RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 AKR1B15C9JRZ8 316 aaPredicted RBP16.75■□□□□ 0.27
COL6A2-201ENST00000300527 CUTAO60888 179 aa16.75■□□□□ 0.27
COL6A2-201ENST00000300527 ADORA1P30542 326 aa16.75■□□□□ 0.27
COL6A2-201ENST00000300527 CCT6AP40227 531 aaKnown RBP16.75■□□□□ 0.27
COL6A2-201ENST00000300527 RRP12Q5JTH9 1297 aaKnown RBP16.75■□□□□ 0.27
COL6A2-201ENST00000300527 SLC35F6Q8N357 371 aa16.75■□□□□ 0.27
COL6A2-201ENST00000300527 STAMQ92783 540 aa16.75■□□□□ 0.27
COL6A2-201ENST00000300527 ZBTB3Q9H5J0 574 aa16.75■□□□□ 0.27
COL6A2-201ENST00000300527 TUBE1Q9UJT0 475 aa16.75■□□□□ 0.27
COL6A2-201ENST00000300527 VSNL1P62760 191 aa16.74■□□□□ 0.27
COL6A2-201ENST00000300527 TAF7LQ5H9L4 462 aa16.74■□□□□ 0.27
COL6A2-201ENST00000300527 RAD9BQ6WBX8 426 aa16.74■□□□□ 0.27
COL6A2-201ENST00000300527 ZMYND10O75800 440 aa16.74■□□□□ 0.27
COL6A2-201ENST00000300527 UTYO14607 1347 aa16.74■□□□□ 0.27
COL6A2-201ENST00000300527 B4E1Z4 1266 aa16.73■□□□□ 0.27
COL6A2-201ENST00000300527 ANTXR2P58335 489 aa16.73■□□□□ 0.27
COL6A2-201ENST00000300527 RBL2Q08999 1139 aa16.73■□□□□ 0.27
COL6A2-201ENST00000300527 BRD3Q15059 726 aa16.73■□□□□ 0.27
COL6A2-201ENST00000300527 TTC31Q49AM3 519 aaPredicted RBP16.73■□□□□ 0.27
COL6A2-201ENST00000300527 ABL1P00519 1130 aa16.73■□□□□ 0.27
COL6A2-201ENST00000300527 IARSP41252 1262 aaKnown RBP16.73■□□□□ 0.27
COL6A2-201ENST00000300527 POSTNQ15063 836 aa16.73■□□□□ 0.27
COL6A2-201ENST00000300527 FCHSD1Q86WN1 690 aa16.73■□□□□ 0.27
COL6A2-201ENST00000300527 AGXT2Q9BYV1 514 aa16.73■□□□□ 0.27
COL6A2-201ENST00000300527 PUS7LQ9H0K6 701 aaKnown RBP16.73■□□□□ 0.27
COL6A2-201ENST00000300527 ANKZF1Q9H8Y5 726 aa16.73■□□□□ 0.27
COL6A2-201ENST00000300527 GPATCH11Q8N954 259 aa16.73■□□□□ 0.27
COL6A2-201ENST00000300527 AGLP35573 1532 aa16.72■□□□□ 0.27
COL6A2-201ENST00000300527 CTAGE9A4FU28 777 aa16.72■□□□□ 0.27
COL6A2-201ENST00000300527 GOLGA8AA7E2F4 631 aa16.72■□□□□ 0.27
COL6A2-201ENST00000300527 NCAPH2Q6IBW4 605 aa16.72■□□□□ 0.27
COL6A2-201ENST00000300527 UBXN6Q9BZV1 441 aa16.72■□□□□ 0.27
COL6A2-201ENST00000300527 CEP126Q9P2H0 1117 aa16.72■□□□□ 0.27
COL6A2-201ENST00000300527 CTAGE15A4D2H0 777 aa16.72■□□□□ 0.27
COL6A2-201ENST00000300527 BTBD18B2RXH4 712 aa16.72■□□□□ 0.27
COL6A2-201ENST00000300527 CTAGE8P0CG41 777 aa16.72■□□□□ 0.27
COL6A2-201ENST00000300527 CSB-PGBD3P0DP91 1061 aa16.72■□□□□ 0.27
COL6A2-201ENST00000300527 CTAGE6Q86UF2 777 aa16.72■□□□□ 0.27
COL6A2-201ENST00000300527 CTAGE4Q8IX94 777 aa16.72■□□□□ 0.27
COL6A2-201ENST00000300527 RAPGEF4Q8WZA2 1011 aa16.72■□□□□ 0.27
COL6A2-201ENST00000300527 CAPZA3Q96KX2 299 aa16.72■□□□□ 0.27
COL6A2-201ENST00000300527 PXDNQ92626 1479 aa16.72■□□□□ 0.27
COL6A2-201ENST00000300527 SETD1AO15047 1707 aaKnown RBP16.72■□□□□ 0.27
COL6A2-201ENST00000300527 E2F4Q16254 413 aa16.72■□□□□ 0.27
COL6A2-201ENST00000300527 BEND6Q5SZJ8 279 aaPredicted RBP16.72■□□□□ 0.27
COL6A2-201ENST00000300527 SLC9C2Q5TAH2 1124 aa16.72■□□□□ 0.27
COL6A2-201ENST00000300527 TEX13AQ9BXU3 409 aaPredicted RBP16.72■□□□□ 0.27
COL6A2-201ENST00000300527 FAM204AQ9H8W3 233 aa16.72■□□□□ 0.27
COL6A2-201ENST00000300527 CDC23Q9UJX2 597 aa16.72■□□□□ 0.27
COL6A2-201ENST00000300527 IDH1O75874 414 aaKnown RBP16.71■□□□□ 0.27
COL6A2-201ENST00000300527 ZAP70P43403 619 aa16.71■□□□□ 0.27
COL6A2-201ENST00000300527 CASP8Q14790 479 aa16.71■□□□□ 0.27
COL6A2-201ENST00000300527 USP49Q70CQ1 688 aa16.71■□□□□ 0.27
COL6A2-201ENST00000300527 KRI1Q8N9T8 703 aaKnown RBP16.71■□□□□ 0.27
COL6A2-201ENST00000300527 NKX2-3Q8TAU0 364 aa16.71■□□□□ 0.27
COL6A2-201ENST00000300527 RIN2Q8WYP3 895 aaPredicted RBP16.71■□□□□ 0.27
COL6A2-201ENST00000300527 IVLP07476 585 aa16.71■□□□□ 0.27
COL6A2-201ENST00000300527 CDC25AP30304 524 aa16.71■□□□□ 0.27
COL6A2-201ENST00000300527 SART3Q15020 963 aaKnown RBP16.71■□□□□ 0.27
COL6A2-201ENST00000300527 CEP112Q8N8E3 955 aa16.71■□□□□ 0.27
COL6A2-201ENST00000300527 ZKSCAN3Q9BRR0 538 aa16.71■□□□□ 0.27
COL6A2-201ENST00000300527 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.71■□□□□ 0.27
COL6A2-201ENST00000300527 CRYBG1Q9Y4K1 1723 aa16.71■□□□□ 0.27
COL6A2-201ENST00000300527 CACNA1FO60840 1977 aa16.71■□□□□ 0.26
COL6A2-201ENST00000300527 EIF3CLB5ME19 914 aaKnown RBP16.71■□□□□ 0.26
COL6A2-201ENST00000300527 ENC1O14682 589 aa16.71■□□□□ 0.26
COL6A2-201ENST00000300527 CASP14P31944 242 aa16.71■□□□□ 0.26
COL6A2-201ENST00000300527 SCARF1Q14162 830 aa16.71■□□□□ 0.26
COL6A2-201ENST00000300527 NOA1Q8NC60 698 aaKnown RBP16.71■□□□□ 0.26
COL6A2-201ENST00000300527 EIF3CQ99613 913 aaKnown RBP16.71■□□□□ 0.26
COL6A2-201ENST00000300527 ADGRG1Q9Y653 693 aa16.71■□□□□ 0.26
COL6A2-201ENST00000300527 NCAPD2Q15021 1401 aa16.7■□□□□ 0.26
COL6A2-201ENST00000300527 RICTORQ6R327 1708 aa16.7■□□□□ 0.26
COL6A2-201ENST00000300527 GPAA1O43292 621 aa16.7■□□□□ 0.26
COL6A2-201ENST00000300527 RESP18Q5W5W9 173 aa16.7■□□□□ 0.26
COL6A2-201ENST00000300527 NUTM2AQ8IVF1 878 aaPredicted RBP16.7■□□□□ 0.26
COL6A2-201ENST00000300527 SLF1Q9BQI6 1058 aa16.7■□□□□ 0.26
COL6A2-201ENST00000300527 GUCA1BQ9UMX6 200 aa16.7■□□□□ 0.26
COL6A2-201ENST00000300527 FKBP15Q5T1M5 1219 aa16.7■□□□□ 0.26
COL6A2-201ENST00000300527 ATG9AQ7Z3C6 839 aa16.7■□□□□ 0.26
COL6A2-201ENST00000300527 MB21D2Q8IYB1 491 aaPredicted RBP16.7■□□□□ 0.26
COL6A2-201ENST00000300527 AKAP2Q9Y2D5 859 aa16.7■□□□□ 0.26
COL6A2-201ENST00000300527 PALLDQ8WX93 1383 aa16.69■□□□□ 0.26
COL6A2-201ENST00000300527 SAFBQ15424 915 aaKnown RBP eCLIP16.69■□□□□ 0.26
COL6A2-201ENST00000300527 PAXIP1Q6ZW49 1069 aaPredicted RBP16.69■□□□□ 0.26
COL6A2-201ENST00000300527 GSPT2Q8IYD1 628 aaKnown RBP16.69■□□□□ 0.26
COL6A2-201ENST00000300527 NWD1Q149M9 1564 aa16.69■□□□□ 0.26
COL6A2-201ENST00000300527 ZBTB43O43298 467 aa16.69■□□□□ 0.26
COL6A2-201ENST00000300527 PTPAQ15257 358 aa16.69■□□□□ 0.26
COL6A2-201ENST00000300527 CYB5R4Q7L1T6 521 aa16.69■□□□□ 0.26
COL6A2-201ENST00000300527 MICALL1Q8N3F8 863 aa16.69■□□□□ 0.26
COL6A2-201ENST00000300527 NUP133Q8WUM0 1156 aa16.69■□□□□ 0.26
COL6A2-201ENST00000300527 HPSEQ9Y251 543 aa16.69■□□□□ 0.26
COL6A2-201ENST00000300527 PACS2Q86VP3 889 aa16.69■□□□□ 0.26
COL6A2-201ENST00000300527 NUP88Q99567 741 aaPredicted RBP16.69■□□□□ 0.26
COL6A2-201ENST00000300527 VPS16Q9H269 839 aa16.69■□□□□ 0.26
COL6A2-201ENST00000300527 TFR2Q9UP52 801 aa16.69■□□□□ 0.26
COL6A2-201ENST00000300527 CHD2O14647 1828 aaKnown RBP16.68■□□□□ 0.26
COL6A2-201ENST00000300527 FMN2Q9NZ56 1722 aa16.68■□□□□ 0.26
COL6A2-201ENST00000300527 GCP02774 474 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms