RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 VPS33BQ9H267 617 aa14.88□□□□□ -0.03
PTPN6-201ENST00000318974 RBM27Q9P2N5 1060 aaKnown RBP14.88□□□□□ -0.03
PTPN6-201ENST00000318974 CCDC88AQ3V6T2 1871 aa14.87□□□□□ -0.03
PTPN6-201ENST00000318974 GAKO14976 1311 aa14.87□□□□□ -0.03
PTPN6-201ENST00000318974 BTDP43251 543 aa14.87□□□□□ -0.03
PTPN6-201ENST00000318974 CCDC83Q8IWF9 413 aa14.87□□□□□ -0.03
PTPN6-201ENST00000318974 GPR75-ASB3A0A0A6YYF3 556 aa14.86□□□□□ -0.03
PTPN6-201ENST00000318974 USP17L3A6NCW0 530 aa14.86□□□□□ -0.03
PTPN6-201ENST00000318974 USP17L4A6NCW7 530 aa14.86□□□□□ -0.03
PTPN6-201ENST00000318974 FGD1P98174 961 aa14.86□□□□□ -0.03
PTPN6-201ENST00000318974 CTDSPL2Q05D32 466 aa14.86□□□□□ -0.03
PTPN6-201ENST00000318974 PPARAQ07869 468 aa14.86□□□□□ -0.03
PTPN6-201ENST00000318974 USP17L1Q7RTZ2 530 aa14.86□□□□□ -0.03
PTPN6-201ENST00000318974 MB21D2Q8IYB1 491 aaPredicted RBP14.86□□□□□ -0.03
PTPN6-201ENST00000318974 MXD3Q9BW11 206 aa14.86□□□□□ -0.03
PTPN6-201ENST00000318974 DCP1AQ9NPI6 582 aaPredicted RBP14.86□□□□□ -0.03
PTPN6-201ENST00000318974 KCNQ5Q9NR82 932 aa14.86□□□□□ -0.03
PTPN6-201ENST00000318974 F8W031 263 aaPredicted RBP14.86□□□□□ -0.03
PTPN6-201ENST00000318974 F13A1P00488 732 aa14.86□□□□□ -0.03
PTPN6-201ENST00000318974 GJB2P29033 226 aa14.86□□□□□ -0.03
PTPN6-201ENST00000318974 MCM5P33992 734 aa14.86□□□□□ -0.03
PTPN6-201ENST00000318974 ME3Q16798 604 aa14.86□□□□□ -0.03
PTPN6-201ENST00000318974 AKNAD1Q5T1N1 836 aa14.86□□□□□ -0.03
PTPN6-201ENST00000318974 SH3RF3Q8TEJ3 882 aaPredicted RBP14.86□□□□□ -0.03
PTPN6-201ENST00000318974 SPON1Q9HCB6 807 aa14.86□□□□□ -0.03
PTPN6-201ENST00000318974 ANAPC4Q9UJX5 808 aa14.86□□□□□ -0.03
PTPN6-201ENST00000318974 TPCN1Q9ULQ1 816 aa14.86□□□□□ -0.03
PTPN6-201ENST00000318974 TTF2Q9UNY4 1162 aaKnown RBP14.86□□□□□ -0.03
PTPN6-201ENST00000318974 MINDY4BA8MYZ0 360 aa14.85□□□□□ -0.03
PTPN6-201ENST00000318974 PLCG2P16885 1265 aa14.85□□□□□ -0.03
PTPN6-201ENST00000318974 USP5P45974 858 aa14.85□□□□□ -0.03
PTPN6-201ENST00000318974 DACT2Q5SW24 774 aa14.85□□□□□ -0.03
PTPN6-201ENST00000318974 USP48Q86UV5 1035 aa14.85□□□□□ -0.03
PTPN6-201ENST00000318974 LARGE2Q8N3Y3 721 aa14.85□□□□□ -0.03
PTPN6-201ENST00000318974 STAG1Q8WVM7 1258 aa14.85□□□□□ -0.03
PTPN6-201ENST00000318974 LRRC2Q9BYS8 371 aa14.85□□□□□ -0.03
PTPN6-201ENST00000318974 RNF41Q9H4P4 317 aaPredicted RBP14.85□□□□□ -0.03
PTPN6-201ENST00000318974 CTR9Q6PD62 1173 aa14.85□□□□□ -0.03
PTPN6-201ENST00000318974 MFSD6Q6ZSS7 791 aa14.85□□□□□ -0.03
PTPN6-201ENST00000318974 AGXT2Q9BYV1 514 aa14.85□□□□□ -0.03
PTPN6-201ENST00000318974 CNNM2Q9H8M5 875 aa14.85□□□□□ -0.03
PTPN6-201ENST00000318974 ZNF277Q9NRM2 450 aaPredicted RBP14.85□□□□□ -0.03
PTPN6-201ENST00000318974 WDR19Q8NEZ3 1342 aa14.84□□□□□ -0.03
PTPN6-201ENST00000318974 SYCE3A1L190 88 aa14.84□□□□□ -0.03
PTPN6-201ENST00000318974 USP17L12C9JPN9 530 aa14.84□□□□□ -0.03
PTPN6-201ENST00000318974 USP17L21D6R901 530 aa14.84□□□□□ -0.03
PTPN6-201ENST00000318974 PRC1O43663 620 aa14.84□□□□□ -0.03
PTPN6-201ENST00000318974 CLCN1P35523 988 aa14.84□□□□□ -0.03
PTPN6-201ENST00000318974 CHST3Q7LGC8 479 aa14.84□□□□□ -0.03
PTPN6-201ENST00000318974 BRF1Q92994 677 aa14.84□□□□□ -0.03
PTPN6-201ENST00000318974 KRT23Q9C075 422 aa14.84□□□□□ -0.03
PTPN6-201ENST00000318974 RBSNQ9H1K0 784 aa14.84□□□□□ -0.03
PTPN6-201ENST00000318974 ARPP21Q9UBL0 812 aaPredicted RBP14.84□□□□□ -0.03
PTPN6-201ENST00000318974 BCS1LQ9Y276 419 aa14.84□□□□□ -0.03
PTPN6-201ENST00000318974 DAGLAQ9Y4D2 1042 aa14.84□□□□□ -0.03
PTPN6-201ENST00000318974 CHD4Q14839 1912 aa14.84□□□□□ -0.03
PTPN6-201ENST00000318974 NEDD4P46934 1319 aa14.84□□□□□ -0.03
PTPN6-201ENST00000318974 YDJCA8MPS7 323 aa14.84□□□□□ -0.03
PTPN6-201ENST00000318974 B4E1Z4 1266 aa14.84□□□□□ -0.03
PTPN6-201ENST00000318974 ST3GAL1Q11201 340 aa14.84□□□□□ -0.03
PTPN6-201ENST00000318974 SBK1Q52WX2 424 aa14.84□□□□□ -0.03
PTPN6-201ENST00000318974 FBXL16Q8N461 479 aa14.84□□□□□ -0.03
PTPN6-201ENST00000318974 TIAM2Q8IVF5 1701 aa14.83□□□□□ -0.03
PTPN6-201ENST00000318974 LAMA4Q16363 1823 aa14.83□□□□□ -0.04
PTPN6-201ENST00000318974 ESPNB1AK53 854 aa14.83□□□□□ -0.04
PTPN6-201ENST00000318974 IARSP41252 1262 aaKnown RBP14.83□□□□□ -0.04
PTPN6-201ENST00000318974 ANTXR2P58335 489 aa14.83□□□□□ -0.04
PTPN6-201ENST00000318974 CSPP1Q1MSJ5 1256 aa14.83□□□□□ -0.04
PTPN6-201ENST00000318974 HHIPL2Q6UWX4 724 aa14.83□□□□□ -0.04
PTPN6-201ENST00000318974 TEX11Q8IYF3 940 aa14.83□□□□□ -0.04
PTPN6-201ENST00000318974 TGFBRAP1Q8WUH2 860 aa14.83□□□□□ -0.04
PTPN6-201ENST00000318974 TEKT1Q969V4 418 aa14.83□□□□□ -0.04
PTPN6-201ENST00000318974 MKRN1Q9UHC7 482 aaKnown RBP14.83□□□□□ -0.04
PTPN6-201ENST00000318974 MTMR6Q9Y217 621 aa14.83□□□□□ -0.04
PTPN6-201ENST00000318974 CYP2D7A0A087X1C5 515 aa14.82□□□□□ -0.04
PTPN6-201ENST00000318974 PDCP20941 246 aa14.82□□□□□ -0.04
PTPN6-201ENST00000318974 RHBDL3P58872 404 aa14.82□□□□□ -0.04
PTPN6-201ENST00000318974 FOXD4L6Q3SYB3 417 aaPredicted RBP14.82□□□□□ -0.04
PTPN6-201ENST00000318974 FOXD4L3Q6VB84 417 aaPredicted RBP14.82□□□□□ -0.04
PTPN6-201ENST00000318974 MRIQ9BWK5 157 aa14.82□□□□□ -0.04
PTPN6-201ENST00000318974 TAOK3Q9H2K8 898 aa14.82□□□□□ -0.04
PTPN6-201ENST00000318974 GDPD2Q9HCC8 539 aa14.82□□□□□ -0.04
PTPN6-201ENST00000318974 INCENPQ9NQS7 918 aa14.82□□□□□ -0.04
PTPN6-201ENST00000318974 TACC3Q9Y6A5 838 aa14.82□□□□□ -0.04
PTPN6-201ENST00000318974 GADD45BO75293 160 aaPredicted RBP14.82□□□□□ -0.04
PTPN6-201ENST00000318974 PCP11498 1178 aaKnown RBP14.82□□□□□ -0.04
PTPN6-201ENST00000318974 SCNN1DP51172 638 aa14.82□□□□□ -0.04
PTPN6-201ENST00000318974 ILDR2Q71H61 639 aa14.82□□□□□ -0.04
PTPN6-201ENST00000318974 CYB5R4Q7L1T6 521 aa14.82□□□□□ -0.04
PTPN6-201ENST00000318974 KIAA0825Q8IV33 1275 aa14.82□□□□□ -0.04
PTPN6-201ENST00000318974 NIM1KQ8IY84 436 aa14.82□□□□□ -0.04
PTPN6-201ENST00000318974 STK11IPQ8N1F8 1099 aa14.82□□□□□ -0.04
PTPN6-201ENST00000318974 TOMM22Q9NS69 142 aa14.82□□□□□ -0.04
PTPN6-201ENST00000318974 MCM9Q9NXL9 1143 aa14.82□□□□□ -0.04
PTPN6-201ENST00000318974 CRKP46108 304 aa14.81□□□□□ -0.04
PTPN6-201ENST00000318974 UBE2HP62256 183 aa14.81□□□□□ -0.04
PTPN6-201ENST00000318974 HDLBPQ00341 1268 aaKnown RBP14.81□□□□□ -0.04
PTPN6-201ENST00000318974 RRP12Q5JTH9 1297 aaKnown RBP14.81□□□□□ -0.04
PTPN6-201ENST00000318974 AMOTL1Q8IY63 956 aa14.81□□□□□ -0.04
PTPN6-201ENST00000318974 NLGN2Q8NFZ4 835 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms