RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 CST9Q5W186 159 aa21.51■■□□□ 1.03
PDLIM7-202ENST00000355841 CWC27Q6UX04 472 aaKnown RBP21.51■■□□□ 1.03
PDLIM7-202ENST00000355841 SH3BP5LQ7L8J4 393 aa21.51■■□□□ 1.03
PDLIM7-202ENST00000355841 FAM151AQ8WW52 585 aa21.51■■□□□ 1.03
PDLIM7-202ENST00000355841 STRBPQ96SI9 672 aaKnown RBP21.51■■□□□ 1.03
PDLIM7-202ENST00000355841 CRNKL1Q9BZJ0 848 aaKnown RBP21.51■■□□□ 1.03
PDLIM7-202ENST00000355841 DIAPH3Q9NSV4 1193 aa21.51■■□□□ 1.03
PDLIM7-202ENST00000355841 SAP30BPQ9UHR5 308 aaKnown RBP21.51■■□□□ 1.03
PDLIM7-202ENST00000355841 PRKG1Q13976 671 aa21.5■■□□□ 1.03
PDLIM7-202ENST00000355841 BMP2KLQ5H9B9 411 aa21.5■■□□□ 1.03
PDLIM7-202ENST00000355841 ZSCAN29Q8IWY8 852 aaPredicted RBP21.5■■□□□ 1.03
PDLIM7-202ENST00000355841 DDTLA6NHG4 134 aaPredicted RBP21.5■■□□□ 1.03
PDLIM7-202ENST00000355841 ENTPD3O75355 529 aa21.5■■□□□ 1.03
PDLIM7-202ENST00000355841 SLURP2P0DP57 97 aa21.5■■□□□ 1.03
PDLIM7-202ENST00000355841 C1QTNF8P60827 252 aa21.5■■□□□ 1.03
PDLIM7-202ENST00000355841 OSBPL5Q9H0X9 879 aaPredicted RBP21.5■■□□□ 1.03
PDLIM7-202ENST00000355841 PPP2R3BQ9Y5P8 575 aa21.5■■□□□ 1.03
PDLIM7-202ENST00000355841 SLC4A4Q9Y6R1 1079 aa21.5■■□□□ 1.03
PDLIM7-202ENST00000355841 CERS3Q8IU89 383 aa21.49■■□□□ 1.03
PDLIM7-202ENST00000355841 AK9Q5TCS8 1911 aa21.49■■□□□ 1.03
PDLIM7-202ENST00000355841 MOB2Q70IA6 237 aa21.48■■□□□ 1.03
PDLIM7-202ENST00000355841 ZNF589Q86UQ0 364 aaPredicted RBP21.48■■□□□ 1.03
PDLIM7-202ENST00000355841 HELLSQ9NRZ9 838 aa21.48■■□□□ 1.03
PDLIM7-202ENST00000355841 PALD1Q9ULE6 856 aa21.48■■□□□ 1.03
PDLIM7-202ENST00000355841 SSC5DA1L4H1 1573 aa21.47■■□□□ 1.03
PDLIM7-202ENST00000355841 CHMLP26374 656 aa21.47■■□□□ 1.03
PDLIM7-202ENST00000355841 MCMDC2Q4G0Z9 681 aa21.47■■□□□ 1.03
PDLIM7-202ENST00000355841 MIGA2Q7L4E1 593 aa21.47■■□□□ 1.03
PDLIM7-202ENST00000355841 IL25Q9H293 177 aa21.47■■□□□ 1.03
PDLIM7-202ENST00000355841 NPM3O75607 178 aaKnown RBP21.47■■□□□ 1.03
PDLIM7-202ENST00000355841 CSRNP1Q96S65 589 aa21.47■■□□□ 1.03
PDLIM7-202ENST00000355841 DCP1AQ9NPI6 582 aaPredicted RBP21.47■■□□□ 1.03
PDLIM7-202ENST00000355841 MKRN1Q9UHC7 482 aaKnown RBP21.47■■□□□ 1.03
PDLIM7-202ENST00000355841 CDK5RAP2Q96SN8 1893 aa21.46■■□□□ 1.03
PDLIM7-202ENST00000355841 HIP1O00291 1037 aa21.46■■□□□ 1.03
PDLIM7-202ENST00000355841 EVX2Q03828 476 aa21.46■■□□□ 1.03
PDLIM7-202ENST00000355841 SUPT20HL1Q3ZLR7 823 aa21.46■■□□□ 1.03
PDLIM7-202ENST00000355841 VPS53Q5VIR6 699 aa21.46■■□□□ 1.03
PDLIM7-202ENST00000355841 TICAM2Q86XR7 235 aa21.46■■□□□ 1.03
PDLIM7-202ENST00000355841 GSG1L2A8MUP6 293 aa21.45■■□□□ 1.02
PDLIM7-202ENST00000355841 APPP05067 770 aa21.45■■□□□ 1.02
PDLIM7-202ENST00000355841 HTRA3P83110 453 aa21.45■■□□□ 1.02
PDLIM7-202ENST00000355841 MCM9Q9NXL9 1143 aa21.45■■□□□ 1.02
PDLIM7-202ENST00000355841 FAM196BA6NMK8 535 aa21.44■■□□□ 1.02
PDLIM7-202ENST00000355841 NF2P35240 595 aa21.44■■□□□ 1.02
PDLIM7-202ENST00000355841 APLP1P51693 650 aa21.44■■□□□ 1.02
PDLIM7-202ENST00000355841 TTLL12Q14166 644 aaPredicted RBP21.44■■□□□ 1.02
PDLIM7-202ENST00000355841 RPAP1Q9BWH6 1393 aaPredicted RBP21.44■■□□□ 1.02
PDLIM7-202ENST00000355841 TMEM88BA6NKF7 163 aa21.44■■□□□ 1.02
PDLIM7-202ENST00000355841 FOXP2O15409 715 aa21.44■■□□□ 1.02
PDLIM7-202ENST00000355841 CYP2D6P10635 497 aa21.44■■□□□ 1.02
PDLIM7-202ENST00000355841 GBA2Q9HCG7 927 aaPredicted RBP21.44■■□□□ 1.02
PDLIM7-202ENST00000355841 EPB41L4AQ9HCS5 686 aaPredicted RBP21.44■■□□□ 1.02
PDLIM7-202ENST00000355841 ATP8A2Q9NTI2 1148 aa21.44■■□□□ 1.02
PDLIM7-202ENST00000355841 ATRNL1Q5VV63 1379 aa21.43■■□□□ 1.02
PDLIM7-202ENST00000355841 CYP2D7A0A087X1C5 515 aa21.43■■□□□ 1.02
PDLIM7-202ENST00000355841 SMIM22K7EJ46 135 aa21.43■■□□□ 1.02
PDLIM7-202ENST00000355841 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.43■■□□□ 1.02
PDLIM7-202ENST00000355841 FOCADQ5VW36 1801 aa21.43■■□□□ 1.02
PDLIM7-202ENST00000355841 CCDC171Q6TFL3 1326 aa21.42■■□□□ 1.02
PDLIM7-202ENST00000355841 UBE2Q2LH0YL09 131 aa21.42■■□□□ 1.02
PDLIM7-202ENST00000355841 GNAT2P19087 354 aa21.42■■□□□ 1.02
PDLIM7-202ENST00000355841 PLCD1P51178 756 aa21.42■■□□□ 1.02
PDLIM7-202ENST00000355841 ANGEL1Q9UNK9 670 aaKnown RBP21.42■■□□□ 1.02
PDLIM7-202ENST00000355841 PATL2C9JE40 543 aaKnown RBP21.41■■□□□ 1.02
PDLIM7-202ENST00000355841 USP17L12C9JPN9 530 aa21.41■■□□□ 1.02
PDLIM7-202ENST00000355841 USP17L21D6R901 530 aa21.41■■□□□ 1.02
PDLIM7-202ENST00000355841 POLR3DP05423 398 aaPredicted RBP21.41■■□□□ 1.02
PDLIM7-202ENST00000355841 C2orf69Q8N8R5 385 aa21.41■■□□□ 1.02
PDLIM7-202ENST00000355841 DHX36Q9H2U1 1008 aaKnown RBP21.41■■□□□ 1.02
PDLIM7-202ENST00000355841 ABT1Q9ULW3 272 aaKnown RBP21.41■■□□□ 1.02
PDLIM7-202ENST00000355841 PPP1R12BO60237 982 aaPredicted RBP21.4■■□□□ 1.02
PDLIM7-202ENST00000355841 USP2O75604 605 aaPredicted RBP21.4■■□□□ 1.02
PDLIM7-202ENST00000355841 IFNL3Q8IZI9 196 aa21.4■■□□□ 1.02
PDLIM7-202ENST00000355841 DDRGK1Q96HY6 314 aa21.4■■□□□ 1.02
PDLIM7-202ENST00000355841 PI4KBQ9UBF8 816 aa21.4■■□□□ 1.02
PDLIM7-202ENST00000355841 TRPM7Q96QT4 1865 aa21.4■■□□□ 1.02
PDLIM7-202ENST00000355841 HSPD1P10809 573 aaKnown RBP21.4■■□□□ 1.02
PDLIM7-202ENST00000355841 TDO2P48775 406 aa21.4■■□□□ 1.02
PDLIM7-202ENST00000355841 CTR9Q6PD62 1173 aa21.4■■□□□ 1.02
PDLIM7-202ENST00000355841 COL2A1P02458 1487 aaPredicted RBP21.39■■□□□ 1.01
PDLIM7-202ENST00000355841 CDC45O75419 566 aa21.39■■□□□ 1.01
PDLIM7-202ENST00000355841 HSPA6P17066 643 aa21.39■■□□□ 1.01
PDLIM7-202ENST00000355841 NAV1Q8NEY1 1877 aa21.39■■□□□ 1.01
PDLIM7-202ENST00000355841 BAZ2AQ9UIF9 1905 aaKnown RBP21.39■■□□□ 1.01
PDLIM7-202ENST00000355841 HLA-DOAP06340 250 aa21.38■■□□□ 1.01
PDLIM7-202ENST00000355841 HUNKP57058 714 aa21.38■■□□□ 1.01
PDLIM7-202ENST00000355841 DCAF15Q66K64 600 aa21.38■■□□□ 1.01
PDLIM7-202ENST00000355841 ARMC9Q7Z3E5 817 aa21.38■■□□□ 1.01
PDLIM7-202ENST00000355841 SAPCD2Q86UD0 394 aa21.38■■□□□ 1.01
PDLIM7-202ENST00000355841 STK11IPQ8N1F8 1099 aa21.38■■□□□ 1.01
PDLIM7-202ENST00000355841 RUFY2Q8WXA3 655 aa21.38■■□□□ 1.01
PDLIM7-202ENST00000355841 NACAP1Q9BZK3 213 aa21.38■■□□□ 1.01
PDLIM7-202ENST00000355841 DNAJC18Q9H819 358 aa21.38■■□□□ 1.01
PDLIM7-202ENST00000355841 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.38■■□□□ 1.012e-6■■■■■ 52.9
PDLIM7-202ENST00000355841 CREBZFQ9NS37 354 aa21.38■■□□□ 1.01
PDLIM7-202ENST00000355841 MYH1P12882 1939 aa21.38■■□□□ 1.01
PDLIM7-202ENST00000355841 MINDY4BA8MYZ0 360 aa21.37■■□□□ 1.01
PDLIM7-202ENST00000355841 SGSM2O43147 1006 aa21.37■■□□□ 1.01
PDLIM7-202ENST00000355841 GIMAP6Q6P9H5 292 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms