RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 IDH1O75874 414 aaKnown RBP11.63□□□□□ -0.55
PTPRA-203ENST00000356147 TATP17735 454 aaPredicted RBP11.63□□□□□ -0.55
PTPRA-203ENST00000356147 CCDC191Q8NCU4 936 aa11.63□□□□□ -0.55
PTPRA-203ENST00000356147 PLBD2Q8NHP8 589 aa11.63□□□□□ -0.55
PTPRA-203ENST00000356147 MED15Q96RN5 788 aa11.63□□□□□ -0.55
PTPRA-203ENST00000356147 HPSEQ9Y251 543 aa11.63□□□□□ -0.55
PTPRA-203ENST00000356147 MRFAP1Q9Y605 127 aa11.63□□□□□ -0.55
PTPRA-203ENST00000356147 RHOXF2BP0C7M4 288 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 SMYD4Q8IYR2 804 aaPredicted RBP11.62□□□□□ -0.55
PTPRA-203ENST00000356147 RHOXF2Q9BQY4 288 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 FUT8Q9BYC5 575 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 MAN1B1Q9UKM7 699 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 C5P01031 1676 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 H7C1W4 665 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 CCP110O43303 1012 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 RANBP6O60518 1105 aaKnown RBP11.62□□□□□ -0.55
PTPRA-203ENST00000356147 KCNJ6P48051 423 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 TRDNQ13061 729 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 ZSCAN26Q16670 478 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 LONRF2Q1L5Z9 754 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 TAF7LQ5H9L4 462 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 RRP12Q5JTH9 1297 aaKnown RBP11.62□□□□□ -0.55
PTPRA-203ENST00000356147 STAMQ92783 540 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 FAM89AQ96GI7 184 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 C19orf44Q9H6X5 657 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 TOMM22Q9NS69 142 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 FEZ2Q9UHY8 353 aaPredicted RBP11.62□□□□□ -0.55
PTPRA-203ENST00000356147 RFX7Q2KHR2 1363 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 TULP2O00295 520 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 AFMP43652 599 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 CERS3Q8IU89 383 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 KIFC2Q96AC6 838 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 MAP3K14Q99558 947 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 TEX13AQ9BXU3 409 aaPredicted RBP11.62□□□□□ -0.55
PTPRA-203ENST00000356147 PDE11AQ9HCR9 933 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 VPS18Q9P253 973 aa11.62□□□□□ -0.55
PTPRA-203ENST00000356147 IARSP41252 1262 aaKnown RBP11.61□□□□□ -0.55
PTPRA-203ENST00000356147 NR5A1Q13285 461 aa11.61□□□□□ -0.55
PTPRA-203ENST00000356147 RESP18Q5W5W9 173 aa11.61□□□□□ -0.55
PTPRA-203ENST00000356147 APOA5Q6Q788 366 aa11.61□□□□□ -0.55
PTPRA-203ENST00000356147 MPHOSPH8Q99549 860 aa11.61□□□□□ -0.55
PTPRA-203ENST00000356147 ADAM21Q9UKJ8 722 aa11.61□□□□□ -0.55
PTPRA-203ENST00000356147 ANGEL1Q9UNK9 670 aaKnown RBP11.61□□□□□ -0.55
PTPRA-203ENST00000356147 hCG_1642624A0A1W2PR95 340 aa11.61□□□□□ -0.55
PTPRA-203ENST00000356147 CCDC57Q2TAC2 916 aa11.61□□□□□ -0.55
PTPRA-203ENST00000356147 SLC9C2Q5TAH2 1124 aa11.61□□□□□ -0.55
PTPRA-203ENST00000356147 SPECC1LQ69YQ0 1117 aa11.61□□□□□ -0.55
PTPRA-203ENST00000356147 FOXR1Q6PIV2 292 aa11.61□□□□□ -0.55
PTPRA-203ENST00000356147 IFNL2Q8IZJ0 200 aa11.61□□□□□ -0.55
PTPRA-203ENST00000356147 GPR161Q8N6U8 529 aaKnown RBP11.61□□□□□ -0.55
PTPRA-203ENST00000356147 PLEKHA4Q9H4M7 779 aa11.61□□□□□ -0.55
PTPRA-203ENST00000356147 GOLGA8AA7E2F4 631 aa11.6□□□□□ -0.55
PTPRA-203ENST00000356147 CTDSPL2Q05D32 466 aa11.6□□□□□ -0.55
PTPRA-203ENST00000356147 TRIM29Q14134 588 aa11.6□□□□□ -0.55
PTPRA-203ENST00000356147 RAD9BQ6WBX8 426 aa11.6□□□□□ -0.55
PTPRA-203ENST00000356147 KRT28Q7Z3Y7 464 aa11.6□□□□□ -0.55
PTPRA-203ENST00000356147 PNKPQ96T60 521 aa11.6□□□□□ -0.55
PTPRA-203ENST00000356147 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.6□□□□□ -0.55
PTPRA-203ENST00000356147 SRRTQ9BXP5 876 aaKnown RBP11.6□□□□□ -0.55
PTPRA-203ENST00000356147 SNAP23O00161 211 aa11.6□□□□□ -0.55
PTPRA-203ENST00000356147 POSTNQ15063 836 aa11.6□□□□□ -0.55
PTPRA-203ENST00000356147 ZNF569Q5MCW4 686 aa11.6□□□□□ -0.55
PTPRA-203ENST00000356147 RSRC2Q7L4I2 434 aaKnown RBP11.6□□□□□ -0.55
PTPRA-203ENST00000356147 JMYQ8N9B5 988 aa11.6□□□□□ -0.55
PTPRA-203ENST00000356147 APPBP2Q92624 585 aa11.6□□□□□ -0.55
PTPRA-203ENST00000356147 GOLGA1Q92805 767 aa11.6□□□□□ -0.55
PTPRA-203ENST00000356147 ZBTB43O43298 467 aa11.6□□□□□ -0.55
PTPRA-203ENST00000356147 CDC5LQ99459 802 aaKnown RBP11.6□□□□□ -0.55
PTPRA-203ENST00000356147 HINFPQ9BQA5 517 aa11.6□□□□□ -0.55
PTPRA-203ENST00000356147 PCDHB6Q9Y5E3 794 aa11.6□□□□□ -0.55
PTPRA-203ENST00000356147 UBN2Q6ZU65 1347 aa11.59□□□□□ -0.55
PTPRA-203ENST00000356147 FAM205CA6NFA0 338 aa11.59□□□□□ -0.55
PTPRA-203ENST00000356147 CDC25AP30304 524 aa11.59□□□□□ -0.55
PTPRA-203ENST00000356147 MCAMP43121 646 aa11.59□□□□□ -0.55
PTPRA-203ENST00000356147 CHMP4BP1P59074 171 aa11.59□□□□□ -0.55
PTPRA-203ENST00000356147 TBX2Q13207 712 aaPredicted RBP11.59□□□□□ -0.55
PTPRA-203ENST00000356147 TMEM67Q5HYA8 995 aa11.59□□□□□ -0.55
PTPRA-203ENST00000356147 ACRBPQ8NEB7 543 aa11.59□□□□□ -0.55
PTPRA-203ENST00000356147 ZMYM6O95789 1325 aa11.59□□□□□ -0.55
PTPRA-203ENST00000356147 PPP6R2O75170 966 aa11.59□□□□□ -0.55
PTPRA-203ENST00000356147 TOB1P50616 345 aaPredicted RBP11.59□□□□□ -0.55
PTPRA-203ENST00000356147 RBL2Q08999 1139 aa11.59□□□□□ -0.55
PTPRA-203ENST00000356147 KIF4BQ2VIQ3 1234 aa11.59□□□□□ -0.55
PTPRA-203ENST00000356147 TXLNBQ8N3L3 684 aa11.59□□□□□ -0.55
PTPRA-203ENST00000356147 KRI1Q8N9T8 703 aaKnown RBP11.59□□□□□ -0.55
PTPRA-203ENST00000356147 HELBQ8NG08 1087 aaPredicted RBP11.59□□□□□ -0.55
PTPRA-203ENST00000356147 GDAP1L1Q96MZ0 367 aa11.59□□□□□ -0.55
PTPRA-203ENST00000356147 RAI14Q9P0K7 980 aa11.59□□□□□ -0.55
PTPRA-203ENST00000356147 AFDNP55196 1824 aaKnown RBP11.58□□□□□ -0.56
PTPRA-203ENST00000356147 SH2B2O14492 632 aaPredicted RBP11.58□□□□□ -0.56
PTPRA-203ENST00000356147 STX10O60499 249 aa11.58□□□□□ -0.56
PTPRA-203ENST00000356147 GPTP24298 496 aa11.58□□□□□ -0.56
PTPRA-203ENST00000356147 CCT6AP40227 531 aaKnown RBP11.58□□□□□ -0.56
PTPRA-203ENST00000356147 DIS3L2Q8IYB7 885 aaKnown RBP11.58□□□□□ -0.56
PTPRA-203ENST00000356147 OXER1Q8TDS5 423 aa11.58□□□□□ -0.56
PTPRA-203ENST00000356147 UBXN6Q9BZV1 441 aa11.58□□□□□ -0.56
PTPRA-203ENST00000356147 FAM217BQ9NTX9 383 aaPredicted RBP11.58□□□□□ -0.56
PTPRA-203ENST00000356147 MEGF6O75095 1541 aa11.58□□□□□ -0.56
PTPRA-203ENST00000356147 TXLNAP40222 546 aa11.58□□□□□ -0.56
PTPRA-203ENST00000356147 GPS2Q13227 327 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms