RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 BRAPQ7Z569 592 aa19.24■□□□□ 0.67
TVP23B-201ENST00000307767 FAM200AQ8TCP9 573 aa19.24■□□□□ 0.67
TVP23B-201ENST00000307767 ANKRD2Q9GZV1 360 aa19.24■□□□□ 0.67
TVP23B-201ENST00000307767 ZKSCAN5Q9Y2L8 839 aa19.24■□□□□ 0.67
TVP23B-201ENST00000307767 CHD4Q14839 1912 aa19.23■□□□□ 0.67
TVP23B-201ENST00000307767 FGRP09769 529 aa19.23■□□□□ 0.67
TVP23B-201ENST00000307767 HIBADHP31937 336 aaKnown RBP19.23■□□□□ 0.67
TVP23B-201ENST00000307767 HSPA1LP34931 641 aa19.23■□□□□ 0.67
TVP23B-201ENST00000307767 MECOMQ03112 1051 aa19.23■□□□□ 0.67
TVP23B-201ENST00000307767 RRP12Q5JTH9 1297 aaKnown RBP19.23■□□□□ 0.67
TVP23B-201ENST00000307767 NFXL1Q6ZNB6 911 aa19.23■□□□□ 0.67
TVP23B-201ENST00000307767 VPS37DQ86XT2 251 aa19.23■□□□□ 0.67
TVP23B-201ENST00000307767 MTA3Q9BTC8 594 aa19.23■□□□□ 0.67
TVP23B-201ENST00000307767 SLC12A7Q9Y666 1083 aa19.23■□□□□ 0.67
TVP23B-201ENST00000307767 NBPF11Q86T75 865 aa19.23■□□□□ 0.67
TVP23B-201ENST00000307767 BRIP1Q9BX63 1249 aa19.23■□□□□ 0.67
TVP23B-201ENST00000307767 CCDC39Q9UFE4 941 aa19.23■□□□□ 0.67
TVP23B-201ENST00000307767 YEATS4O95619 227 aa19.22■□□□□ 0.67
TVP23B-201ENST00000307767 IFNAR1P17181 557 aa19.22■□□□□ 0.67
TVP23B-201ENST00000307767 PRDX5P30044 214 aa19.22■□□□□ 0.67
TVP23B-201ENST00000307767 GUCY1A2P33402 732 aa19.22■□□□□ 0.67
TVP23B-201ENST00000307767 RFC4P35249 363 aa19.22■□□□□ 0.67
TVP23B-201ENST00000307767 ANO6Q4KMQ2 910 aa19.22■□□□□ 0.67
TVP23B-201ENST00000307767 ADALQ6DHV7 355 aa19.22■□□□□ 0.67
TVP23B-201ENST00000307767 FMR1NBQ8N0W7 255 aaPredicted RBP19.22■□□□□ 0.67
TVP23B-201ENST00000307767 BCL11BQ9C0K0 894 aaPredicted RBP19.22■□□□□ 0.67
TVP23B-201ENST00000307767 CBX8Q9HC52 389 aa19.22■□□□□ 0.67
TVP23B-201ENST00000307767 STK36Q9NRP7 1315 aa19.22■□□□□ 0.67
TVP23B-201ENST00000307767 A0A1W2PQ27 194 aa19.21■□□□□ 0.67
TVP23B-201ENST00000307767 A0A1W2PQ64 194 aa19.21■□□□□ 0.67
TVP23B-201ENST00000307767 A0A1W2PQD8 194 aa19.21■□□□□ 0.67
TVP23B-201ENST00000307767 CDKL5O76039 1030 aa19.21■□□□□ 0.67
TVP23B-201ENST00000307767 ME1P48163 572 aa19.21■□□□□ 0.67
TVP23B-201ENST00000307767 AXDND1Q5T1B0 1012 aaPredicted RBP19.21■□□□□ 0.67
TVP23B-201ENST00000307767 LUZP1Q86V48 1076 aa19.21■□□□□ 0.67
TVP23B-201ENST00000307767 ECM29Q5VYK3 1845 aa19.21■□□□□ 0.67
TVP23B-201ENST00000307767 CCDC69A6NI79 296 aa19.21■□□□□ 0.67
TVP23B-201ENST00000307767 MINDY4BA8MYZ0 360 aa19.21■□□□□ 0.67
TVP23B-201ENST00000307767 ZNF500O60304 480 aaPredicted RBP19.21■□□□□ 0.67
TVP23B-201ENST00000307767 FMNL1O95466 1100 aaPredicted RBP19.21■□□□□ 0.67
TVP23B-201ENST00000307767 IARSP41252 1262 aaKnown RBP19.21■□□□□ 0.67
TVP23B-201ENST00000307767 FAM160A1Q05DH4 1040 aa19.21■□□□□ 0.67
TVP23B-201ENST00000307767 CTR9Q6PD62 1173 aa19.21■□□□□ 0.67
TVP23B-201ENST00000307767 FSIP1Q8NA03 581 aa19.21■□□□□ 0.67
TVP23B-201ENST00000307767 RNF41Q9H4P4 317 aaPredicted RBP19.21■□□□□ 0.67
TVP23B-201ENST00000307767 U2AF2P26368 475 aaKnown RBP eCLIP19.2■□□□□ 0.66
TVP23B-201ENST00000307767 WTAPQ15007 396 aa19.2■□□□□ 0.66
TVP23B-201ENST00000307767 ANO1Q5XXA6 986 aa19.2■□□□□ 0.66
TVP23B-201ENST00000307767 SPTLC2O15270 562 aa19.19■□□□□ 0.66
TVP23B-201ENST00000307767 WDHD1O75717 1129 aaPredicted RBP19.19■□□□□ 0.66
TVP23B-201ENST00000307767 PTPAQ15257 358 aa19.19■□□□□ 0.66
TVP23B-201ENST00000307767 PRR5LQ6MZQ0 368 aa19.19■□□□□ 0.66
TVP23B-201ENST00000307767 MPNDQ8N594 471 aa19.19■□□□□ 0.66
TVP23B-201ENST00000307767 MAP3K14Q99558 947 aa19.19■□□□□ 0.66
TVP23B-201ENST00000307767 TOMM22Q9NS69 142 aa19.19■□□□□ 0.66
TVP23B-201ENST00000307767 DUOX1Q9NRD9 1551 aa19.19■□□□□ 0.66
TVP23B-201ENST00000307767 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.18■□□□□ 0.66
TVP23B-201ENST00000307767 A0A1B0GVL5 298 aa19.18■□□□□ 0.66
TVP23B-201ENST00000307767 NDUFA8P51970 172 aa19.18■□□□□ 0.66
TVP23B-201ENST00000307767 GRAPQ13588 217 aa19.18■□□□□ 0.66
TVP23B-201ENST00000307767 MEX3CQ5U5Q3 659 aaKnown RBP19.18■□□□□ 0.66
TVP23B-201ENST00000307767 CPLX2Q6PUV4 134 aaKnown RBP19.18■□□□□ 0.66
TVP23B-201ENST00000307767 GRAPLQ8TC17 118 aaPredicted RBP19.18■□□□□ 0.66
TVP23B-201ENST00000307767 SHISA4Q96DD7 197 aa19.18■□□□□ 0.66
TVP23B-201ENST00000307767 SLC26A6Q9BXS9 759 aa19.18■□□□□ 0.66
TVP23B-201ENST00000307767 TRPC5Q9UL62 973 aaPredicted RBP19.18■□□□□ 0.66
TVP23B-201ENST00000307767 JAG2Q9Y219 1238 aa19.18■□□□□ 0.66
TVP23B-201ENST00000307767 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.18■□□□□ 0.66
TVP23B-201ENST00000307767 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.18■□□□□ 0.66
TVP23B-201ENST00000307767 GYS1P13807 737 aa19.18■□□□□ 0.66
TVP23B-201ENST00000307767 RCAN1P53805 252 aa19.18■□□□□ 0.66
TVP23B-201ENST00000307767 SLC39A14Q15043 492 aa19.18■□□□□ 0.66
TVP23B-201ENST00000307767 STK38Q15208 465 aa19.18■□□□□ 0.66
TVP23B-201ENST00000307767 ZNF654Q8IZM8 581 aa19.18■□□□□ 0.66
TVP23B-201ENST00000307767 CMTR1Q8N1G2 835 aaKnown RBP19.18■□□□□ 0.66
TVP23B-201ENST00000307767 CRACR2BQ8N4Y2 399 aaPredicted RBP19.18■□□□□ 0.66
TVP23B-201ENST00000307767 CERKQ8TCT0 537 aa19.18■□□□□ 0.66
TVP23B-201ENST00000307767 KCNG4Q8TDN1 519 aa19.18■□□□□ 0.66
TVP23B-201ENST00000307767 MRPS27Q92552 414 aaKnown RBP19.18■□□□□ 0.66
TVP23B-201ENST00000307767 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.18■□□□□ 0.66
TVP23B-201ENST00000307767 DNAJC25Q9H1X3 360 aa19.18■□□□□ 0.66
TVP23B-201ENST00000307767 TNKSO95271 1327 aa19.17■□□□□ 0.66
TVP23B-201ENST00000307767 A0A087WWV3 80 aa19.17■□□□□ 0.66
TVP23B-201ENST00000307767 USP17L12C9JPN9 530 aa19.17■□□□□ 0.66
TVP23B-201ENST00000307767 USP17L21D6R901 530 aa19.17■□□□□ 0.66
TVP23B-201ENST00000307767 MSNP26038 577 aaKnown RBP19.17■□□□□ 0.66
TVP23B-201ENST00000307767 SSRP1Q08945 709 aaKnown RBP19.17■□□□□ 0.66
TVP23B-201ENST00000307767 FUT2Q10981 343 aa19.17■□□□□ 0.66
TVP23B-201ENST00000307767 CHAF1AQ13111 956 aaPredicted RBP19.17■□□□□ 0.66
TVP23B-201ENST00000307767 RTN1Q16799 776 aa19.17■□□□□ 0.66
TVP23B-201ENST00000307767 CCDC73Q6ZRK6 1079 aa19.17■□□□□ 0.66
TVP23B-201ENST00000307767 ENAHQ8N8S7 591 aaPredicted RBP19.17■□□□□ 0.66
TVP23B-201ENST00000307767 FANCBQ8NB91 859 aa19.17■□□□□ 0.66
TVP23B-201ENST00000307767 TDRD7Q8NHU6 1098 aaKnown RBP19.17■□□□□ 0.66
TVP23B-201ENST00000307767 DCP1AQ9NPI6 582 aaPredicted RBP19.17■□□□□ 0.66
TVP23B-201ENST00000307767 CTAGE5O15320 804 aa19.16■□□□□ 0.66
TVP23B-201ENST00000307767 ADRA2BP18089 450 aa19.16■□□□□ 0.66
TVP23B-201ENST00000307767 IQCB1Q15051 598 aa19.16■□□□□ 0.66
TVP23B-201ENST00000307767 GRIK5Q16478 980 aa19.16■□□□□ 0.66
TVP23B-201ENST00000307767 SASS6Q6UVJ0 657 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms