RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 MINDY4BA8MYZ0 360 aa20.93■□□□□ 0.94
RAB39A-201ENST00000320578 ORC4O43929 436 aa20.93■□□□□ 0.94
RAB39A-201ENST00000320578 SLC3A2P08195 630 aaKnown RBP20.93■□□□□ 0.94
RAB39A-201ENST00000320578 TMEM67Q5HYA8 995 aa20.93■□□□□ 0.94
RAB39A-201ENST00000320578 FAM184AQ8NB25 1140 aa20.93■□□□□ 0.94
RAB39A-201ENST00000320578 C10orf71Q711Q0 1435 aa20.93■□□□□ 0.94
RAB39A-201ENST00000320578 USP17L12C9JPN9 530 aa20.92■□□□□ 0.94
RAB39A-201ENST00000320578 USP17L21D6R901 530 aa20.92■□□□□ 0.94
RAB39A-201ENST00000320578 CCT2P78371 535 aaKnown RBP20.92■□□□□ 0.94
RAB39A-201ENST00000320578 NKX2-3Q8TAU0 364 aa20.92■□□□□ 0.94
RAB39A-201ENST00000320578 C7orf43Q8WVR3 580 aa20.92■□□□□ 0.94
RAB39A-201ENST00000320578 CHD4Q14839 1912 aa20.92■□□□□ 0.94
RAB39A-201ENST00000320578 IFIT3O14879 490 aaKnown RBP20.92■□□□□ 0.94
RAB39A-201ENST00000320578 GRIK5Q16478 980 aa20.92■□□□□ 0.94
RAB39A-201ENST00000320578 APOA5Q6Q788 366 aa20.92■□□□□ 0.94
RAB39A-201ENST00000320578 PODNQ7Z5L7 613 aa20.92■□□□□ 0.94
RAB39A-201ENST00000320578 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.92■□□□□ 0.94
RAB39A-201ENST00000320578 VPS37CA5D8V6 355 aaPredicted RBP20.91■□□□□ 0.94
RAB39A-201ENST00000320578 PRPF40AO75400 957 aaKnown RBP20.91■□□□□ 0.94
RAB39A-201ENST00000320578 FKBP1AP62942 108 aaKnown RBP20.91■□□□□ 0.94
RAB39A-201ENST00000320578 CSPP1Q1MSJ5 1256 aa20.91■□□□□ 0.94
RAB39A-201ENST00000320578 INCENPQ9NQS7 918 aa20.91■□□□□ 0.94
RAB39A-201ENST00000320578 ERICH2A1L162 156 aa20.9■□□□□ 0.94
RAB39A-201ENST00000320578 CDKL5O76039 1030 aa20.9■□□□□ 0.94
RAB39A-201ENST00000320578 ZSCAN16Q9H4T2 348 aaPredicted RBP20.9■□□□□ 0.94
RAB39A-201ENST00000320578 NCOA5Q9HCD5 579 aaKnown RBP20.9■□□□□ 0.94
RAB39A-201ENST00000320578 NAP1L2Q9ULW6 460 aaPredicted RBP20.9■□□□□ 0.94
RAB39A-201ENST00000320578 DDX49Q9Y6V7 483 aaKnown RBP20.9■□□□□ 0.94
RAB39A-201ENST00000320578 RIMBP2O15034 1052 aa20.9■□□□□ 0.94
RAB39A-201ENST00000320578 MBD3O95983 291 aa20.9■□□□□ 0.94
RAB39A-201ENST00000320578 GTF2IP78347 998 aa20.9■□□□□ 0.94
RAB39A-201ENST00000320578 DIXDC1Q155Q3 683 aa20.9■□□□□ 0.94
RAB39A-201ENST00000320578 CPLX2Q6PUV4 134 aaKnown RBP20.9■□□□□ 0.94
RAB39A-201ENST00000320578 ZBTB43O43298 467 aa20.89■□□□□ 0.93
RAB39A-201ENST00000320578 METAP2P50579 478 aaKnown RBP eCLIP20.89■□□□□ 0.93
RAB39A-201ENST00000320578 WTAPQ15007 396 aa20.89■□□□□ 0.93
RAB39A-201ENST00000320578 PPP2R5BQ15173 497 aa20.89■□□□□ 0.93
RAB39A-201ENST00000320578 SYNE3Q6ZMZ3 975 aa20.89■□□□□ 0.93
RAB39A-201ENST00000320578 CDC37L1Q7L3B6 337 aa20.89■□□□□ 0.93
RAB39A-201ENST00000320578 ROBO3Q96MS0 1386 aa20.89■□□□□ 0.93
RAB39A-201ENST00000320578 SNED1Q8TER0 1413 aa20.88■□□□□ 0.93
RAB39A-201ENST00000320578 CCDC69A6NI79 296 aa20.88■□□□□ 0.93
RAB39A-201ENST00000320578 CPLX1O14810 134 aa20.88■□□□□ 0.93
RAB39A-201ENST00000320578 USP5P45974 858 aa20.88■□□□□ 0.93
RAB39A-201ENST00000320578 PDE4BQ07343 736 aa20.88■□□□□ 0.93
RAB39A-201ENST00000320578 RRP12Q5JTH9 1297 aaKnown RBP20.88■□□□□ 0.93
RAB39A-201ENST00000320578 C12orf60Q5U649 245 aa20.88■□□□□ 0.93
RAB39A-201ENST00000320578 OLFM4Q6UX06 510 aa20.88■□□□□ 0.93
RAB39A-201ENST00000320578 SUPT20HQ8NEM7 779 aa20.88■□□□□ 0.93
RAB39A-201ENST00000320578 SH3RF3Q8TEJ3 882 aaPredicted RBP20.88■□□□□ 0.93
RAB39A-201ENST00000320578 DDX11Q96FC9 970 aa20.88■□□□□ 0.93
RAB39A-201ENST00000320578 UBAC1Q9BSL1 405 aa20.88■□□□□ 0.93
RAB39A-201ENST00000320578 MRIQ9BWK5 157 aa20.88■□□□□ 0.93
RAB39A-201ENST00000320578 TOMM22Q9NS69 142 aa20.88■□□□□ 0.93
RAB39A-201ENST00000320578 SLC12A7Q9Y666 1083 aa20.88■□□□□ 0.93
RAB39A-201ENST00000320578 H3BQV1 296 aa20.88■□□□□ 0.93
RAB39A-201ENST00000320578 FDPSP14324 419 aaKnown RBP20.88■□□□□ 0.93
RAB39A-201ENST00000320578 CHRNA5P30532 468 aa20.88■□□□□ 0.93
RAB39A-201ENST00000320578 BTDP43251 543 aa20.88■□□□□ 0.93
RAB39A-201ENST00000320578 SEC23AQ15436 765 aa20.88■□□□□ 0.93
RAB39A-201ENST00000320578 IFFO2Q5TF58 517 aa20.88■□□□□ 0.93
RAB39A-201ENST00000320578 NFXL1Q6ZNB6 911 aa20.88■□□□□ 0.93
RAB39A-201ENST00000320578 AMOTL1Q8IY63 956 aa20.88■□□□□ 0.93
RAB39A-201ENST00000320578 MCM9Q9NXL9 1143 aa20.87■□□□□ 0.93
RAB39A-201ENST00000320578 G3V3G9 751 aa20.86■□□□□ 0.93
RAB39A-201ENST00000320578 DEKP35659 375 aaKnown RBP20.86■□□□□ 0.93
RAB39A-201ENST00000320578 DCAF8Q5TAQ9 597 aa20.86■□□□□ 0.93
RAB39A-201ENST00000320578 IQCA1Q86XH1 822 aa20.86■□□□□ 0.93
RAB39A-201ENST00000320578 ISY1Q9ULR0 285 aaKnown RBP20.86■□□□□ 0.93
RAB39A-201ENST00000320578 LAMB1P07942 1786 aa20.86■□□□□ 0.93
RAB39A-201ENST00000320578 SLX4Q8IY92 1834 aa20.86■□□□□ 0.93
RAB39A-201ENST00000320578 CYP2D7A0A087X1C5 515 aa20.85■□□□□ 0.93
RAB39A-201ENST00000320578 RHBDL3P58872 404 aa20.85■□□□□ 0.93
RAB39A-201ENST00000320578 USP48Q86UV5 1035 aa20.85■□□□□ 0.93
RAB39A-201ENST00000320578 ZSCAN10Q96SZ4 725 aaPredicted RBP20.85■□□□□ 0.93
RAB39A-201ENST00000320578 SENP2Q9HC62 589 aa20.85■□□□□ 0.93
RAB39A-201ENST00000320578 CCDC196A0A1B0GTZ2 297 aa20.85■□□□□ 0.93
RAB39A-201ENST00000320578 GOLGA8AA7E2F4 631 aa20.85■□□□□ 0.93
RAB39A-201ENST00000320578 RESTQ13127 1097 aa20.85■□□□□ 0.93
RAB39A-201ENST00000320578 STRIP1Q5VSL9 837 aa20.85■□□□□ 0.93
RAB39A-201ENST00000320578 HHIPL2Q6UWX4 724 aa20.85■□□□□ 0.93
RAB39A-201ENST00000320578 CHAMP1Q96JM3 812 aa20.85■□□□□ 0.93
RAB39A-201ENST00000320578 ORC3Q9UBD5 711 aaPredicted RBP20.85■□□□□ 0.93
RAB39A-201ENST00000320578 MYH2Q9UKX2 1941 aa20.85■□□□□ 0.93
RAB39A-201ENST00000320578 BAZ2AQ9UIF9 1905 aaKnown RBP20.84■□□□□ 0.93
RAB39A-201ENST00000320578 STK36Q9NRP7 1315 aa20.84■□□□□ 0.93
RAB39A-201ENST00000320578 NCLP19338 710 aaKnown RBP20.84■□□□□ 0.93
RAB39A-201ENST00000320578 KRT85P78386 507 aa20.84■□□□□ 0.93
RAB39A-201ENST00000320578 NTRK3Q16288 839 aa20.84■□□□□ 0.93
RAB39A-201ENST00000320578 CCDC178Q5BJE1 867 aa20.84■□□□□ 0.93
RAB39A-201ENST00000320578 ATL3Q6DD88 541 aa20.84■□□□□ 0.93
RAB39A-201ENST00000320578 PDGFDQ9GZP0 370 aaPredicted RBP20.84■□□□□ 0.93
RAB39A-201ENST00000320578 FAM217BQ9NTX9 383 aaPredicted RBP20.84■□□□□ 0.93
RAB39A-201ENST00000320578 TNKSO95271 1327 aa20.83■□□□□ 0.93
RAB39A-201ENST00000320578 DTNBO60941 627 aa20.83■□□□□ 0.93
RAB39A-201ENST00000320578 DNM1Q05193 864 aaKnown RBP20.83■□□□□ 0.93
RAB39A-201ENST00000320578 KIAA2012Q0VF49 1180 aa20.83■□□□□ 0.93
RAB39A-201ENST00000320578 DOK7Q18PE1 504 aa20.83■□□□□ 0.93
RAB39A-201ENST00000320578 TEX11Q8IYF3 940 aa20.83■□□□□ 0.93
RAB39A-201ENST00000320578 CERS5Q8N5B7 392 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms