RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 CABP5Q9NP86 173 aa14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 A0A087WUV0 522 aaPredicted RBP14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 CCDC65Q8IXS2 484 aa14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 CSGALNACT2Q8N6G5 542 aa14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 PPP2R2CQ9Y2T4 447 aa14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 CETN3O15182 167 aa14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 GNA11P29992 359 aa14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 DDX21Q9NR30 783 aaKnown RBP eCLIP14.19□□□□□ -0.14
SYNCRIP-201ENST00000355238 NDC80O14777 642 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 DENND2CQ68D51 928 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 RAB17Q9H0T7 212 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 DDX41Q9UJV9 622 aaKnown RBP14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 FAM169AQ9Y6X4 670 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 SPOPO43791 374 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 FAM13AO94988 1023 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 FAM173BQ6P4H8 233 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 SDCCAG8Q86SQ7 713 aaPredicted RBP14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 TRIM58Q8NG06 486 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 LINS1Q8NG48 757 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 NUF2Q9BZD4 464 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 ARHGEF11O15085 1522 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 POLR2DO15514 142 aaKnown RBP14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 CEP104O60308 925 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 POSTNQ15063 836 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 CYB5RLQ6IPT4 315 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 OSCARQ8IYS5 282 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 TRAF5O00463 557 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 GMNNO75496 209 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 LRMPQ12912 555 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 KLHL7Q8IXQ5 586 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 MSANTD4Q8NCY6 345 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 TACO1Q9BSH4 297 aaKnown RBP14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 NUCKS1Q9H1E3 243 aaKnown RBP14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 ZWINTO95229 277 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 RPS6KA1Q15418 735 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 CDC37L1Q7L3B6 337 aa14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 PA2G4Q9UQ80 394 aaKnown RBP14.18□□□□□ -0.14
SYNCRIP-201ENST00000355238 HLA-DOAP06340 250 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 SMC1BQ8NDV3 1235 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 KLHL14Q9P2G3 628 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 BCAP29Q9UHQ4 241 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 NOS1P29475 1434 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 LRRD1A4D1F6 860 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 DEXIO95424 95 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 PDE4DQ08499 809 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 KLHL34Q8N239 644 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 PDE11AQ9HCR9 933 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 LARSQ9P2J5 1176 aaKnown RBP14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 STK38LQ9Y2H1 464 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 MSH6P52701 1360 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 EPB41P11171 864 aaKnown RBP14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 TNFAIP3P21580 790 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 TMEM87BQ96K49 555 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 CTNNA1P35221 906 aaKnown RBP14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 RNASE9P60153 205 aaKnown RBP14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 CCDC170Q8IYT3 715 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 GPT2Q8TD30 523 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 TM6SF1Q9BZW5 370 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 HOMER3Q9NSC5 361 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 TRPC3Q13507 836 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 ANKRD20A3Q5VUR7 823 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 TSPYL6Q8N831 410 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 EXOC4Q96A65 974 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 TCHPQ9BT92 498 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 JRKLQ9Y4A0 524 aa14.17□□□□□ -0.14
SYNCRIP-201ENST00000355238 HSPA1LP34931 641 aa14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 NAP1L4Q99733 375 aaKnown RBP14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 TRIM4Q9C037 500 aa14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 KIF14Q15058 1648 aa14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 RGS16O15492 202 aaPredicted RBP14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 ANXA1P04083 346 aa14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 MAP3K21Q5TCX8 1036 aa14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 RRP36Q96EU6 259 aaKnown RBP14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 TXNDC9O14530 226 aa14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 LMBR1LQ6UX01 489 aa14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 KIAA1468Q9P260 1216 aa14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 PYCARDQ9ULZ3 195 aa14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 SSH2Q76I76 1423 aa14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 PRAG1Q86YV5 1406 aa14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 CCT5P48643 541 aa14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 UAP1Q16222 522 aaPredicted RBP14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 CCDC84Q86UT8 332 aaPredicted RBP14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 IFNL2Q8IZJ0 200 aa14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 HMGB2P26583 209 aaKnown RBP14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 DCAF17Q5H9S7 520 aaPredicted RBP14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 STAG1Q8WVM7 1258 aa14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 TRIM31Q9BZY9 425 aa14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 FAN1Q9Y2M0 1017 aa14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 GPTP24298 496 aa14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 PEX19P40855 299 aa14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 KIFAP3Q92845 792 aa14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 TAB2Q9NYJ8 693 aa14.16□□□□□ -0.14
SYNCRIP-201ENST00000355238 PPP2R5EQ16537 467 aa14.15□□□□□ -0.14
SYNCRIP-201ENST00000355238 ADALQ6DHV7 355 aa14.15□□□□□ -0.14
SYNCRIP-201ENST00000355238 HYOU1Q9Y4L1 999 aa14.15□□□□□ -0.14
SYNCRIP-201ENST00000355238 I3L4J1 428 aa14.15□□□□□ -0.14
SYNCRIP-201ENST00000355238 ZNF174Q15697 407 aa14.15□□□□□ -0.14
SYNCRIP-201ENST00000355238 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.15□□□□□ -0.14
SYNCRIP-201ENST00000355238 FAM204AQ9H8W3 233 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms