RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 HOOK3Q86VS8 718 aa12.18□□□□□ -0.46
PTPRK-205ENST00000368213 CSRNP1Q96S65 589 aa12.18□□□□□ -0.46
PTPRK-205ENST00000368213 PSMA7O14818 248 aa12.18□□□□□ -0.46
PTPRK-205ENST00000368213 LRRC45Q96CN5 670 aa12.18□□□□□ -0.46
PTPRK-205ENST00000368213 SLC10A4Q96EP9 437 aa12.18□□□□□ -0.46
PTPRK-205ENST00000368213 PLIN2Q99541 437 aa12.18□□□□□ -0.46
PTPRK-205ENST00000368213 LZTS2Q9BRK4 669 aa12.18□□□□□ -0.46
PTPRK-205ENST00000368213 ICA1Q05084 483 aa12.18□□□□□ -0.46
PTPRK-205ENST00000368213 STX1AQ16623 288 aa12.18□□□□□ -0.46
PTPRK-205ENST00000368213 V9GY48 417 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-205ENST00000368213 ZBTB7BO15156 539 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-205ENST00000368213 MYCP01106 439 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-205ENST00000368213 MCM4P33991 863 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 NOP2P46087 812 aaKnown RBP12.17□□□□□ -0.46
PTPRK-205ENST00000368213 KCTD2Q14681 263 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 AATKQ6ZMQ8 1374 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 GSTTP1A0A1W2PQM5 241 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 CHMLP26374 656 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 IGSF1Q8N6C5 1336 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 TMCO5BA8MYB1 307 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 CCNT1O60563 726 aaKnown RBP12.17□□□□□ -0.46
PTPRK-205ENST00000368213 HAUS3Q68CZ6 603 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 ARHGEF35A5YM69 484 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 USP17L12C9JPN9 530 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 USP17L21D6R901 530 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 ABCB5Q2M3G0 1257 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 CDAN1Q8IWY9 1227 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 FNBP1Q96RU3 617 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 PSMD1Q99460 953 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 OVOS2A0A0G2JMS6 1433 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 OVOS2A0A0J9YW53 1432 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 OVOS2Q6IE36 1432 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 DEXIO95424 95 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 ACTN2P35609 894 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 NCAPH2Q6IBW4 605 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 RUFY3Q7L099 469 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 HACE1Q8IYU2 909 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 PODXL2Q9NZ53 605 aa12.17□□□□□ -0.46
PTPRK-205ENST00000368213 ERVV-1B6SEH8 477 aa12.16□□□□□ -0.46
PTPRK-205ENST00000368213 ZSCAN22P10073 491 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-205ENST00000368213 LMAN1P49257 510 aa12.16□□□□□ -0.46
PTPRK-205ENST00000368213 N4BP3O15049 544 aa12.16□□□□□ -0.46
PTPRK-205ENST00000368213 PPARAQ07869 468 aa12.16□□□□□ -0.46
PTPRK-205ENST00000368213 BMS1Q14692 1282 aaKnown RBP12.16□□□□□ -0.46
PTPRK-205ENST00000368213 PNMA6EA0A0J9YXQ4 647 aa12.16□□□□□ -0.46
PTPRK-205ENST00000368213 TESPA1A2RU30 521 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-205ENST00000368213 USP17L3A6NCW0 530 aa12.16□□□□□ -0.46
PTPRK-205ENST00000368213 USP17L4A6NCW7 530 aa12.16□□□□□ -0.46
PTPRK-205ENST00000368213 ZNF174Q15697 407 aa12.16□□□□□ -0.46
PTPRK-205ENST00000368213 USP17L1Q7RTZ2 530 aa12.16□□□□□ -0.46
PTPRK-205ENST00000368213 PLEKHM2Q8IWE5 1019 aa12.16□□□□□ -0.46
PTPRK-205ENST00000368213 RIMBP3CA6NJZ7 1639 aa12.16□□□□□ -0.46
PTPRK-205ENST00000368213 RIMBP3BA6NNM3 1639 aa12.16□□□□□ -0.46
PTPRK-205ENST00000368213 RIMBP3Q9UFD9 1639 aa12.16□□□□□ -0.46
PTPRK-205ENST00000368213 CDC42BPGQ6DT37 1551 aa12.16□□□□□ -0.46
PTPRK-205ENST00000368213 EZRP15311 586 aaKnown RBP12.16□□□□□ -0.46
PTPRK-205ENST00000368213 MSANTD4Q8NCY6 345 aa12.16□□□□□ -0.46
PTPRK-205ENST00000368213 ANGEL1Q9UNK9 670 aaKnown RBP12.16□□□□□ -0.46
PTPRK-205ENST00000368213 PRDM15P57071 1507 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-205ENST00000368213 PDE4DQ08499 809 aa12.15□□□□□ -0.46
PTPRK-205ENST00000368213 BIRC3Q13489 604 aa12.15□□□□□ -0.46
PTPRK-205ENST00000368213 GRAPQ13588 217 aa12.15□□□□□ -0.46
PTPRK-205ENST00000368213 GRAPLQ8TC17 118 aaPredicted RBP12.15□□□□□ -0.46
PTPRK-205ENST00000368213 KIF1BO60333 1816 aa12.15□□□□□ -0.46
PTPRK-205ENST00000368213 LRRC24Q50LG9 513 aa12.15□□□□□ -0.46
PTPRK-205ENST00000368213 PIK3AP1Q6ZUJ8 805 aa12.15□□□□□ -0.46
PTPRK-205ENST00000368213 CCDC65Q8IXS2 484 aa12.15□□□□□ -0.46
PTPRK-205ENST00000368213 SEC31BQ9NQW1 1179 aa12.15□□□□□ -0.46
PTPRK-205ENST00000368213 TRPC6Q9Y210 931 aa12.15□□□□□ -0.46
PTPRK-205ENST00000368213 CEP83Q9Y592 693 aa12.15□□□□□ -0.46
PTPRK-205ENST00000368213 HEG1Q9ULI3 1381 aa12.15□□□□□ -0.46
PTPRK-205ENST00000368213 SHROOM2Q13796 1616 aa12.15□□□□□ -0.46
PTPRK-205ENST00000368213 SEMA3EO15041 775 aa12.15□□□□□ -0.46
PTPRK-205ENST00000368213 USP14P54578 494 aa12.15□□□□□ -0.46
PTPRK-205ENST00000368213 PRPF4BQ13523 1007 aaKnown RBP12.15□□□□□ -0.46
PTPRK-205ENST00000368213 PNMA2Q9UL42 364 aa12.15□□□□□ -0.46
PTPRK-205ENST00000368213 SSX2IPQ9Y2D8 614 aa12.15□□□□□ -0.46
PTPRK-205ENST00000368213 MYOM2P54296 1465 aa12.15□□□□□ -0.46
PTPRK-205ENST00000368213 SLC8A3P57103 927 aa12.15□□□□□ -0.46
PTPRK-205ENST00000368213 RGS22Q8NE09 1264 aa12.15□□□□□ -0.46
PTPRK-205ENST00000368213 MRPS27Q92552 414 aaKnown RBP12.15□□□□□ -0.46
PTPRK-205ENST00000368213 KIF24Q5T7B8 1368 aa12.15□□□□□ -0.46
PTPRK-205ENST00000368213 KIF5CO60282 957 aa12.15□□□□□ -0.47
PTPRK-205ENST00000368213 SPTLC2O15270 562 aa12.14□□□□□ -0.47
PTPRK-205ENST00000368213 ZSCAN12O43309 604 aa12.14□□□□□ -0.47
PTPRK-205ENST00000368213 ADRA2BP18089 450 aa12.14□□□□□ -0.47
PTPRK-205ENST00000368213 SV2BQ7L1I2 683 aa12.14□□□□□ -0.47
PTPRK-205ENST00000368213 MRPL11Q9Y3B7 192 aaKnown RBP12.14□□□□□ -0.47
PTPRK-205ENST00000368213 AK2P54819 239 aa12.14□□□□□ -0.47
PTPRK-205ENST00000368213 MAEAQ7L5Y9 396 aa12.14□□□□□ -0.47
PTPRK-205ENST00000368213 LUZP1Q86V48 1076 aa12.14□□□□□ -0.47
PTPRK-205ENST00000368213 RNF169Q8NCN4 708 aa12.14□□□□□ -0.47
PTPRK-205ENST00000368213 LRRC47Q8N1G4 583 aaKnown RBP12.14□□□□□ -0.47
PTPRK-205ENST00000368213 FAM227BQ96M60 508 aa12.14□□□□□ -0.47
PTPRK-205ENST00000368213 ALS2CR12Q96Q35 445 aa12.14□□□□□ -0.47
PTPRK-205ENST00000368213 STK24Q9Y6E0 443 aa12.14□□□□□ -0.47
PTPRK-205ENST00000368213 TXKP42681 527 aa12.14□□□□□ -0.47
PTPRK-205ENST00000368213 MCF2L2Q86YR7 1114 aa12.14□□□□□ -0.47
PTPRK-205ENST00000368213 METTL13Q8N6R0 699 aa12.14□□□□□ -0.47
PTPRK-205ENST00000368213 VWA3AA6NCI4 1184 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms