RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 TFRCP02786 760 aaKnown RBP19.76■□□□□ 0.75
COPE-202ENST00000349893 IFIT1P09914 478 aaKnown RBP19.76■□□□□ 0.75
COPE-202ENST00000349893 MAP3K10Q02779 954 aa19.76■□□□□ 0.75
COPE-202ENST00000349893 SLC4A10Q6U841 1118 aa19.76■□□□□ 0.75
COPE-202ENST00000349893 SCYL3Q8IZE3 742 aa19.76■□□□□ 0.75
COPE-202ENST00000349893 AFG3L2Q9Y4W6 797 aa19.76■□□□□ 0.75
COPE-202ENST00000349893 PHIPQ8WWQ0 1821 aa19.76■□□□□ 0.75
COPE-202ENST00000349893 DOCK3Q8IZD9 2030 aa19.75■□□□□ 0.75
COPE-202ENST00000349893 PTPRAP18433 802 aa19.75■□□□□ 0.75
COPE-202ENST00000349893 PAWRQ96IZ0 340 aaKnown RBP19.75■□□□□ 0.75
COPE-202ENST00000349893 ZHX2Q9Y6X8 837 aa19.75■□□□□ 0.75
COPE-202ENST00000349893 LAMA2P24043 3122 aaKnown RBP19.74■□□□□ 0.75
COPE-202ENST00000349893 RFX7Q2KHR2 1363 aa19.74■□□□□ 0.75
COPE-202ENST00000349893 TNPO2O14787 897 aaKnown RBP19.74■□□□□ 0.75
COPE-202ENST00000349893 DIXDC1Q155Q3 683 aa19.74■□□□□ 0.75
COPE-202ENST00000349893 ANKLE1Q8NAG6 615 aa19.74■□□□□ 0.75
COPE-202ENST00000349893 ZBTB22O15209 634 aa19.73■□□□□ 0.75
COPE-202ENST00000349893 LRIT3Q3SXY7 679 aa19.73■□□□□ 0.75
COPE-202ENST00000349893 NECAB2Q7Z6G3 386 aa19.73■□□□□ 0.75
COPE-202ENST00000349893 ZFPM1Q8IX07 1006 aa19.73■□□□□ 0.75
COPE-202ENST00000349893 IDI2Q9BXS1 227 aa19.73■□□□□ 0.75
COPE-202ENST00000349893 SPINK5Q9NQ38 1064 aaPredicted RBP19.73■□□□□ 0.75
COPE-202ENST00000349893 DOCK1Q14185 1865 aa19.73■□□□□ 0.75
COPE-202ENST00000349893 SALL1Q9NSC2 1324 aa19.73■□□□□ 0.75
COPE-202ENST00000349893 PRDX5P30044 214 aa19.72■□□□□ 0.75
COPE-202ENST00000349893 KLHDC4Q8TBB5 520 aa19.72■□□□□ 0.75
COPE-202ENST00000349893 LPIN2Q92539 896 aa19.72■□□□□ 0.75
COPE-202ENST00000349893 PICK1Q9NRD5 415 aa19.72■□□□□ 0.75
COPE-202ENST00000349893 USP40Q9NVE5 1235 aa19.72■□□□□ 0.75
COPE-202ENST00000349893 STXBP5LQ9Y2K9 1186 aa19.72■□□□□ 0.75
COPE-202ENST00000349893 ENTPD3O75355 529 aa19.71■□□□□ 0.75
COPE-202ENST00000349893 FAM110CQ1W6H9 321 aa19.71■□□□□ 0.75
COPE-202ENST00000349893 DIS3LQ8TF46 1054 aaKnown RBP19.71■□□□□ 0.75
COPE-202ENST00000349893 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.71■□□□□ 0.758e-6■□□□□ 10.8
COPE-202ENST00000349893 CTNND1O60716 968 aaKnown RBP19.7■□□□□ 0.74
COPE-202ENST00000349893 SLC5A1P13866 664 aa19.7■□□□□ 0.74
COPE-202ENST00000349893 GADL1Q6ZQY3 521 aa19.7■□□□□ 0.74
COPE-202ENST00000349893 DEFB123Q8N688 67 aa19.7■□□□□ 0.74
COPE-202ENST00000349893 SMCR8Q8TEV9 937 aaPredicted RBP19.7■□□□□ 0.74
COPE-202ENST00000349893 COA7Q96BR5 231 aa19.7■□□□□ 0.74
COPE-202ENST00000349893 AGTPBP1Q9UPW5 1226 aa19.7■□□□□ 0.74
COPE-202ENST00000349893 LDHBP07195 334 aaKnown RBP19.69■□□□□ 0.74
COPE-202ENST00000349893 RFX5P48382 616 aaPredicted RBP19.69■□□□□ 0.74
COPE-202ENST00000349893 RGS3P49796 1198 aa19.69■□□□□ 0.74
COPE-202ENST00000349893 SH3BP5LQ7L8J4 393 aa19.69■□□□□ 0.74
COPE-202ENST00000349893 GAKO14976 1311 aa19.69■□□□□ 0.74
COPE-202ENST00000349893 LOC285556D6RIA3 1793 aa19.68■□□□□ 0.74
COPE-202ENST00000349893 EYA2O00167 538 aa19.68■□□□□ 0.74
COPE-202ENST00000349893 HMGCRP04035 888 aa19.68■□□□□ 0.74
COPE-202ENST00000349893 ANKRD13CQ8N6S4 541 aa19.68■□□□□ 0.74
COPE-202ENST00000349893 MYH2Q9UKX2 1941 aa19.67■□□□□ 0.74
COPE-202ENST00000349893 VCANP13611 3396 aa19.67■□□□□ 0.74
COPE-202ENST00000349893 ZEB1P37275 1124 aaPredicted RBP19.67■□□□□ 0.74
COPE-202ENST00000349893 ATG9AQ7Z3C6 839 aa19.67■□□□□ 0.74
COPE-202ENST00000349893 C7orf61Q8IZ16 206 aa19.67■□□□□ 0.74
COPE-202ENST00000349893 NBPF3Q9H094 633 aa19.67■□□□□ 0.74
COPE-202ENST00000349893 USP44Q9H0E7 712 aa19.67■□□□□ 0.74
COPE-202ENST00000349893 MTMR10Q9NXD2 777 aa19.67■□□□□ 0.74
COPE-202ENST00000349893 DDX60LQ5H9U9 1706 aaKnown RBP19.67■□□□□ 0.74
COPE-202ENST00000349893 DNAH12Q6ZR08 3092 aa19.66■□□□□ 0.74
COPE-202ENST00000349893 SEMA3EO15041 775 aa19.66■□□□□ 0.74
COPE-202ENST00000349893 Q7L0L9 218 aa19.66■□□□□ 0.74
COPE-202ENST00000349893 TDHQ8IZJ6 230 aa19.66■□□□□ 0.74
COPE-202ENST00000349893 PROCA1Q8NCQ7 364 aaPredicted RBP19.66■□□□□ 0.74
COPE-202ENST00000349893 GJD2Q9UKL4 321 aa19.66■□□□□ 0.74
COPE-202ENST00000349893 PNMA3Q9UL41 463 aa19.66■□□□□ 0.74
COPE-202ENST00000349893 LRRFIP2Q9Y608 721 aaKnown RBP19.66■□□□□ 0.74
COPE-202ENST00000349893 RPTORQ8N122 1335 aa19.66■□□□□ 0.74
COPE-202ENST00000349893 DDTLA6NHG4 134 aaPredicted RBP19.65■□□□□ 0.74
COPE-202ENST00000349893 TRIM75PA6NK02 468 aa19.65■□□□□ 0.74
COPE-202ENST00000349893 MAGEA10P43363 369 aaPredicted RBP19.65■□□□□ 0.74
COPE-202ENST00000349893 TREML2Q5T2D2 321 aa19.65■□□□□ 0.74
COPE-202ENST00000349893 FAM163AQ96GL9 167 aaPredicted RBP19.65■□□□□ 0.74
COPE-202ENST00000349893 FBXO3Q9UK99 471 aa19.65■□□□□ 0.74
COPE-202ENST00000349893 OGDHLQ9ULD0 1010 aa19.65■□□□□ 0.74
COPE-202ENST00000349893 ZMYND8Q9ULU4 1186 aaPredicted RBP19.65■□□□□ 0.74
COPE-202ENST00000349893 PLXNB2O15031 1838 aa19.65■□□□□ 0.74
COPE-202ENST00000349893 TBC1D12O60347 775 aa19.64■□□□□ 0.73
COPE-202ENST00000349893 GCLCP48506 637 aaPredicted RBP19.64■□□□□ 0.73
COPE-202ENST00000349893 HMX1Q9NP08 348 aaPredicted RBP19.64■□□□□ 0.73
COPE-202ENST00000349893 GNL3LQ9NVN8 582 aaKnown RBP19.64■□□□□ 0.73
COPE-202ENST00000349893 DENND2AQ9ULE3 1009 aa19.64■□□□□ 0.73
COPE-202ENST00000349893 EYSQ5T1H1 3165 aa19.63■□□□□ 0.73
COPE-202ENST00000349893 PTPRCP08575 1304 aa19.63■□□□□ 0.73
COPE-202ENST00000349893 CIAO1O76071 339 aa19.63■□□□□ 0.73
COPE-202ENST00000349893 SLURP2P0DP57 97 aa19.63■□□□□ 0.73
COPE-202ENST00000349893 MAP3K21Q5TCX8 1036 aa19.63■□□□□ 0.73
COPE-202ENST00000349893 C11orf49Q9H6J7 331 aa19.63■□□□□ 0.73
COPE-202ENST00000349893 DDX4Q9NQI0 724 aaKnown RBP19.63■□□□□ 0.73
COPE-202ENST00000349893 TAOK2Q9UL54 1235 aa19.63■□□□□ 0.73
COPE-202ENST00000349893 SALL2Q9Y467 1007 aaPredicted RBP19.63■□□□□ 0.73
COPE-202ENST00000349893 COL2A1P02458 1487 aaPredicted RBP19.62■□□□□ 0.73
COPE-202ENST00000349893 PDS5AQ29RF7 1337 aaKnown RBP19.62■□□□□ 0.73
COPE-202ENST00000349893 NPM3O75607 178 aaKnown RBP19.62■□□□□ 0.73
COPE-202ENST00000349893 ATP2B3Q16720 1220 aa19.62■□□□□ 0.73
COPE-202ENST00000349893 ZGPATQ8N5A5 531 aaKnown RBP19.62■□□□□ 0.73
COPE-202ENST00000349893 MRPL50Q8N5N7 158 aaKnown RBP19.62■□□□□ 0.73
COPE-202ENST00000349893 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.62■□□□□ 0.73
COPE-202ENST00000349893 PFASO15067 1338 aa19.61■□□□□ 0.73
COPE-202ENST00000349893 TRIM32Q13049 653 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms