RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 HSPA4P34932 840 aa12.05□□□□□ -0.48
CAPRIN1-201ENST00000341394 MATR3P43243 847 aaKnown RBP eCLIP12.05□□□□□ -0.483e-12■□□□□ 11.2
CAPRIN1-201ENST00000341394 PHKA1P46020 1223 aa12.05□□□□□ -0.48
CAPRIN1-201ENST00000341394 Q6ZUG5 572 aa12.05□□□□□ -0.48
CAPRIN1-201ENST00000341394 FLAD1Q8NFF5 587 aa12.05□□□□□ -0.48
CAPRIN1-201ENST00000341394 C8orf76Q96K31 380 aa12.05□□□□□ -0.48
CAPRIN1-201ENST00000341394 TSPYL1Q9H0U9 437 aa12.05□□□□□ -0.48
CAPRIN1-201ENST00000341394 CARMIL3Q8ND23 1372 aa12.05□□□□□ -0.48
CAPRIN1-201ENST00000341394 MED23Q9ULK4 1368 aa12.05□□□□□ -0.48
CAPRIN1-201ENST00000341394 PLSCR1O15162 318 aa12.05□□□□□ -0.48
CAPRIN1-201ENST00000341394 CCDC102BQ68D86 513 aa12.05□□□□□ -0.48
CAPRIN1-201ENST00000341394 KBTBD3Q8NAB2 608 aa12.05□□□□□ -0.48
CAPRIN1-201ENST00000341394 ZNF622Q969S3 477 aaKnown RBP eCLIP12.05□□□□□ -0.484e-13■■□□□ 13
CAPRIN1-201ENST00000341394 ZNF219Q9P2Y4 722 aaPredicted RBP12.05□□□□□ -0.48
CAPRIN1-201ENST00000341394 SNX14Q9Y5W7 946 aa12.05□□□□□ -0.48
CAPRIN1-201ENST00000341394 BCAMP50895 628 aa12.05□□□□□ -0.48
CAPRIN1-201ENST00000341394 ZNF445P59923 1031 aa12.05□□□□□ -0.48
CAPRIN1-201ENST00000341394 ZNF827Q17R98 1081 aa12.05□□□□□ -0.48
CAPRIN1-201ENST00000341394 KIF4BQ2VIQ3 1234 aa12.05□□□□□ -0.48
CAPRIN1-201ENST00000341394 DEFB132Q7Z7B7 95 aa12.05□□□□□ -0.48
CAPRIN1-201ENST00000341394 ZBTB22O15209 634 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 DDIT3P35638 169 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 STX17P56962 302 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 SF3B3Q15393 1217 aaKnown RBP12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 CERS3Q8IU89 383 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 KLHL34Q8N239 644 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 PRIMPOLQ96LW4 560 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 ARAP2Q8WZ64 1704 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 ERICH2A1L162 156 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 GOLGA8BA8MQT2 603 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 MMP10P09238 476 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 TOP1P11387 765 aaKnown RBP12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 KLRK1P26718 216 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 GYG1P46976 350 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 PRR5LQ6MZQ0 368 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 LEKR1Q6ZMV7 388 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 COL23A1Q86Y22 540 aaPredicted RBP12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 NOL10Q9BSC4 688 aaKnown RBP12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 FTOQ9C0B1 505 aaKnown RBP eCLIP12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 IFNKQ9P0W0 207 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 MINDY4BA8MYZ0 360 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 ANKRD1Q15327 319 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 MCMDC2Q4G0Z9 681 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 ARHGAP29Q52LW3 1261 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 SLC9C2Q5TAH2 1124 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 PPFIBP1Q86W92 1011 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 GPATCH11Q8N954 259 aa12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 PUF60Q9UHX1 559 aaKnown RBP12.04□□□□□ -0.48
CAPRIN1-201ENST00000341394 LAMA4Q16363 1823 aa12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 C6orf229H3BNL8 230 aa12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 SLC3A2P08195 630 aaKnown RBP12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 GOLGA8FQ08AF8 430 aa12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 GOLGA8DPQ0D2H9 430 aa12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 SF3A3Q12874 501 aaKnown RBP eCLIP12.03□□□□□ -0.487e-8■■■□□ 14.7
CAPRIN1-201ENST00000341394 ZSCAN25Q6NSZ9 544 aa12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 NEK1Q96PY6 1258 aa12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 FAM107BQ9H098 131 aa12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 PPP1R1BQ9UD71 204 aaPredicted RBP12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 CCDC171Q6TFL3 1326 aa12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 FGFR2P21802 821 aa12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 ARID5BQ14865 1188 aa12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 GDAP1L1Q96MZ0 367 aa12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 ANKRD2Q9GZV1 360 aa12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 FOXP2O15409 715 aa12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 RNF113AO15541 343 aaKnown RBP12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 TTF1Q15361 905 aaPredicted RBP12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 DNAJC21Q5F1R6 531 aaKnown RBP12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 C10orf67Q8IYJ2 551 aa12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 RBM17Q96I25 401 aaKnown RBP12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 RUFY1Q96T51 708 aa12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 LZTFL1Q9NQ48 299 aa12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 ANO10Q9NW15 660 aa12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 BSDC1Q9NW68 430 aaPredicted RBP12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 MINPP1Q9UNW1 487 aa12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 JAG2Q9Y219 1238 aa12.03□□□□□ -0.48
CAPRIN1-201ENST00000341394 ERCC3P19447 782 aa12.02□□□□□ -0.48
CAPRIN1-201ENST00000341394 MAP3K12Q12852 859 aa12.02□□□□□ -0.48
CAPRIN1-201ENST00000341394 CBX8Q9HC52 389 aa12.02□□□□□ -0.48
CAPRIN1-201ENST00000341394 ORC3Q9UBD5 711 aaPredicted RBP12.02□□□□□ -0.48
CAPRIN1-201ENST00000341394 MCM5P33992 734 aa12.02□□□□□ -0.49
CAPRIN1-201ENST00000341394 AFMP43652 599 aa12.02□□□□□ -0.49
CAPRIN1-201ENST00000341394 NECTIN1Q15223 517 aa12.02□□□□□ -0.49
CAPRIN1-201ENST00000341394 SLC10A5Q5PT55 438 aa12.02□□□□□ -0.49
CAPRIN1-201ENST00000341394 DRC1Q96MC2 740 aa12.02□□□□□ -0.49
CAPRIN1-201ENST00000341394 ZHX3Q9H4I2 956 aa12.02□□□□□ -0.49
CAPRIN1-201ENST00000341394 CYP2E1P05181 493 aaPredicted RBP12.02□□□□□ -0.49
CAPRIN1-201ENST00000341394 LONRF3Q496Y0 759 aa12.02□□□□□ -0.49
CAPRIN1-201ENST00000341394 TNS1Q9HBL0 1735 aaKnown RBP12.02□□□□□ -0.49
CAPRIN1-201ENST00000341394 M0R2C6 588 aa12.01□□□□□ -0.49
CAPRIN1-201ENST00000341394 CREB3L3Q68CJ9 461 aa12.01□□□□□ -0.49
CAPRIN1-201ENST00000341394 SPATA5Q8NB90 893 aa12.01□□□□□ -0.49
CAPRIN1-201ENST00000341394 MYRIPQ8NFW9 859 aa12.01□□□□□ -0.49
CAPRIN1-201ENST00000341394 OSBP2Q969R2 916 aa12.01□□□□□ -0.49
CAPRIN1-201ENST00000341394 TM4SF1P30408 202 aa12.01□□□□□ -0.49
CAPRIN1-201ENST00000341394 CCDC12Q8WUD4 166 aaPredicted RBP12.01□□□□□ -0.49
CAPRIN1-201ENST00000341394 ANKRD20A12PQ8NF67 263 aa12.01□□□□□ -0.49
CAPRIN1-201ENST00000341394 MAP4K1Q92918 833 aa12.01□□□□□ -0.49
CAPRIN1-201ENST00000341394 AIDAQ96BJ3 306 aa12.01□□□□□ -0.49
CAPRIN1-201ENST00000341394 PPP1R9BQ96SB3 815 aa12.01□□□□□ -0.49
CAPRIN1-201ENST00000341394 LARGE1O95461 756 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms