RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 SPDYE4A6NLX3 237 aa15.33■□□□□ 0.04
CASC4-202ENST00000345795 FAM196BA6NMK8 535 aa15.33■□□□□ 0.04
CASC4-202ENST00000345795 CTDNEP1O95476 244 aa15.33■□□□□ 0.04
CASC4-202ENST00000345795 STRBPQ96SI9 672 aaKnown RBP15.33■□□□□ 0.04
CASC4-202ENST00000345795 FAM205CA6NFA0 338 aa15.32■□□□□ 0.04
CASC4-202ENST00000345795 KIF28PB7ZC32 967 aa15.32■□□□□ 0.04
CASC4-202ENST00000345795 PATL2C9JE40 543 aaKnown RBP15.32■□□□□ 0.04
CASC4-202ENST00000345795 ZNF202O95125 648 aa15.32■□□□□ 0.04
CASC4-202ENST00000345795 TFAP4Q01664 338 aa15.32■□□□□ 0.04
CASC4-202ENST00000345795 SMYD4Q8IYR2 804 aaPredicted RBP15.32■□□□□ 0.04
CASC4-202ENST00000345795 RNF41Q9H4P4 317 aaPredicted RBP15.32■□□□□ 0.04
CASC4-202ENST00000345795 NFIXQ14938 502 aa15.32■□□□□ 0.04
CASC4-202ENST00000345795 STX1AQ16623 288 aa15.32■□□□□ 0.04
CASC4-202ENST00000345795 LRP10Q7Z4F1 713 aa15.32■□□□□ 0.04
CASC4-202ENST00000345795 NKX2-3Q8TAU0 364 aa15.32■□□□□ 0.04
CASC4-202ENST00000345795 BLZF1Q9H2G9 400 aa15.32■□□□□ 0.04
CASC4-202ENST00000345795 MROH5Q6ZUA9 1318 aa15.32■□□□□ 0.04
CASC4-202ENST00000345795 DPCR1Q3MIW9 517 aa15.32■□□□□ 0.04
CASC4-202ENST00000345795 PARP10Q53GL7 1025 aa15.32■□□□□ 0.04
CASC4-202ENST00000345795 CLEC10AQ8IUN9 316 aa15.32■□□□□ 0.04
CASC4-202ENST00000345795 ZNF654Q8IZM8 581 aa15.32■□□□□ 0.04
CASC4-202ENST00000345795 CRACR2BQ8N4Y2 399 aaPredicted RBP15.32■□□□□ 0.04
CASC4-202ENST00000345795 REREQ9P2R6 1566 aa15.31■□□□□ 0.04
CASC4-202ENST00000345795 RESTQ13127 1097 aa15.31■□□□□ 0.04
CASC4-202ENST00000345795 GLIPR1L2Q4G1C9 344 aa15.31■□□□□ 0.04
CASC4-202ENST00000345795 FBXO18Q8NFZ0 1043 aa15.31■□□□□ 0.04
CASC4-202ENST00000345795 ARHGEF1Q92888 912 aaKnown RBP15.31■□□□□ 0.04
CASC4-202ENST00000345795 KRT23Q9C075 422 aa15.31■□□□□ 0.04
CASC4-202ENST00000345795 ZYXQ15942 572 aaKnown RBP15.31■□□□□ 0.04
CASC4-202ENST00000345795 RBM26Q5T8P6 1007 aaKnown RBP15.31■□□□□ 0.04
CASC4-202ENST00000345795 USP17L3A6NCW0 530 aa15.31■□□□□ 0.04
CASC4-202ENST00000345795 USP17L4A6NCW7 530 aa15.31■□□□□ 0.04
CASC4-202ENST00000345795 CIAO1O76071 339 aa15.31■□□□□ 0.04
CASC4-202ENST00000345795 TNNT1P13805 278 aa15.31■□□□□ 0.04
CASC4-202ENST00000345795 USP17L1Q7RTZ2 530 aa15.31■□□□□ 0.04
CASC4-202ENST00000345795 MXD3Q9BW11 206 aa15.31■□□□□ 0.04
CASC4-202ENST00000345795 UBA5Q9GZZ9 404 aa15.31■□□□□ 0.04
CASC4-202ENST00000345795 GPCPD1Q9NPB8 672 aa15.31■□□□□ 0.04
CASC4-202ENST00000345795 MON2Q7Z3U7 1717 aa15.31■□□□□ 0.04
CASC4-202ENST00000345795 PLEKHA8P1O95397 391 aa15.3■□□□□ 0.04
CASC4-202ENST00000345795 SLURP2P0DP57 97 aa15.3■□□□□ 0.04
CASC4-202ENST00000345795 DNA2P51530 1060 aa15.3■□□□□ 0.04
CASC4-202ENST00000345795 ANTXR2P58335 489 aa15.3■□□□□ 0.04
CASC4-202ENST00000345795 OXER1Q8TDS5 423 aa15.3■□□□□ 0.04
CASC4-202ENST00000345795 MINPP1Q9UNW1 487 aa15.3■□□□□ 0.04
CASC4-202ENST00000345795 CAMTA1Q9Y6Y1 1673 aa15.3■□□□□ 0.04
CASC4-202ENST00000345795 SKILP12757 684 aa15.3■□□□□ 0.04
CASC4-202ENST00000345795 PFKFB1P16118 471 aa15.3■□□□□ 0.04
CASC4-202ENST00000345795 EIF5P55010 431 aaKnown RBP15.3■□□□□ 0.04
CASC4-202ENST00000345795 CLSTN2Q9H4D0 955 aa15.3■□□□□ 0.04
CASC4-202ENST00000345795 FAM160A1Q05DH4 1040 aa15.3■□□□□ 0.04
CASC4-202ENST00000345795 INTS5Q6P9B9 1019 aaKnown RBP15.3■□□□□ 0.04
CASC4-202ENST00000345795 CCDC34Q96HJ3 373 aa15.3■□□□□ 0.04
CASC4-202ENST00000345795 CCDC194A0A1B0GVG4 234 aa15.29■□□□□ 0.04
CASC4-202ENST00000345795 FOXN1O15353 648 aa15.29■□□□□ 0.04
CASC4-202ENST00000345795 IDEP14735 1019 aa15.29■□□□□ 0.04
CASC4-202ENST00000345795 PDE4BQ07343 736 aa15.29■□□□□ 0.04
CASC4-202ENST00000345795 RAD51AP2Q09MP3 1159 aa15.29■□□□□ 0.04
CASC4-202ENST00000345795 MFSD14BQ5SR56 506 aa15.29■□□□□ 0.04
CASC4-202ENST00000345795 ADGRA1Q86SQ6 560 aa15.29■□□□□ 0.04
CASC4-202ENST00000345795 KIAA0825Q8IV33 1275 aa15.29■□□□□ 0.04
CASC4-202ENST00000345795 RASGRP2Q7LDG7 609 aa15.29■□□□□ 0.04
CASC4-202ENST00000345795 TEX11Q8IYF3 940 aa15.29■□□□□ 0.04
CASC4-202ENST00000345795 SEPT12Q8IYM1 358 aa15.29■□□□□ 0.04
CASC4-202ENST00000345795 QTRT2Q9H974 415 aaKnown RBP15.29■□□□□ 0.04
CASC4-202ENST00000345795 MED23Q9ULK4 1368 aa15.29■□□□□ 0.04
CASC4-202ENST00000345795 UTYO14607 1347 aa15.29■□□□□ 0.04
CASC4-202ENST00000345795 CCDC196A0A1B0GTZ2 297 aa15.29■□□□□ 0.04
CASC4-202ENST00000345795 ZC3H12CQ9C0D7 883 aaKnown RBP15.29■□□□□ 0.04
CASC4-202ENST00000345795 EPB41L4AQ9HCS5 686 aaPredicted RBP15.29■□□□□ 0.04
CASC4-202ENST00000345795 RNF216Q9NWF9 866 aaPredicted RBP15.29■□□□□ 0.04
CASC4-202ENST00000345795 FRMPD2Q68DX3 1309 aaPredicted RBP15.28■□□□□ 0.04
CASC4-202ENST00000345795 SFPQP23246 707 aaKnown RBP eCLIP15.28■□□□□ 0.04
CASC4-202ENST00000345795 MECOMQ03112 1051 aa15.28■□□□□ 0.04
CASC4-202ENST00000345795 KCNG4Q8TDN1 519 aa15.28■□□□□ 0.04
CASC4-202ENST00000345795 NCOA3Q9Y6Q9 1424 aa15.28■□□□□ 0.04
CASC4-202ENST00000345795 CAMTA2O94983 1202 aa15.28■□□□□ 0.04
CASC4-202ENST00000345795 SOGA3Q5TF21 947 aa15.28■□□□□ 0.04
CASC4-202ENST00000345795 ANKRD26Q9UPS8 1709 aa15.28■□□□□ 0.04
CASC4-202ENST00000345795 FDPSP14324 419 aaKnown RBP15.28■□□□□ 0.04
CASC4-202ENST00000345795 LRRC47Q8N1G4 583 aaKnown RBP15.28■□□□□ 0.04
CASC4-202ENST00000345795 CPDO75976 1380 aa15.27■□□□□ 0.04
CASC4-202ENST00000345795 GSG1L2A8MUP6 293 aa15.27■□□□□ 0.04
CASC4-202ENST00000345795 APBA3O96018 575 aa15.27■□□□□ 0.04
CASC4-202ENST00000345795 CCT6AP40227 531 aaKnown RBP15.27■□□□□ 0.04
CASC4-202ENST00000345795 JAKMIP3Q5VZ66 844 aa15.27■□□□□ 0.04
CASC4-202ENST00000345795 FANCBQ8NB91 859 aa15.27■□□□□ 0.04
CASC4-202ENST00000345795 DBNDD1Q9H9R9 158 aa15.27■□□□□ 0.04
CASC4-202ENST00000345795 NOL7Q9UMY1 257 aaKnown RBP15.27■□□□□ 0.04
CASC4-202ENST00000345795 ZNF804BA4D1E1 1349 aa15.27■□□□□ 0.04
CASC4-202ENST00000345795 OVOS2A0A0G2JMS6 1433 aa15.27■□□□□ 0.04
CASC4-202ENST00000345795 LETM2Q2VYF4 491 aa15.27■□□□□ 0.03
CASC4-202ENST00000345795 LONRF3Q496Y0 759 aa15.27■□□□□ 0.03
CASC4-202ENST00000345795 ZFP91Q96JP5 570 aaPredicted RBP15.27■□□□□ 0.03
CASC4-202ENST00000345795 HOOK1Q9UJC3 728 aaKnown RBP15.27■□□□□ 0.03
CASC4-202ENST00000345795 ATP1A3P13637 1013 aa15.27■□□□□ 0.03
CASC4-202ENST00000345795 UBASH3AP57075 661 aa15.27■□□□□ 0.03
CASC4-202ENST00000345795 CBX1P83916 185 aa15.27■□□□□ 0.03
CASC4-202ENST00000345795 KCNH3Q9ULD8 1083 aa15.27■□□□□ 0.03
CASC4-202ENST00000345795 PCDHB6Q9Y5E3 794 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms