RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 UBR1Q8IWV7 1749 aa7.07□□□□□ -1.28
ECHDC1-204ENST00000368292 KDM5AP29375 1690 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-204ENST00000368292 DLL1O00548 723 aa7.07□□□□□ -1.28
ECHDC1-204ENST00000368292 CDC25BP30305 580 aa7.07□□□□□ -1.28
ECHDC1-204ENST00000368292 FGD1P98174 961 aa7.07□□□□□ -1.28
ECHDC1-204ENST00000368292 TXNDC11Q6PKC3 985 aa7.07□□□□□ -1.28
ECHDC1-204ENST00000368292 PI16Q6UXB8 463 aa7.07□□□□□ -1.28
ECHDC1-204ENST00000368292 VN1R5Q7Z5H4 357 aa7.07□□□□□ -1.28
ECHDC1-204ENST00000368292 FAM177A1Q8N128 213 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-204ENST00000368292 GALNT11Q8NCW6 608 aa7.07□□□□□ -1.28
ECHDC1-204ENST00000368292 BSNDQ8WZ55 320 aa7.07□□□□□ -1.28
ECHDC1-204ENST00000368292 CEP350Q5VT06 3117 aa7.07□□□□□ -1.28
ECHDC1-204ENST00000368292 PRDM15P57071 1507 aaPredicted RBP7.06□□□□□ -1.28
ECHDC1-204ENST00000368292 PNMA6FA0A0J9YX94 578 aa7.06□□□□□ -1.28
ECHDC1-204ENST00000368292 LTKP29376 864 aa7.06□□□□□ -1.28
ECHDC1-204ENST00000368292 GRIA4P48058 902 aa7.06□□□□□ -1.28
ECHDC1-204ENST00000368292 SPRED3Q2MJR0 410 aa7.06□□□□□ -1.28
ECHDC1-204ENST00000368292 EAPPQ56P03 285 aaPredicted RBP7.06□□□□□ -1.28
ECHDC1-204ENST00000368292 DEFB132Q7Z7B7 95 aa7.06□□□□□ -1.28
ECHDC1-204ENST00000368292 LENG1Q96BZ8 264 aaPredicted RBP7.06□□□□□ -1.28
ECHDC1-204ENST00000368292 SETDB2Q96T68 719 aa7.06□□□□□ -1.28
ECHDC1-204ENST00000368292 PSMD1Q99460 953 aa7.06□□□□□ -1.28
ECHDC1-204ENST00000368292 LIN7BQ9HAP6 207 aa7.06□□□□□ -1.28
ECHDC1-204ENST00000368292 SRA1Q9HD15 236 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-204ENST00000368292 WWC3Q9ULE0 1092 aa7.06□□□□□ -1.28
ECHDC1-204ENST00000368292 MAST1Q9Y2H9 1570 aa7.06□□□□□ -1.28
ECHDC1-204ENST00000368292 NCOA2Q15596 1464 aa7.05□□□□□ -1.28
ECHDC1-204ENST00000368292 ARHGAP23Q9P227 1491 aa7.05□□□□□ -1.28
ECHDC1-204ENST00000368292 FSCN2O14926 492 aa7.05□□□□□ -1.28
ECHDC1-204ENST00000368292 PROCP04070 461 aa7.05□□□□□ -1.28
ECHDC1-204ENST00000368292 MAPK8P45983 427 aa7.05□□□□□ -1.28
ECHDC1-204ENST00000368292 HGSNATQ68CP4 663 aa7.05□□□□□ -1.28
ECHDC1-204ENST00000368292 MAP4K3Q8IVH8 894 aa7.05□□□□□ -1.28
ECHDC1-204ENST00000368292 GLIS3Q8NEA6 775 aa7.05□□□□□ -1.28
ECHDC1-204ENST00000368292 ASAP3Q8TDY4 903 aa7.05□□□□□ -1.28
ECHDC1-204ENST00000368292 EHD4Q9H223 541 aa7.05□□□□□ -1.28
ECHDC1-204ENST00000368292 SYCP2Q9BX26 1530 aa7.05□□□□□ -1.28
ECHDC1-204ENST00000368292 CDC42BPAQ5VT25 1732 aa7.04□□□□□ -1.28
ECHDC1-204ENST00000368292 A0A096LPE4 126 aa7.04□□□□□ -1.28
ECHDC1-204ENST00000368292 A0A1W2PPZ6 126 aa7.04□□□□□ -1.28
ECHDC1-204ENST00000368292 H3BRJ5 948 aa7.04□□□□□ -1.28
ECHDC1-204ENST00000368292 SOX1O00570 391 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-204ENST00000368292 APBA3O96018 575 aa7.04□□□□□ -1.28
ECHDC1-204ENST00000368292 VAMP1P23763 118 aa7.04□□□□□ -1.28
ECHDC1-204ENST00000368292 GRM2Q14416 872 aa7.04□□□□□ -1.28
ECHDC1-204ENST00000368292 GPAT2Q6NUI2 795 aa7.04□□□□□ -1.28
ECHDC1-204ENST00000368292 IGF2-ASQ6U949 168 aa7.04□□□□□ -1.28
ECHDC1-204ENST00000368292 CARD10Q9BWT7 1032 aa7.04□□□□□ -1.28
ECHDC1-204ENST00000368292 KCNK4Q9NYG8 393 aa7.04□□□□□ -1.28
ECHDC1-204ENST00000368292 SLIT1O75093 1534 aa7.04□□□□□ -1.28
ECHDC1-204ENST00000368292 LRRIQ1Q96JM4 1722 aa7.04□□□□□ -1.28
ECHDC1-204ENST00000368292 BLMP54132 1417 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-204ENST00000368292 TROQ12816 1431 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-204ENST00000368292 C9orf172C9J069 976 aa7.03□□□□□ -1.28
ECHDC1-204ENST00000368292 C1QTNF8P60827 252 aa7.03□□□□□ -1.28
ECHDC1-204ENST00000368292 FOXD4L6Q3SYB3 417 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-204ENST00000368292 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.03□□□□□ -1.28
ECHDC1-204ENST00000368292 PRPF40BQ6NWY9 871 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-204ENST00000368292 FOXD4L3Q6VB84 417 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-204ENST00000368292 KLHDC7BQ96G42 594 aa7.03□□□□□ -1.28
ECHDC1-204ENST00000368292 C8orf37Q96NL8 207 aa7.03□□□□□ -1.28
ECHDC1-204ENST00000368292 NACC1Q96RE7 527 aa7.03□□□□□ -1.28
ECHDC1-204ENST00000368292 SPOCK3Q9BQ16 436 aa7.03□□□□□ -1.28
ECHDC1-204ENST00000368292 ABCB6Q9NP58 842 aa7.03□□□□□ -1.28
ECHDC1-204ENST00000368292 CAMTA1Q9Y6Y1 1673 aa7.03□□□□□ -1.28
ECHDC1-204ENST00000368292 ABCC3O15438 1527 aa7.02□□□□□ -1.29
ECHDC1-204ENST00000368292 PPM1GO15355 546 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-204ENST00000368292 GADD45BO75293 160 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-204ENST00000368292 ESRRAP11474 423 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-204ENST00000368292 ITPKAP23677 461 aa7.02□□□□□ -1.29
ECHDC1-204ENST00000368292 CD68P34810 354 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-204ENST00000368292 CABP4P57796 275 aa7.02□□□□□ -1.29
ECHDC1-204ENST00000368292 ADGRE1Q14246 886 aa7.02□□□□□ -1.29
ECHDC1-204ENST00000368292 MBTPS1Q14703 1052 aa7.02□□□□□ -1.29
ECHDC1-204ENST00000368292 WNT8BQ93098 351 aa7.02□□□□□ -1.29
ECHDC1-204ENST00000368292 CWC22Q9HCG8 908 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-204ENST00000368292 NKTRP30414 1462 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-204ENST00000368292 SPAG9O60271 1321 aaKnown RBP7.01□□□□□ -1.29
ECHDC1-204ENST00000368292 MSH6P52701 1360 aa7.01□□□□□ -1.29
ECHDC1-204ENST00000368292 MSTNO14793 375 aa7.01□□□□□ -1.29
ECHDC1-204ENST00000368292 DDX3YO15523 660 aaKnown RBP7.01□□□□□ -1.29
ECHDC1-204ENST00000368292 ADAM11O75078 769 aa7.01□□□□□ -1.29
ECHDC1-204ENST00000368292 ZNF423Q2M1K9 1284 aa7.01□□□□□ -1.29
ECHDC1-204ENST00000368292 FAM117BQ6P1L5 589 aa7.01□□□□□ -1.29
ECHDC1-204ENST00000368292 CERS3Q8IU89 383 aa7.01□□□□□ -1.29
ECHDC1-204ENST00000368292 KLHL23Q8NBE8 558 aa7.01□□□□□ -1.29
ECHDC1-204ENST00000368292 FBF1Q8TES7 1133 aa7.01□□□□□ -1.29
ECHDC1-204ENST00000368292 BCO2Q9BYV7 579 aa7.01□□□□□ -1.29
ECHDC1-204ENST00000368292 OSGEPQ9NPF4 335 aa7.01□□□□□ -1.29
ECHDC1-204ENST00000368292 SEC31BQ9NQW1 1179 aa7.01□□□□□ -1.29
ECHDC1-204ENST00000368292 RNF19AQ9NV58 838 aa7.01□□□□□ -1.29
ECHDC1-204ENST00000368292 TET3O43151 1660 aa7□□□□□ -1.29
ECHDC1-204ENST00000368292 BRWD3Q6RI45 1802 aa7□□□□□ -1.29
ECHDC1-204ENST00000368292 TMEM238LA0A1B0GVL6 79 aa7□□□□□ -1.29
ECHDC1-204ENST00000368292 FAM177BA6PVY3 158 aa7□□□□□ -1.29
ECHDC1-204ENST00000368292 WISP1O95388 367 aa7□□□□□ -1.29
ECHDC1-204ENST00000368292 RECKO95980 971 aa7□□□□□ -1.29
ECHDC1-204ENST00000368292 IGHA1P01876 353 aa7□□□□□ -1.29
ECHDC1-204ENST00000368292 KCNA6P17658 529 aa7□□□□□ -1.29
ECHDC1-204ENST00000368292 NRG1Q02297 640 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms