RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 ALDH1A1P00352 501 aa13.85□□□□□ -0.19
MRPL55-203ENST00000336520 RRP1P56182 461 aaKnown RBP13.85□□□□□ -0.19
MRPL55-203ENST00000336520 RHBDL3P58872 404 aa13.85□□□□□ -0.19
MRPL55-203ENST00000336520 IFNL1Q8IU54 200 aa13.85□□□□□ -0.19
MRPL55-203ENST00000336520 TEX11Q8IYF3 940 aa13.85□□□□□ -0.19
MRPL55-203ENST00000336520 DDX4Q9NQI0 724 aaKnown RBP13.85□□□□□ -0.19
MRPL55-203ENST00000336520 SNCAIPQ9Y6H5 919 aa13.85□□□□□ -0.19
MRPL55-203ENST00000336520 SPDYE5A6NIY4 337 aa13.84□□□□□ -0.19
MRPL55-203ENST00000336520 PLCG2P16885 1265 aa13.84□□□□□ -0.19
MRPL55-203ENST00000336520 INPP5BP32019 993 aa13.84□□□□□ -0.19
MRPL55-203ENST00000336520 GTF2A2P52657 109 aa13.84□□□□□ -0.19
MRPL55-203ENST00000336520 OTUD7BQ6GQQ9 843 aa13.84□□□□□ -0.19
MRPL55-203ENST00000336520 ERO1BQ86YB8 467 aa13.84□□□□□ -0.19
MRPL55-203ENST00000336520 AATFQ9NY61 560 aaKnown RBP eCLIP13.84□□□□□ -0.19
MRPL55-203ENST00000336520 NDUFB9Q9Y6M9 179 aa13.84□□□□□ -0.19
MRPL55-203ENST00000336520 DOCK2Q92608 1830 aa13.84□□□□□ -0.19
MRPL55-203ENST00000336520 DDTLA6NHG4 134 aaPredicted RBP13.83□□□□□ -0.2
MRPL55-203ENST00000336520 IGF2BP3O00425 579 aaKnown RBP eCLIP13.83□□□□□ -0.2
MRPL55-203ENST00000336520 IGSF3O75054 1194 aa13.83□□□□□ -0.2
MRPL55-203ENST00000336520 CYP7A1P22680 504 aa13.83□□□□□ -0.2
MRPL55-203ENST00000336520 MAP3K12Q12852 859 aa13.83□□□□□ -0.2
MRPL55-203ENST00000336520 DGKZQ13574 1117 aa13.83□□□□□ -0.2
MRPL55-203ENST00000336520 SH3RF3Q8TEJ3 882 aaPredicted RBP13.83□□□□□ -0.2
MRPL55-203ENST00000336520 LRRCC1Q9C099 1032 aa13.83□□□□□ -0.2
MRPL55-203ENST00000336520 CCL15-CCL14A0A0B4J2E2 113 aa13.82□□□□□ -0.2
MRPL55-203ENST00000336520 NPM3O75607 178 aaKnown RBP13.82□□□□□ -0.2
MRPL55-203ENST00000336520 CCL15Q16663 113 aa13.82□□□□□ -0.2
MRPL55-203ENST00000336520 SH3BP5LQ7L8J4 393 aa13.82□□□□□ -0.2
MRPL55-203ENST00000336520 ADGRA1Q86SQ6 560 aa13.82□□□□□ -0.2
MRPL55-203ENST00000336520 MAGEB6Q8N7X4 407 aa13.82□□□□□ -0.2
MRPL55-203ENST00000336520 DNAJC2Q99543 621 aaKnown RBP13.82□□□□□ -0.2
MRPL55-203ENST00000336520 ZNF112Q9UJU3 913 aa13.82□□□□□ -0.2
MRPL55-203ENST00000336520 ATRNL1Q5VV63 1379 aa13.82□□□□□ -0.2
MRPL55-203ENST00000336520 MYO5AQ9Y4I1 1855 aaKnown RBP13.81□□□□□ -0.2
MRPL55-203ENST00000336520 TESPA1A2RU30 521 aaPredicted RBP13.81□□□□□ -0.2
MRPL55-203ENST00000336520 GPR25O00155 361 aa13.81□□□□□ -0.2
MRPL55-203ENST00000336520 CETPP11597 493 aa13.81□□□□□ -0.2
MRPL55-203ENST00000336520 PPP4CP60510 307 aa13.81□□□□□ -0.2
MRPL55-203ENST00000336520 PPIL2Q13356 520 aa13.81□□□□□ -0.2
MRPL55-203ENST00000336520 SNAPC2Q13487 334 aa13.81□□□□□ -0.2
MRPL55-203ENST00000336520 TTF1Q15361 905 aaPredicted RBP13.81□□□□□ -0.2
MRPL55-203ENST00000336520 ZNF296Q8WUU4 475 aaPredicted RBP13.81□□□□□ -0.2
MRPL55-203ENST00000336520 BRI3BPQ8WY22 251 aa13.81□□□□□ -0.2
MRPL55-203ENST00000336520 ABHD8Q96I13 439 aa13.81□□□□□ -0.2
MRPL55-203ENST00000336520 MS4A4AQ96JQ5 239 aa13.81□□□□□ -0.2
MRPL55-203ENST00000336520 CFHR5Q9BXR6 569 aa13.81□□□□□ -0.2
MRPL55-203ENST00000336520 MCOLN1Q9GZU1 580 aa13.81□□□□□ -0.2
MRPL55-203ENST00000336520 OSBPL5Q9H0X9 879 aaPredicted RBP13.81□□□□□ -0.2
MRPL55-203ENST00000336520 ANTXR1Q9H6X2 564 aa13.81□□□□□ -0.2
MRPL55-203ENST00000336520 PICK1Q9NRD5 415 aa13.81□□□□□ -0.2
MRPL55-203ENST00000336520 LAMB1P07942 1786 aa13.81□□□□□ -0.2
MRPL55-203ENST00000336520 GOLIM4O00461 696 aa13.8□□□□□ -0.2
MRPL55-203ENST00000336520 IRF6O14896 467 aa13.8□□□□□ -0.2
MRPL55-203ENST00000336520 SMARCA5O60264 1052 aaPredicted RBP13.8□□□□□ -0.2
MRPL55-203ENST00000336520 PPATQ06203 517 aa13.8□□□□□ -0.2
MRPL55-203ENST00000336520 NOM1Q5C9Z4 860 aaKnown RBP13.8□□□□□ -0.2
MRPL55-203ENST00000336520 NOL9Q5SY16 702 aaKnown RBP13.8□□□□□ -0.2
MRPL55-203ENST00000336520 MIGA1Q8NAN2 632 aa13.8□□□□□ -0.2
MRPL55-203ENST00000336520 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.8□□□□□ -0.2
MRPL55-203ENST00000336520 TGFBRAP1Q8WUH2 860 aa13.8□□□□□ -0.2
MRPL55-203ENST00000336520 PTPN18Q99952 460 aa13.8□□□□□ -0.2
MRPL55-203ENST00000336520 R3HDMLQ9H3Y0 253 aa13.8□□□□□ -0.2
MRPL55-203ENST00000336520 COL2A1P02458 1487 aaPredicted RBP13.8□□□□□ -0.2
MRPL55-203ENST00000336520 PHF20L1A8MW92 1017 aa13.79□□□□□ -0.2
MRPL55-203ENST00000336520 FKTNO75072 461 aa13.79□□□□□ -0.2
MRPL55-203ENST00000336520 DYNLL1P63167 89 aaKnown RBP13.79□□□□□ -0.2
MRPL55-203ENST00000336520 CRHR2Q13324 411 aa13.79□□□□□ -0.2
MRPL55-203ENST00000336520 TMED8Q6PL24 325 aaPredicted RBP13.79□□□□□ -0.2
MRPL55-203ENST00000336520 CTU1Q7Z7A3 348 aaKnown RBP13.79□□□□□ -0.2
MRPL55-203ENST00000336520 CERS3Q8IU89 383 aa13.79□□□□□ -0.2
MRPL55-203ENST00000336520 MAPKAPK5Q8IW41 473 aa13.79□□□□□ -0.2
MRPL55-203ENST00000336520 SCYL3Q8IZE3 742 aa13.79□□□□□ -0.2
MRPL55-203ENST00000336520 CRBNQ96SW2 442 aa13.79□□□□□ -0.2
MRPL55-203ENST00000336520 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.79□□□□□ -0.2
MRPL55-203ENST00000336520 FAM196BA6NMK8 535 aa13.78□□□□□ -0.2
MRPL55-203ENST00000336520 CTNND1O60716 968 aaKnown RBP13.78□□□□□ -0.2
MRPL55-203ENST00000336520 SLURP2P0DP57 97 aa13.78□□□□□ -0.2
MRPL55-203ENST00000336520 ATP5JP18859 108 aa13.78□□□□□ -0.2
MRPL55-203ENST00000336520 MAP3K10Q02779 954 aa13.78□□□□□ -0.2
MRPL55-203ENST00000336520 TAF1CQ15572 869 aaPredicted RBP13.78□□□□□ -0.2
MRPL55-203ENST00000336520 SLC9C2Q5TAH2 1124 aa13.78□□□□□ -0.2
MRPL55-203ENST00000336520 FAM43AQ8N2R8 423 aa13.78□□□□□ -0.2
MRPL55-203ENST00000336520 TRIM34Q9BYJ4 488 aa13.78□□□□□ -0.2
MRPL55-203ENST00000336520 DHX36Q9H2U1 1008 aaKnown RBP13.78□□□□□ -0.2
MRPL55-203ENST00000336520 BOLA2Q9H3K6 86 aa13.78□□□□□ -0.2
MRPL55-203ENST00000336520 DCTPP1Q9H773 170 aa13.78□□□□□ -0.2
MRPL55-203ENST00000336520 PCDHB15Q9Y5E8 787 aa13.78□□□□□ -0.2
MRPL55-203ENST00000336520 FLT1P17948 1338 aa13.78□□□□□ -0.2
MRPL55-203ENST00000336520 TBC1D12O60347 775 aa13.77□□□□□ -0.21
MRPL55-203ENST00000336520 PDE6AP16499 860 aa13.77□□□□□ -0.21
MRPL55-203ENST00000336520 USP5P45974 858 aa13.77□□□□□ -0.21
MRPL55-203ENST00000336520 GPATCH3Q96I76 525 aa13.77□□□□□ -0.21
MRPL55-203ENST00000336520 ZFYVE28Q9HCC9 887 aa13.77□□□□□ -0.21
MRPL55-203ENST00000336520 PAG1Q9NWQ8 432 aa13.77□□□□□ -0.21
MRPL55-203ENST00000336520 SAP30BPQ9UHR5 308 aaKnown RBP13.77□□□□□ -0.21
MRPL55-203ENST00000336520 HERC5Q9UII4 1024 aaKnown RBP13.77□□□□□ -0.21
MRPL55-203ENST00000336520 ZHX2Q9Y6X8 837 aa13.77□□□□□ -0.21
MRPL55-203ENST00000336520 CCDC85CA6NKD9 419 aa13.76□□□□□ -0.21
MRPL55-203ENST00000336520 BTBD19C9JJ37 291 aa13.76□□□□□ -0.21
MRPL55-203ENST00000336520 HLA-DOAP06340 250 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms