMNA-204ENST00000368298 FLT1P17948 1338 aa22.5■■□□□ 1.19
LMNA-204ENST00000368298 AK9Q5TCS8 1911 aa22.49■■□□□ 1.19
LMNA-204ENST00000368298 TRIM6-TRIM34B2RNG4 842 aa22.49■■□□□ 1.19
LMNA-204ENST00000368298 MBD4O95243 580 aa22.49■■□□□ 1.19
LMNA-204ENST00000368298 HUNKP57058 714 aa22.49■■□□□ 1.19
LMNA-204ENST00000368298 DEFB115Q30KQ5 88 aa22.49■■□□□ 1.19
LMNA-204ENST00000368298 ZMYM1Q5SVZ6 1142 aa22.49■■□□□ 1.19
LMNA-204ENST00000368298 AIDAQ96BJ3 306 aa22.49■■□□□ 1.19
LMNA-204ENST00000368298 MOB2Q70IA6 237 aa22.48■■□□□ 1.19
LMNA-204ENST00000368298 MAPKAPK5Q8IW41 473 aa22.48■■□□□ 1.19
LMNA-204ENST00000368298 CSRNP1Q96S65 589 aa22.48■■□□□ 1.19
LMNA-204ENST00000368298 STRBPQ96SI9 672 aaKnown RBP22.48■■□□□ 1.19
LMNA-204ENST00000368298 ARMT1Q9H993 441 aa22.48■■□□□ 1.19
LMNA-204ENST00000368298 ANGEL1Q9UNK9 670 aaKnown RBP22.48■■□□□ 1.19
LMNA-204ENST00000368298 UBE2Q2LH0YL09 131 aa22.47■■□□□ 1.19
LMNA-204ENST00000368298 TBC1D12O60347 775 aa22.47■■□□□ 1.19
LMNA-204ENST00000368298 GSPT1P15170 499 aaKnown RBP22.47■■□□□ 1.19
LMNA-204ENST00000368298 USP5P45974 858 aa22.47■■□□□ 1.19
LMNA-204ENST00000368298 IREB2P48200 963 aaKnown RBP22.47■■□□□ 1.19
LMNA-204ENST00000368298 TTLL12Q14166 644 aaPredicted RBP22.47■■□□□ 1.19
LMNA-204ENST00000368298 DCAF15Q66K64 600 aa22.47■■□□□ 1.19
LMNA-204ENST00000368298 RILPL2Q969X0 211 aa22.47■■□□□ 1.19
LMNA-204ENST00000368298 ATP8A2Q9NTI2 1148 aa22.47■■□□□ 1.19
LMNA-204ENST00000368298 METTL16Q86W50 562 aaKnown RBP22.47■■□□□ 1.19
LMNA-204ENST00000368298 ZSCAN29Q8IWY8 852 aaPredicted RBP22.47■■□□□ 1.19
LMNA-204ENST00000368298 ZNF112Q9UJU3 913 aa22.47■■□□□ 1.19
LMNA-204ENST00000368298 FZD1Q9UP38 647 aa22.47■■□□□ 1.19
LMNA-204ENST00000368298 DDX60LQ5H9U9 1706 aaKnown RBP22.46■■□□□ 1.19
LMNA-204ENST00000368298 PRKG1Q13976 671 aa22.46■■□□□ 1.19
LMNA-204ENST00000368298 RGMBQ6NW40 437 aa22.46■■□□□ 1.19
LMNA-204ENST00000368298 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.46■■□□□ 1.19
LMNA-204ENST00000368298 DCP1AQ9NPI6 582 aaPredicted RBP22.46■■□□□ 1.19
LMNA-204ENST00000368298 PI4KBQ9UBF8 816 aa22.46■■□□□ 1.19
LMNA-204ENST00000368298 MYH1P12882 1939 aa22.45■■□□□ 1.19
LMNA-204ENST00000368298 ANKRD13AQ8IZ07 590 aa22.45■■□□□ 1.18
LMNA-204ENST00000368298 ZNF341Q9BYN7 854 aa22.45■■□□□ 1.18
LMNA-204ENST00000368298 HELLSQ9NRZ9 838 aa22.45■■□□□ 1.18
LMNA-204ENST00000368298 M0R2C6 588 aa22.44■■□□□ 1.18
LMNA-204ENST00000368298 GPAA1O43292 621 aa22.44■■□□□ 1.18
LMNA-204ENST00000368298 PRKAB2O43741 272 aa22.44■■□□□ 1.18
LMNA-204ENST00000368298 GNAT2P19087 354 aa22.44■■□□□ 1.18
LMNA-204ENST00000368298 SDSP20132 328 aa22.44■■□□□ 1.18
LMNA-204ENST00000368298 MIGA2Q7L4E1 593 aa22.44■■□□□ 1.18
LMNA-204ENST00000368298 FOXP4Q8IVH2 680 aaPredicted RBP22.44■■□□□ 1.18
LMNA-204ENST00000368298 JMYQ8N9B5 988 aa22.44■■□□□ 1.18
LMNA-204ENST00000368298 SDR42E1Q8WUS8 393 aa22.44■■□□□ 1.18
LMNA-204ENST00000368298 SEC62Q99442 399 aaKnown RBP22.44■■□□□ 1.18
LMNA-204ENST00000368298 PALD1Q9ULE6 856 aa22.44■■□□□ 1.18
LMNA-204ENST00000368298 SIPA1L1O43166 1804 aa22.43■■□□□ 1.18
LMNA-204ENST00000368298 OTOFQ9HC10 1997 aa22.43■■□□□ 1.18
LMNA-204ENST00000368298 GIMAP6Q6P9H5 292 aa22.43■■□□□ 1.18
LMNA-204ENST00000368298 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.43■■□□□ 1.18
LMNA-204ENST00000368298 CCDC102AQ96A19 550 aa22.43■■□□□ 1.18
LMNA-204ENST00000368298 HERC5Q9UII4 1024 aaKnown RBP22.43■■□□□ 1.18
LMNA-204ENST00000368298 SLC4A4Q9Y6R1 1079 aa22.43■■□□□ 1.18
LMNA-204ENST00000368298 NAV1Q8NEY1 1877 aa22.42■■□□□ 1.18
LMNA-204ENST00000368298 PHF20L1A8MW92 1017 aa22.42■■□□□ 1.18
LMNA-204ENST00000368298 HIP1O00291 1037 aa22.42■■□□□ 1.18
LMNA-204ENST00000368298 ECE1P42892 770 aa22.42■■□□□ 1.18
LMNA-204ENST00000368298 VEGFBP49765 207 aa22.42■■□□□ 1.18
LMNA-204ENST00000368298 MAP3K9P80192 1104 aa22.42■■□□□ 1.18
LMNA-204ENST00000368298 TTC6Q86TZ1 520 aa22.42■■□□□ 1.18
LMNA-204ENST00000368298 GSG1L2A8MUP6 293 aa22.41■■□□□ 1.18
LMNA-204ENST00000368298 FAM155AB1AL88 458 aaPredicted RBP22.41■■□□□ 1.18
LMNA-204ENST00000368298 ZNF157P51786 506 aaPredicted RBP22.41■■□□□ 1.18
LMNA-204ENST00000368298 CAPNS2Q96L46 248 aa22.41■■□□□ 1.18
LMNA-204ENST00000368298 EHD4Q9H223 541 aa22.41■■□□□ 1.18
LMNA-204ENST00000368298 SAP30BPQ9UHR5 308 aaKnown RBP22.41■■□□□ 1.18
LMNA-204ENST00000368298 HLA-DOAP06340 250 aa22.41■■□□□ 1.18
LMNA-204ENST00000368298 MCMDC2Q4G0Z9 681 aa22.41■■□□□ 1.18
LMNA-204ENST00000368298 CYP4F22Q6NT55 531 aa22.41■■□□□ 1.18
LMNA-204ENST00000368298 FAM227BQ96M60 508 aa22.41■■□□□ 1.18
LMNA-204ENST00000368298 WRNIP1Q96S55 665 aa22.41■■□□□ 1.18
LMNA-204ENST00000368298 TAOK2Q9UL54 1235 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms