RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 PLVAPQ9BX97 442 aa23.41■■□□□ 1.34
LTBP3-201ENST00000301873 VPS54Q9P1Q0 977 aa23.41■■□□□ 1.34
LTBP3-201ENST00000301873 CTNND2Q9UQB3 1225 aa23.41■■□□□ 1.34
LTBP3-201ENST00000301873 GPIHBP1Q8IV16 184 aa23.41■■□□□ 1.34
LTBP3-201ENST00000301873 CCDC87Q9NVE4 849 aa23.41■■□□□ 1.34
LTBP3-201ENST00000301873 RIOK3O14730 519 aaKnown RBP23.41■■□□□ 1.34
LTBP3-201ENST00000301873 ADCK5Q3MIX3 580 aa23.41■■□□□ 1.34
LTBP3-201ENST00000301873 ATRIPQ8WXE1 791 aa23.41■■□□□ 1.34
LTBP3-201ENST00000301873 FERMT2Q96AC1 680 aa23.4■■□□□ 1.34
LTBP3-201ENST00000301873 TRMT44Q8IYL2 757 aaKnown RBP23.4■■□□□ 1.34
LTBP3-201ENST00000301873 NOC4LQ9BVI4 516 aaKnown RBP23.4■■□□□ 1.34
LTBP3-201ENST00000301873 KIF24Q5T7B8 1368 aa23.4■■□□□ 1.34
LTBP3-201ENST00000301873 ACTN2P35609 894 aa23.4■■□□□ 1.34
LTBP3-201ENST00000301873 PLCD1P51178 756 aa23.4■■□□□ 1.34
LTBP3-201ENST00000301873 DCAF17Q5H9S7 520 aaPredicted RBP23.4■■□□□ 1.34
LTBP3-201ENST00000301873 MICALCLQ6ZW33 695 aa23.4■■□□□ 1.34
LTBP3-201ENST00000301873 PKD2L1Q9P0L9 805 aa23.4■■□□□ 1.34
LTBP3-201ENST00000301873 HSPD1P10809 573 aaKnown RBP23.39■■□□□ 1.34
LTBP3-201ENST00000301873 RAPGEF1Q13905 1077 aa23.39■■□□□ 1.34
LTBP3-201ENST00000301873 DNAJC21Q5F1R6 531 aaKnown RBP23.39■■□□□ 1.34
LTBP3-201ENST00000301873 USP37Q86T82 979 aa23.39■■□□□ 1.34
LTBP3-201ENST00000301873 SLAIN2Q9P270 581 aa23.39■■□□□ 1.34
LTBP3-201ENST00000301873 RSPH14Q9UHP6 348 aa23.39■■□□□ 1.34
LTBP3-201ENST00000301873 IBTKQ9P2D0 1353 aaPredicted RBP23.39■■□□□ 1.33
LTBP3-201ENST00000301873 CAPN2P17655 700 aa23.39■■□□□ 1.33
LTBP3-201ENST00000301873 GJC1P36383 396 aa23.39■■□□□ 1.33
LTBP3-201ENST00000301873 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.39■■□□□ 1.33
LTBP3-201ENST00000301873 CSGALNACT2Q8N6G5 542 aa23.39■■□□□ 1.33
LTBP3-201ENST00000301873 MLKLQ8NB16 471 aa23.39■■□□□ 1.33
LTBP3-201ENST00000301873 USP17L12C9JPN9 530 aa23.39■■□□□ 1.33
LTBP3-201ENST00000301873 USP17L21D6R901 530 aa23.39■■□□□ 1.33
LTBP3-201ENST00000301873 NR1I2O75469 434 aa23.39■■□□□ 1.33
LTBP3-201ENST00000301873 ZSWIM6Q9HCJ5 1215 aa23.39■■□□□ 1.33
LTBP3-201ENST00000301873 IFT81Q8WYA0 676 aa23.38■■□□□ 1.33
LTBP3-201ENST00000301873 METP08581 1390 aa23.38■■□□□ 1.33
LTBP3-201ENST00000301873 PPP2R3AQ06190 1150 aa23.38■■□□□ 1.33
LTBP3-201ENST00000301873 FGAP02671 866 aa23.38■■□□□ 1.33
LTBP3-201ENST00000301873 KRT9P35527 623 aa23.38■■□□□ 1.33
LTBP3-201ENST00000301873 FAM47AQ5JRC9 791 aa23.38■■□□□ 1.33
LTBP3-201ENST00000301873 TFAP4Q01664 338 aa23.37■■□□□ 1.33
LTBP3-201ENST00000301873 FAM98CQ17RN3 349 aaKnown RBP23.37■■□□□ 1.33
LTBP3-201ENST00000301873 MAPKAPK5Q8IW41 473 aa23.37■■□□□ 1.33
LTBP3-201ENST00000301873 SYNCQ9H7C4 482 aa23.37■■□□□ 1.33
LTBP3-201ENST00000301873 PARP3Q9Y6F1 533 aa23.37■■□□□ 1.33
LTBP3-201ENST00000301873 TMEM110-MUSTN1A8MSY1 372 aa23.37■■□□□ 1.33
LTBP3-201ENST00000301873 WDHD1O75717 1129 aaPredicted RBP23.37■■□□□ 1.33
LTBP3-201ENST00000301873 CARD6Q9BX69 1037 aa23.37■■□□□ 1.33
LTBP3-201ENST00000301873 CCNT1O60563 726 aaKnown RBP23.36■■□□□ 1.33
LTBP3-201ENST00000301873 SIRT2Q8IXJ6 389 aa23.36■■□□□ 1.33
LTBP3-201ENST00000301873 EYA3Q99504 573 aa23.36■■□□□ 1.33
LTBP3-201ENST00000301873 ERVK-7P63135 1459 aa23.36■■□□□ 1.33
LTBP3-201ENST00000301873 TLDC2A0PJX2 215 aa23.36■■□□□ 1.33
LTBP3-201ENST00000301873 CCDC65Q8IXS2 484 aa23.36■■□□□ 1.33
LTBP3-201ENST00000301873 DBNLQ9UJU6 430 aaKnown RBP23.36■■□□□ 1.33
LTBP3-201ENST00000301873 PRAMEF22A3QJZ6 481 aa23.36■■□□□ 1.33
LTBP3-201ENST00000301873 WDR66Q8TBY9 1149 aa23.36■■□□□ 1.33
LTBP3-201ENST00000301873 RPS8P62241 208 aaKnown RBP23.35■■□□□ 1.33
LTBP3-201ENST00000301873 CCDC155Q8N6L0 562 aa23.35■■□□□ 1.33
LTBP3-201ENST00000301873 TSC1Q92574 1164 aa23.35■■□□□ 1.33
LTBP3-201ENST00000301873 DNAI2Q9GZS0 605 aa23.35■■□□□ 1.33
LTBP3-201ENST00000301873 TLR7Q9NYK1 1049 aaKnown RBP23.35■■□□□ 1.33
LTBP3-201ENST00000301873 YEATS2Q9ULM3 1422 aa23.35■■□□□ 1.33
LTBP3-201ENST00000301873 NLRP12P59046 1061 aa23.35■■□□□ 1.33
LTBP3-201ENST00000301873 PLCB3Q01970 1234 aa23.35■■□□□ 1.33
LTBP3-201ENST00000301873 GPT2Q8TD30 523 aa23.35■■□□□ 1.33
LTBP3-201ENST00000301873 TAB2Q9NYJ8 693 aa23.35■■□□□ 1.33
LTBP3-201ENST00000301873 POSTNQ15063 836 aa23.34■■□□□ 1.33
LTBP3-201ENST00000301873 ERO1AQ96HE7 468 aa23.34■■□□□ 1.33
LTBP3-201ENST00000301873 PUS3Q9BZE2 481 aaKnown RBP23.34■■□□□ 1.33
LTBP3-201ENST00000301873 XPO4Q9C0E2 1151 aaKnown RBP23.34■■□□□ 1.33
LTBP3-201ENST00000301873 PDE6AP16499 860 aa23.34■■□□□ 1.33
LTBP3-201ENST00000301873 VAV2P52735 878 aa23.34■■□□□ 1.33
LTBP3-201ENST00000301873 ZNF654Q8IZM8 581 aa23.34■■□□□ 1.33
LTBP3-201ENST00000301873 FAM212AQ96EL1 285 aa23.34■■□□□ 1.33
LTBP3-201ENST00000301873 VPS18Q9P253 973 aa23.34■■□□□ 1.33
LTBP3-201ENST00000301873 GGA1Q9UJY5 639 aa23.34■■□□□ 1.33
LTBP3-201ENST00000301873 ERVV-2B6SEH9 535 aa23.34■■□□□ 1.33
LTBP3-201ENST00000301873 SDR42E1Q8WUS8 393 aa23.34■■□□□ 1.33
LTBP3-201ENST00000301873 STAP2Q9UGK3 403 aa23.34■■□□□ 1.33
LTBP3-201ENST00000301873 SAMD9Q5K651 1589 aa23.34■■□□□ 1.33
LTBP3-201ENST00000301873 GYG1P46976 350 aa23.34■■□□□ 1.33
LTBP3-201ENST00000301873 RNASE9P60153 205 aaKnown RBP23.34■■□□□ 1.33
LTBP3-201ENST00000301873 RAD51AP2Q09MP3 1159 aa23.34■■□□□ 1.33
LTBP3-201ENST00000301873 ADALQ6DHV7 355 aa23.34■■□□□ 1.33
LTBP3-201ENST00000301873 DYMQ7RTS9 669 aa23.34■■□□□ 1.33
LTBP3-201ENST00000301873 ZYXQ15942 572 aaKnown RBP23.33■■□□□ 1.33
LTBP3-201ENST00000301873 GRIPAP1Q4V328 841 aa23.33■■□□□ 1.33
LTBP3-201ENST00000301873 ZNF274Q96GC6 653 aaPredicted RBP23.33■■□□□ 1.33
LTBP3-201ENST00000301873 HAUS7Q99871 368 aa23.33■■□□□ 1.33
LTBP3-201ENST00000301873 COPRSQ9NQ92 184 aa23.33■■□□□ 1.33
LTBP3-201ENST00000301873 KIAA1468Q9P260 1216 aa23.33■■□□□ 1.33
LTBP3-201ENST00000301873 CHMP2AO43633 222 aa23.33■■□□□ 1.33
LTBP3-201ENST00000301873 ZEB2O60315 1214 aa23.33■■□□□ 1.33
LTBP3-201ENST00000301873 LONRF3Q496Y0 759 aa23.33■■□□□ 1.33
LTBP3-201ENST00000301873 LMBR1Q8WVP7 490 aa23.33■■□□□ 1.33
LTBP3-201ENST00000301873 ARID4AP29374 1257 aaPredicted RBP23.33■■□□□ 1.32
LTBP3-201ENST00000301873 MTX1Q13505 466 aa23.33■■□□□ 1.32
LTBP3-201ENST00000301873 BBXQ8WY36 941 aaPredicted RBP23.33■■□□□ 1.32
LTBP3-201ENST00000301873 JDP2Q8WYK2 163 aa23.33■■□□□ 1.32
LTBP3-201ENST00000301873 CCDC94Q9BW85 323 aaPredicted RBP23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms