RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 FAM205AQ6ZU69 1335 aa26.13■■□□□ 1.77
SMAD1-201ENST00000302085 GADD45BO75293 160 aaPredicted RBP26.13■■□□□ 1.77
SMAD1-201ENST00000302085 LDHCP07864 332 aa26.13■■□□□ 1.77
SMAD1-201ENST00000302085 FGRP09769 529 aa26.13■■□□□ 1.77
SMAD1-201ENST00000302085 PPP4CP60510 307 aa26.13■■□□□ 1.77
SMAD1-201ENST00000302085 STYK1Q6J9G0 422 aa26.13■■□□□ 1.77
SMAD1-201ENST00000302085 DPP8Q6V1X1 898 aaPredicted RBP26.13■■□□□ 1.77
SMAD1-201ENST00000302085 DEFB132Q7Z7B7 95 aa26.13■■□□□ 1.77
SMAD1-201ENST00000302085 COA1Q9GZY4 146 aa26.13■■□□□ 1.77
SMAD1-201ENST00000302085 H0YIN7 160 aa26.13■■□□□ 1.77
SMAD1-201ENST00000302085 EVX2Q03828 476 aa26.13■■□□□ 1.77
SMAD1-201ENST00000302085 NFXL1Q6ZNB6 911 aa26.13■■□□□ 1.77
SMAD1-201ENST00000302085 ZKSCAN3Q9BRR0 538 aa26.13■■□□□ 1.77
SMAD1-201ENST00000302085 MTA3Q9BTC8 594 aa26.13■■□□□ 1.77
SMAD1-201ENST00000302085 H3BQV1 296 aa26.12■■□□□ 1.77
SMAD1-201ENST00000302085 MFSD14BQ5SR56 506 aa26.12■■□□□ 1.77
SMAD1-201ENST00000302085 IFFO2Q5TF58 517 aa26.12■■□□□ 1.77
SMAD1-201ENST00000302085 FAM173BQ6P4H8 233 aa26.12■■□□□ 1.77
SMAD1-201ENST00000302085 SH3RF3Q8TEJ3 882 aaPredicted RBP26.12■■□□□ 1.77
SMAD1-201ENST00000302085 ZC3H12CQ9C0D7 883 aaKnown RBP26.12■■□□□ 1.77
SMAD1-201ENST00000302085 KIF3AQ9Y496 699 aa26.12■■□□□ 1.77
SMAD1-201ENST00000302085 QSER1Q2KHR3 1735 aa26.12■■□□□ 1.77
SMAD1-201ENST00000302085 SBK1Q52WX2 424 aa26.11■■□□□ 1.77
SMAD1-201ENST00000302085 CAVIN1Q6NZI2 390 aaKnown RBP26.11■■□□□ 1.77
SMAD1-201ENST00000302085 TBC1D22AQ8WUA7 517 aa26.11■■□□□ 1.77
SMAD1-201ENST00000302085 PDGFDQ9GZP0 370 aaPredicted RBP26.11■■□□□ 1.77
SMAD1-201ENST00000302085 MKRN1Q9UHC7 482 aaKnown RBP26.11■■□□□ 1.77
SMAD1-201ENST00000302085 MROH7-TTC4A0A0A0MT08 1334 aa26.11■■□□□ 1.77
SMAD1-201ENST00000302085 CYP2D6P10635 497 aa26.11■■□□□ 1.77
SMAD1-201ENST00000302085 BAG6P46379 1132 aa26.11■■□□□ 1.77
SMAD1-201ENST00000302085 METAP2P50579 478 aaKnown RBP eCLIP26.11■■□□□ 1.77
SMAD1-201ENST00000302085 RESTQ13127 1097 aa26.11■■□□□ 1.77
SMAD1-201ENST00000302085 SF3B2Q13435 895 aaKnown RBP26.11■■□□□ 1.77
SMAD1-201ENST00000302085 ESR2Q92731 530 aa26.11■■□□□ 1.77
SMAD1-201ENST00000302085 FSD2A1L4K1 749 aa26.1■■□□□ 1.77
SMAD1-201ENST00000302085 CPLX1O14810 134 aa26.1■■□□□ 1.77
SMAD1-201ENST00000302085 ZBTB43O43298 467 aa26.1■■□□□ 1.77
SMAD1-201ENST00000302085 BAG3O95817 575 aa26.1■■□□□ 1.77
SMAD1-201ENST00000302085 RXRAP19793 462 aa26.1■■□□□ 1.77
SMAD1-201ENST00000302085 CHRNA5P30532 468 aa26.1■■□□□ 1.77
SMAD1-201ENST00000302085 ADD1P35611 737 aaKnown RBP26.1■■□□□ 1.77
SMAD1-201ENST00000302085 FOSBP53539 338 aa26.1■■□□□ 1.77
SMAD1-201ENST00000302085 RTFDC1Q9BY42 306 aaPredicted RBP26.1■■□□□ 1.77
SMAD1-201ENST00000302085 FIBPO43427 364 aa26.09■■□□□ 1.77
SMAD1-201ENST00000302085 MBD3O95983 291 aa26.09■■□□□ 1.77
SMAD1-201ENST00000302085 CDC27P30260 824 aa26.09■■□□□ 1.77
SMAD1-201ENST00000302085 GTF2IP78347 998 aa26.09■■□□□ 1.77
SMAD1-201ENST00000302085 TMX4Q9H1E5 349 aaPredicted RBP26.09■■□□□ 1.77
SMAD1-201ENST00000302085 FAM217BQ9NTX9 383 aaPredicted RBP26.09■■□□□ 1.77
SMAD1-201ENST00000302085 RBM27Q9P2N5 1060 aaKnown RBP26.09■■□□□ 1.77
SMAD1-201ENST00000302085 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.09■■□□□ 1.77
SMAD1-201ENST00000302085 CCDC69A6NI79 296 aa26.09■■□□□ 1.77
SMAD1-201ENST00000302085 PCP11498 1178 aaKnown RBP26.09■■□□□ 1.77
SMAD1-201ENST00000302085 WTAPQ15007 396 aa26.09■■□□□ 1.77
SMAD1-201ENST00000302085 SART3Q15020 963 aaKnown RBP26.09■■□□□ 1.77
SMAD1-201ENST00000302085 MYL10Q9BUA6 226 aa26.09■■□□□ 1.77
SMAD1-201ENST00000302085 ARPP21Q9UBL0 812 aaPredicted RBP26.09■■□□□ 1.77
SMAD1-201ENST00000302085 SLC12A7Q9Y666 1083 aa26.09■■□□□ 1.77
SMAD1-201ENST00000302085 PRDM1O75626 825 aa26.08■■□□□ 1.77
SMAD1-201ENST00000302085 MICU3Q86XE3 530 aa26.08■■□□□ 1.77
SMAD1-201ENST00000302085 MCM9Q9NXL9 1143 aa26.08■■□□□ 1.77
SMAD1-201ENST00000302085 ORC3Q9UBD5 711 aaPredicted RBP26.08■■□□□ 1.77
SMAD1-201ENST00000302085 MYH2Q9UKX2 1941 aa26.08■■□□□ 1.77
SMAD1-201ENST00000302085 GPR75-ASB3A0A0A6YYF3 556 aa26.07■■□□□ 1.76
SMAD1-201ENST00000302085 SEC23AQ15436 765 aa26.07■■□□□ 1.76
SMAD1-201ENST00000302085 DOK7Q18PE1 504 aa26.07■■□□□ 1.76
SMAD1-201ENST00000302085 FAM163AQ96GL9 167 aaPredicted RBP26.07■■□□□ 1.76
SMAD1-201ENST00000302085 USP17L8P0C7I0 530 aa26.07■■□□□ 1.76
SMAD1-201ENST00000302085 USP5P45974 858 aa26.07■■□□□ 1.76
SMAD1-201ENST00000302085 CCDC144CPQ8IYA2 1237 aa26.07■■□□□ 1.76
SMAD1-201ENST00000302085 TMTC2Q8N394 836 aa26.07■■□□□ 1.76
SMAD1-201ENST00000302085 NOL10Q9BSC4 688 aaKnown RBP26.07■■□□□ 1.76
SMAD1-201ENST00000302085 UBAC1Q9BSL1 405 aa26.07■■□□□ 1.76
SMAD1-201ENST00000302085 ZSCAN16Q9H4T2 348 aaPredicted RBP26.07■■□□□ 1.76
SMAD1-201ENST00000302085 ERICH2A1L162 156 aa26.06■■□□□ 1.76
SMAD1-201ENST00000302085 GOLGA8AA7E2F4 631 aa26.06■■□□□ 1.76
SMAD1-201ENST00000302085 ORC4O43929 436 aa26.06■■□□□ 1.76
SMAD1-201ENST00000302085 BTDP43251 543 aa26.06■■□□□ 1.76
SMAD1-201ENST00000302085 RANBP6O60518 1105 aaKnown RBP26.06■■□□□ 1.76
SMAD1-201ENST00000302085 KRT85P78386 507 aa26.06■■□□□ 1.76
SMAD1-201ENST00000302085 TMEM63CQ9P1W3 806 aa26.06■■□□□ 1.76
SMAD1-201ENST00000302085 SLX4Q8IY92 1834 aa26.05■■□□□ 1.76
SMAD1-201ENST00000302085 GOLGA6L3A6NEY3 463 aa26.05■■□□□ 1.76
SMAD1-201ENST00000302085 GUCY1B3Q02153 619 aa26.05■■□□□ 1.76
SMAD1-201ENST00000302085 NTRK3Q16288 839 aa26.05■■□□□ 1.76
SMAD1-201ENST00000302085 C12orf60Q5U649 245 aa26.05■■□□□ 1.76
SMAD1-201ENST00000302085 SYNE3Q6ZMZ3 975 aa26.05■■□□□ 1.76
SMAD1-201ENST00000302085 GAS2L3Q86XJ1 694 aa26.05■■□□□ 1.76
SMAD1-201ENST00000302085 TGFBRAP1Q8WUH2 860 aa26.05■■□□□ 1.76
SMAD1-201ENST00000302085 CNKSR1Q969H4 720 aa26.05■■□□□ 1.76
SMAD1-201ENST00000302085 ZSCAN10Q96SZ4 725 aaPredicted RBP26.05■■□□□ 1.76
SMAD1-201ENST00000302085 TFIP11Q9UBB9 837 aaKnown RBP26.05■■□□□ 1.76
SMAD1-201ENST00000302085 CSPP1Q1MSJ5 1256 aa26.04■■□□□ 1.76
SMAD1-201ENST00000302085 EYA3Q99504 573 aa26.04■■□□□ 1.76
SMAD1-201ENST00000302085 TNKSO95271 1327 aa26.04■■□□□ 1.76
SMAD1-201ENST00000302085 SLC3A2P08195 630 aaKnown RBP26.04■■□□□ 1.76
SMAD1-201ENST00000302085 UBE2HP62256 183 aa26.04■■□□□ 1.76
SMAD1-201ENST00000302085 ZSCAN23Q3MJ62 389 aa26.04■■□□□ 1.76
SMAD1-201ENST00000302085 CERS5Q8N5B7 392 aa26.04■■□□□ 1.76
SMAD1-201ENST00000302085 C7orf43Q8WVR3 580 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms