RNA–Protein interactions for RNA: ENST00000312734.8

CGREF1-202, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CGREF1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-202ENST00000312734 SCAF8Q9UPN6 1271 aaKnown RBP32.51■■■□□ 2.79
CGREF1-202ENST00000312734 NECTIN1Q15223 517 aa32.5■■■□□ 2.79
CGREF1-202ENST00000312734 RRAGCQ9HB90 399 aa32.5■■■□□ 2.79
CGREF1-202ENST00000312734 USP17L12C9JPN9 530 aa32.49■■■□□ 2.79
CGREF1-202ENST00000312734 USP17L21D6R901 530 aa32.49■■■□□ 2.79
CGREF1-202ENST00000312734 EPB41L2O43491 1005 aaKnown RBP32.49■■■□□ 2.79
CGREF1-202ENST00000312734 ZFPM1Q8IX07 1006 aa32.49■■■□□ 2.79
CGREF1-202ENST00000312734 C22orf23Q9BZE7 217 aa32.49■■■□□ 2.79
CGREF1-202ENST00000312734 MINDY4BA8MYZ0 360 aa32.48■■■□□ 2.79
CGREF1-202ENST00000312734 HAND2P61296 217 aa32.48■■■□□ 2.79
CGREF1-202ENST00000312734 CTR9Q6PD62 1173 aa32.48■■■□□ 2.79
CGREF1-202ENST00000312734 TAF1DQ9H5J8 278 aaPredicted RBP32.48■■■□□ 2.79
CGREF1-202ENST00000312734 ECM29Q5VYK3 1845 aa32.48■■■□□ 2.79
CGREF1-202ENST00000312734 CYP2D7A0A087X1C5 515 aa32.48■■■□□ 2.79
CGREF1-202ENST00000312734 ANGEL2Q5VTE6 544 aaKnown RBP32.48■■■□□ 2.79
CGREF1-202ENST00000312734 PALD1Q9ULE6 856 aa32.48■■■□□ 2.79
CGREF1-202ENST00000312734 CDK5RAP2Q96SN8 1893 aa32.47■■■□□ 2.79
CGREF1-202ENST00000312734 MCCP23508 829 aa32.47■■■□□ 2.79
CGREF1-202ENST00000312734 HSPA4P34932 840 aa32.47■■■□□ 2.79
CGREF1-202ENST00000312734 CREB3L3Q68CJ9 461 aa32.47■■■□□ 2.79
CGREF1-202ENST00000312734 OSBPL5Q9H0X9 879 aaPredicted RBP32.47■■■□□ 2.79
CGREF1-202ENST00000312734 WDR90Q96KV7 1748 aa32.46■■■□□ 2.79
CGREF1-202ENST00000312734 ZNF213O14771 459 aa32.46■■■□□ 2.79
CGREF1-202ENST00000312734 SLC27A2O14975 620 aa32.46■■■□□ 2.79
CGREF1-202ENST00000312734 POLR3DP05423 398 aaPredicted RBP32.46■■■□□ 2.79
CGREF1-202ENST00000312734 CYP2D6P10635 497 aa32.46■■■□□ 2.79
CGREF1-202ENST00000312734 EAPPQ56P03 285 aaPredicted RBP32.46■■■□□ 2.79
CGREF1-202ENST00000312734 USP50Q70EL3 339 aaPredicted RBP32.46■■■□□ 2.79
CGREF1-202ENST00000312734 CYP21A2P08686 494 aa32.45■■■□□ 2.79
CGREF1-202ENST00000312734 EVX2Q03828 476 aa32.45■■■□□ 2.79
CGREF1-202ENST00000312734 IMMTQ16891 758 aaKnown RBP32.45■■■□□ 2.79
CGREF1-202ENST00000312734 STK11IPQ8N1F8 1099 aa32.45■■■□□ 2.79
CGREF1-202ENST00000312734 GGA3Q9NZ52 723 aa32.45■■■□□ 2.79
CGREF1-202ENST00000312734 ZMYM6O95789 1325 aa32.45■■■□□ 2.79
CGREF1-202ENST00000312734 BAZ2AQ9UIF9 1905 aaKnown RBP32.45■■■□□ 2.79
CGREF1-202ENST00000312734 SMIM22K7EJ46 135 aa32.44■■■□□ 2.78
CGREF1-202ENST00000312734 ENTPD3O75355 529 aa32.44■■■□□ 2.78
CGREF1-202ENST00000312734 ARPP21Q9UBL0 812 aaPredicted RBP32.44■■■□□ 2.78
CGREF1-202ENST00000312734 NPM3O75607 178 aaKnown RBP32.44■■■□□ 2.78
CGREF1-202ENST00000312734 ZSCAN29Q8IWY8 852 aaPredicted RBP32.44■■■□□ 2.78
CGREF1-202ENST00000312734 SCN4AP35499 1836 aa32.43■■■□□ 2.78
CGREF1-202ENST00000312734 VEGFAP15692 232 aaPredicted RBP32.43■■■□□ 2.78
CGREF1-202ENST00000312734 RNF20Q5VTR2 975 aa32.43■■■□□ 2.78
CGREF1-202ENST00000312734 FKBP1CQ5VVH2 108 aa32.43■■■□□ 2.78
CGREF1-202ENST00000312734 AMOTL1Q8IY63 956 aa32.43■■■□□ 2.78
CGREF1-202ENST00000312734 RASEFQ8IZ41 740 aa32.43■■■□□ 2.78
CGREF1-202ENST00000312734 TAF6LQ9Y6J9 622 aa32.43■■■□□ 2.78
CGREF1-202ENST00000312734 PLCD1P51178 756 aa32.42■■■□□ 2.78
CGREF1-202ENST00000312734 CTDSPL2Q05D32 466 aa32.42■■■□□ 2.78
CGREF1-202ENST00000312734 PPARAQ07869 468 aa32.42■■■□□ 2.78
CGREF1-202ENST00000312734 SBK1Q52WX2 424 aa32.42■■■□□ 2.78
CGREF1-202ENST00000312734 NMRK2Q9NPI5 230 aa32.42■■■□□ 2.78
CGREF1-202ENST00000312734 CNTNAP1P78357 1384 aa32.42■■■□□ 2.78
CGREF1-202ENST00000312734 DDTLA6NHG4 134 aaPredicted RBP32.41■■■□□ 2.78
CGREF1-202ENST00000312734 TNNI2P48788 182 aa32.41■■■□□ 2.78
CGREF1-202ENST00000312734 C12orf60Q5U649 245 aa32.41■■■□□ 2.78
CGREF1-202ENST00000312734 FOCADQ5VW36 1801 aa32.41■■■□□ 2.78
CGREF1-202ENST00000312734 NAV1Q8NEY1 1877 aa32.41■■■□□ 2.78
CGREF1-202ENST00000312734 FAM151AQ8WW52 585 aa32.41■■■□□ 2.78
CGREF1-202ENST00000312734 TNFAIP1Q13829 316 aa32.4■■■□□ 2.78
CGREF1-202ENST00000312734 RASA3Q14644 834 aa32.4■■■□□ 2.78
CGREF1-202ENST00000312734 SH3BP5LQ7L8J4 393 aa32.4■■■□□ 2.78
CGREF1-202ENST00000312734 FAM83AQ86UY5 434 aa32.4■■■□□ 2.78
CGREF1-202ENST00000312734 PNMA8AQ86V59 439 aaPredicted RBP32.4■■■□□ 2.78
CGREF1-202ENST00000312734 TBC1D32Q96NH3 1257 aa32.4■■■□□ 2.78
CGREF1-202ENST00000312734 TMEM39BQ9GZU3 492 aa32.4■■■□□ 2.78
CGREF1-202ENST00000312734 ZKSCAN1P17029 563 aaPredicted RBP32.4■■■□□ 2.78
CGREF1-202ENST00000312734 SNX14Q9Y5W7 946 aa32.4■■■□□ 2.78
CGREF1-202ENST00000312734 TTC6Q86TZ1 520 aa32.39■■■□□ 2.78
CGREF1-202ENST00000312734 APOBEC3FQ8IUX4 373 aaKnown RBP32.39■■■□□ 2.78
CGREF1-202ENST00000312734 DCPSQ96C86 337 aaKnown RBP32.39■■■□□ 2.78
CGREF1-202ENST00000312734 NBPF3Q9H094 633 aa32.39■■■□□ 2.78
CGREF1-202ENST00000312734 CLEC11AQ9Y240 323 aa32.39■■■□□ 2.78
CGREF1-202ENST00000312734 RBM25P49756 843 aaKnown RBP32.38■■■□□ 2.77
CGREF1-202ENST00000312734 DEFB129Q9H1M3 183 aa32.38■■■□□ 2.77
CGREF1-202ENST00000312734 INCENPQ9NQS7 918 aa32.38■■■□□ 2.77
CGREF1-202ENST00000312734 MYH1P12882 1939 aa32.38■■■□□ 2.77
CGREF1-202ENST00000312734 KCNB2Q92953 911 aa32.37■■■□□ 2.77
CGREF1-202ENST00000312734 DYNLL2Q96FJ2 89 aa32.37■■■□□ 2.77
CGREF1-202ENST00000312734 DHX36Q9H2U1 1008 aaKnown RBP32.37■■■□□ 2.77
CGREF1-202ENST00000312734 HLA-DOAP06340 250 aa32.37■■■□□ 2.77
CGREF1-202ENST00000312734 TBC1D10CQ8IV04 446 aa32.37■■■□□ 2.77
CGREF1-202ENST00000312734 POTEIP0CG38 1075 aa32.36■■■□□ 2.77
CGREF1-202ENST00000312734 POTEJP0CG39 1038 aa32.36■■■□□ 2.77
CGREF1-202ENST00000312734 CDAN1Q8IWY9 1227 aa32.36■■■□□ 2.77
CGREF1-202ENST00000312734 ZC3H15Q8WU90 426 aaKnown RBP32.36■■■□□ 2.77
CGREF1-202ENST00000312734 ANAPC4Q9UJX5 808 aa32.36■■■□□ 2.77
CGREF1-202ENST00000312734 CSRNP1Q96S65 589 aa32.35■■■□□ 2.77
CGREF1-202ENST00000312734 TACC3Q9Y6A5 838 aa32.35■■■□□ 2.77
CGREF1-202ENST00000312734 PITPNM2Q9BZ72 1349 aa32.34■■■□□ 2.77
CGREF1-202ENST00000312734 E7EWF7 191 aa32.34■■■□□ 2.77
CGREF1-202ENST00000312734 SLURP2P0DP57 97 aa32.34■■■□□ 2.77
CGREF1-202ENST00000312734 PRAMEF18Q5VWM3 479 aa32.34■■■□□ 2.77
CGREF1-202ENST00000312734 STOX1Q6ZVD7 989 aa32.34■■■□□ 2.77
CGREF1-202ENST00000312734 PI4KBQ9UBF8 816 aa32.34■■■□□ 2.77
CGREF1-202ENST00000312734 DDX60LQ5H9U9 1706 aaKnown RBP32.34■■■□□ 2.77
CGREF1-202ENST00000312734 SLC3A2P08195 630 aaKnown RBP32.33■■■□□ 2.77
CGREF1-202ENST00000312734 ADCK5Q3MIX3 580 aa32.33■■■□□ 2.77
CGREF1-202ENST00000312734 PGAP2Q9UHJ9 254 aa32.33■■■□□ 2.77
CGREF1-202ENST00000312734 TSGA10IPQ3SY00 556 aa32.33■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms